EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000007862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3300 bases
Position: chrreftig_24:1027198-1030497
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013411	zf-met	PF12874.7	8.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013566	-	992	-	ENSCSAVP00000013414	323 (aa)	-	H2Z752
ENSCSAVT00000013565	-	954	-	ENSCSAVP00000013413	292 (aa)	-	H2Z751
ENSCSAVT00000013564	-	1191	-	ENSCSAVP00000013412	371 (aa)	-	H2Z750
ENSCSAVT00000013563	-	1281	-	ENSCSAVP00000013411	376 (aa)	-	H2Z749

Gene Model

Click here to download ENSCSAVG00000007862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007862's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007862	-	59	83.636	ENSG00000104897	SF3A2	100	86.667	Homo_sapiens
ENSCSAVG00000007862	-	64	79.079	ENSAPOG00000003916	sf3a2	80	78.571	Acanthochromis_polyacanthus
ENSCSAVG00000007862	-	64	80.753	ENSACIG00000018153	sf3a2	81	79.832	Amphilophus_citrinellus
ENSCSAVG00000007862	-	64	78.661	ENSAOCG00000015960	sf3a2	80	78.571	Amphiprion_ocellaris
ENSCSAVG00000007862	-	64	78.661	ENSAPEG00000012336	sf3a2	80	78.571	Amphiprion_percula
ENSCSAVG00000007862	-	64	79.079	ENSATEG00000015449	sf3a2	80	78.571	Anabas_testudineus
ENSCSAVG00000007862	-	64	77.344	ENSACLG00000002356	sf3a2	81	79.832	Astatotilapia_calliptera
ENSCSAVG00000007862	-	64	78.243	ENSAMXG00000032428	sf3a2	79	78.571	Astyanax_mexicanus
ENSCSAVG00000007862	-	57	78.140	WBGene00008683	repo-1	96	78.140	Caenorhabditis_elegans
ENSCSAVG00000007862	-	59	83.636	ENSCCAG00000009812	SF3A2	87	84.324	Cebus_capucinus
ENSCSAVG00000007862	-	60	83.482	ENSCPBG00000018569	SF3A2	71	83.482	Chrysemys_picta_bellii
ENSCSAVG00000007862	-	59	83.636	ENSCGRG00000011089	Sf3a2	100	81.443	Cricetulus_griseus_crigri
ENSCSAVG00000007862	-	77	69.896	ENSCSEG00000014308	sf3a2	84	79.412	Cynoglossus_semilaevis
ENSCSAVG00000007862	-	57	86.047	ENSCVAG00000021349	sf3a2	91	71.583	Cyprinodon_variegatus
ENSCSAVG00000007862	-	57	85.581	ENSDARG00000021107	sf3a2	77	85.581	Danio_rerio
ENSCSAVG00000007862	-	63	77.215	FBgn0036314	Sf3a2	84	81.614	Drosophila_melanogaster
ENSCSAVG00000007862	-	59	83.182	ENSFCAG00000030476	SF3A2	50	83.486	Felis_catus
ENSCSAVG00000007862	-	57	86.047	ENSFHEG00000002392	sf3a2	73	86.047	Fundulus_heteroclitus
ENSCSAVG00000007862	-	64	79.079	ENSGMOG00000012186	sf3a2	79	78.992	Gadus_morhua
ENSCSAVG00000007862	-	57	85.116	ENSGALG00000021679	SF3A2	71	83.111	Gallus_gallus
ENSCSAVG00000007862	-	57	86.047	ENSGAFG00000008478	sf3a2	73	86.047	Gambusia_affinis
ENSCSAVG00000007862	-	73	71.739	ENSGACG00000015255	sf3a2	82	78.992	Gasterosteus_aculeatus
ENSCSAVG00000007862	-	64	77.344	ENSHBUG00000021796	sf3a2	81	79.832	Haplochromis_burtoni
ENSCSAVG00000007862	-	59	83.636	ENSHGLG00000015102	SF3A2	88	84.699	Heterocephalus_glaber_female
ENSCSAVG00000007862	-	59	83.636	ENSHGLG00100000418	SF3A2	88	84.699	Heterocephalus_glaber_male
ENSCSAVG00000007862	-	63	74.806	ENSHCOG00000001223	sf3a2	82	78.571	Hippocampus_comes
ENSCSAVG00000007862	-	64	78.243	ENSIPUG00000019071	sf3a2	80	78.151	Ictalurus_punctatus
ENSCSAVG00000007862	-	59	83.636	ENSSTOG00000007495	SF3A2	90	78.689	Ictidomys_tridecemlineatus
ENSCSAVG00000007862	-	60	82.589	ENSJJAG00000010635	Sf3a2	96	83.784	Jaculus_jaculus
ENSCSAVG00000007862	-	64	79.583	ENSKMAG00000006295	sf3a2	76	83.628	Kryptolebias_marmoratus
ENSCSAVG00000007862	-	64	79.498	ENSLBEG00000000677	sf3a2	80	78.992	Labrus_bergylta
ENSCSAVG00000007862	-	57	85.116	ENSLACG00000008744	SF3A2	87	74.265	Latimeria_chalumnae
ENSCSAVG00000007862	-	60	82.589	ENSLOCG00000005835	sf3a2	72	82.589	Lepisosteus_oculatus
ENSCSAVG00000007862	-	59	78.151	ENSMAMG00000009881	sf3a2	76	82.589	Mastacembelus_armatus
ENSCSAVG00000007862	-	64	77.344	ENSMZEG00005025609	sf3a2	81	79.832	Maylandia_zebra
ENSCSAVG00000007862	-	57	85.116	ENSMGAG00000001950	SF3A2	71	83.111	Meleagris_gallopavo
ENSCSAVG00000007862	-	64	71.488	ENSMMOG00000010657	sf3a2	76	76.852	Mola_mola
ENSCSAVG00000007862	-	64	79.916	ENSMALG00000020442	sf3a2	80	78.992	Monopterus_albus
ENSCSAVG00000007862	-	59	83.636	MGP_CAROLIEiJ_G0015602	-	94	84.615	Mus_caroli
ENSCSAVG00000007862	-	59	83.636	ENSMUSG00000020211	Sf3a2	94	84.615	Mus_musculus
ENSCSAVG00000007862	-	59	83.636	MGP_PahariEiJ_G0031015	-	94	84.615	Mus_pahari
ENSCSAVG00000007862	-	59	83.636	MGP_SPRETEiJ_G0016420	-	94	84.615	Mus_spretus
ENSCSAVG00000007862	-	64	80.335	ENSNBRG00000019872	sf3a2	81	79.832	Neolamprologus_brichardi
ENSCSAVG00000007862	-	50	82.888	ENSODEG00000013722	-	100	82.888	Octodon_degus
ENSCSAVG00000007862	-	64	80.335	ENSONIG00000010198	sf3a2	90	71.277	Oreochromis_niloticus
ENSCSAVG00000007862	-	55	83.495	ENSOANG00000013649	-	98	83.495	Ornithorhynchus_anatinus
ENSCSAVG00000007862	-	63	79.832	ENSORLG00000015301	sf3a2	74	85.581	Oryzias_latipes
ENSCSAVG00000007862	-	63	79.832	ENSORLG00020017235	sf3a2	74	85.581	Oryzias_latipes_hni
ENSCSAVG00000007862	-	63	79.832	ENSORLG00015017116	sf3a2	74	85.581	Oryzias_latipes_hsok
ENSCSAVG00000007862	-	63	79.412	ENSOMEG00000020860	sf3a2	74	85.116	Oryzias_melastigma
ENSCSAVG00000007862	-	59	83.636	ENSOARG00000014357	SF3A2	53	83.945	Ovis_aries
ENSCSAVG00000007862	-	75	69.258	ENSPKIG00000009487	sf3a2	71	83.036	Paramormyrops_kingsleyae
ENSCSAVG00000007862	-	60	82.743	ENSPSIG00000010839	SF3A2	71	82.743	Pelodiscus_sinensis
ENSCSAVG00000007862	-	57	85.581	ENSPMGG00000017249	sf3a2	82	83.019	Periophthalmus_magnuspinnatus
ENSCSAVG00000007862	-	57	86.047	ENSPFOG00000015945	sf3a2	73	86.047	Poecilia_formosa
ENSCSAVG00000007862	-	57	86.047	ENSPLAG00000010052	sf3a2	73	86.047	Poecilia_latipinna
ENSCSAVG00000007862	-	57	86.047	ENSPMEG00000000184	sf3a2	73	86.047	Poecilia_mexicana
ENSCSAVG00000007862	-	57	86.047	ENSPREG00000017808	sf3a2	73	86.047	Poecilia_reticulata
ENSCSAVG00000007862	-	64	77.344	ENSPNYG00000006928	sf3a2	81	79.832	Pundamilia_nyererei
ENSCSAVG00000007862	-	64	78.661	ENSPNAG00000027582	sf3a2	79	78.571	Pygocentrus_nattereri
ENSCSAVG00000007862	-	57	84.651	ENSSHAG00000011677	-	91	82.589	Sarcophilus_harrisii
ENSCSAVG00000007862	-	51	76.963	ENSSHAG00000011646	-	71	75.000	Sarcophilus_harrisii
ENSCSAVG00000007862	-	79	65.924	ENSSFOG00015010920	sf3a2	64	83.036	Scleropages_formosus
ENSCSAVG00000007862	-	64	79.498	ENSSMAG00000002629	sf3a2	83	78.333	Scophthalmus_maximus
ENSCSAVG00000007862	-	64	79.498	ENSSDUG00000015810	sf3a2	82	78.992	Seriola_dumerili
ENSCSAVG00000007862	-	64	79.916	ENSSLDG00000010874	sf3a2	95	63.009	Seriola_lalandi_dorsalis
ENSCSAVG00000007862	-	74	72.043	ENSSPAG00000004960	sf3a2	84	75.904	Stegastes_partitus
ENSCSAVG00000007862	-	55	84.878	ENSTGUG00000000305	SF3A2	100	84.878	Taeniopygia_guttata
ENSCSAVG00000007862	-	60	78.423	ENSTRUG00000009045	sf3a2	98	70.175	Takifugu_rubripes
ENSCSAVG00000007862	-	60	78.423	ENSTNIG00000015318	sf3a2	78	83.482	Tetraodon_nigroviridis
ENSCSAVG00000007862	-	64	81.172	ENSXETG00000024943	sf3a2	53	84.404	Xenopus_tropicalis
ENSCSAVG00000007862	-	57	86.047	ENSXCOG00000008222	sf3a2	73	86.047	Xiphophorus_couchianus
ENSCSAVG00000007862	-	57	86.047	ENSXMAG00000029068	sf3a2	73	86.047	Xiphophorus_maculatus