EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000007918 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1221 bases
Position: chrreftig_49:783051-784271
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	1	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	2	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	3	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	4	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	5	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	6	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	7	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	8	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	9	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	10	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	11	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	12	13
ENSCSAVP00000013506	zf-C2H2	PF00096.26	1.3e-62	13	13
ENSCSAVP00000013506	zf-met	PF12874.7	1.9e-19	1	3
ENSCSAVP00000013506	zf-met	PF12874.7	1.9e-19	2	3
ENSCSAVP00000013506	zf-met	PF12874.7	1.9e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013662	-	1221	-	ENSCSAVP00000013506	407 (aa)	-	H2Z7E4

Gene Model

Click here to download ENSCSAVG00000007918's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000007918's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000007918	-	97	39.098	ENSCSAVG00000009739	-	61	39.098
ENSCSAVG00000007918	-	100	42.581	ENSCSAVG00000005904	-	96	42.581
ENSCSAVG00000007918	-	99	78.125	ENSCSAVG00000003690	-	100	78.125
ENSCSAVG00000007918	-	100	66.499	ENSCSAVG00000001834	-	100	66.499
ENSCSAVG00000007918	-	100	69.630	ENSCSAVG00000001830	-	100	69.630
ENSCSAVG00000007918	-	99	50.253	ENSCSAVG00000004678	-	99	50.253
ENSCSAVG00000007918	-	100	65.241	ENSCSAVG00000001989	-	100	64.706
ENSCSAVG00000007918	-	99	43.421	ENSCSAVG00000004543	-	99	36.986
ENSCSAVG00000007918	-	100	47.748	ENSCSAVG00000003895	-	99	47.748
ENSCSAVG00000007918	-	100	53.465	ENSCSAVG00000006608	-	100	53.465
ENSCSAVG00000007918	-	100	60.150	ENSCSAVG00000000293	-	99	60.150
ENSCSAVG00000007918	-	100	41.489	ENSCSAVG00000006028	-	85	41.489
ENSCSAVG00000007918	-	100	46.597	ENSCSAVG00000009574	-	99	46.597
ENSCSAVG00000007918	-	100	42.949	ENSCSAVG00000001949	-	96	42.949
ENSCSAVG00000007918	-	100	65.123	ENSCSAVG00000000673	-	100	65.123
ENSCSAVG00000007918	-	100	62.170	ENSCSAVG00000000649	-	99	62.532
ENSCSAVG00000007918	-	97	48.276	ENSCSAVG00000011146	-	82	48.276
ENSCSAVG00000007918	-	100	68.687	ENSCSAVG00000000655	-	99	68.687
ENSCSAVG00000007918	-	100	32.370	ENSCSAVG00000006729	-	68	36.029
ENSCSAVG00000007918	-	97	53.226	ENSCSAVG00000010156	-	99	53.226
ENSCSAVG00000007918	-	100	55.037	ENSCSAVG00000006141	-	100	55.668
ENSCSAVG00000007918	-	100	59.813	ENSCSAVG00000001808	-	100	59.813
ENSCSAVG00000007918	-	100	34.242	ENSCSAVG00000009217	-	99	34.242
ENSCSAVG00000007918	-	99	34.988	ENSCSAVG00000006745	-	98	34.988
ENSCSAVG00000007918	-	100	66.497	ENSCSAVG00000009953	-	99	66.497
ENSCSAVG00000007918	-	100	35.870	ENSCSAVG00000005896	-	74	35.870
ENSCSAVG00000007918	-	100	61.688	ENSCSAVG00000002179	-	99	61.631
ENSCSAVG00000007918	-	100	68.939	ENSCSAVG00000000690	-	95	68.939
ENSCSAVG00000007918	-	100	70.886	ENSCSAVG00000008862	-	100	70.886
ENSCSAVG00000007918	-	100	64.000	ENSCSAVG00000004762	-	100	64.000
ENSCSAVG00000007918	-	100	66.313	ENSCSAVG00000004499	-	100	66.313
ENSCSAVG00000007918	-	97	41.860	ENSCSAVG00000009819	-	72	41.860
ENSCSAVG00000007918	-	100	62.205	ENSCSAVG00000000520	-	100	62.205
ENSCSAVG00000007918	-	100	65.426	ENSCSAVG00000004703	-	100	65.181
ENSCSAVG00000007918	-	98	39.506	ENSCSAVG00000011749	-	95	39.506
ENSCSAVG00000007918	-	100	65.021	ENSCSAVG00000009583	-	100	63.291
ENSCSAVG00000007918	-	100	39.782	ENSCSAVG00000006650	-	100	42.361
ENSCSAVG00000007918	-	100	49.370	ENSCSAVG00000007589	-	100	49.144
ENSCSAVG00000007918	-	100	68.056	ENSCSAVG00000000642	-	100	68.037
ENSCSAVG00000007918	-	100	56.359	ENSCSAVG00000010960	-	100	54.007

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000007918	-	100	38.168	ENSAPEG00000021575	-	59	38.168	Amphiprion_percula
ENSCSAVG00000007918	-	97	40.885	ENSACLG00000017925	-	65	42.262	Astatotilapia_calliptera
ENSCSAVG00000007918	-	100	54.762	ENSAMXG00000037709	-	87	54.762	Astyanax_mexicanus
ENSCSAVG00000007918	-	99	54.723	ENSAMXG00000041609	-	91	54.723	Astyanax_mexicanus
ENSCSAVG00000007918	-	100	41.896	ENSHBUG00000012007	-	73	40.391	Haplochromis_burtoni
ENSCSAVG00000007918	-	100	45.161	ENSHBUG00000002307	-	73	44.860	Haplochromis_burtoni
ENSCSAVG00000007918	-	97	41.146	ENSMZEG00005024424	-	65	42.857	Maylandia_zebra
ENSCSAVG00000007918	-	99	38.811	ENSOANG00000005971	-	69	39.510	Ornithorhynchus_anatinus
ENSCSAVG00000007918	-	100	43.462	ENSPMEG00000014701	-	70	43.462	Poecilia_mexicana
ENSCSAVG00000007918	-	100	38.642	ENSSDUG00000002174	-	67	38.710	Seriola_dumerili
ENSCSAVG00000007918	-	99	48.289	ENSSLDG00000010390	-	91	48.289	Seriola_lalandi_dorsalis
ENSCSAVG00000007918	-	100	38.642	ENSSLDG00000002776	-	67	38.710	Seriola_lalandi_dorsalis
ENSCSAVG00000007918	-	100	40.000	ENSSPAG00000008958	-	92	39.841	Stegastes_partitus
ENSCSAVG00000007918	-	100	47.075	ENSTGUG00000015090	-	99	47.075	Taeniopygia_guttata