EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008018 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2566 bases
Position: chrreftig_19:1329213-1331778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013666	FRG1	PF06229.12	2.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013823	-	582	-	ENSCSAVP00000013666	183 (aa)	-	H2Z7V4

Gene Model

Click here to download ENSCSAVG00000008018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008018	-	100	48.370	ENSG00000109536	FRG1	97	55.752	Homo_sapiens
ENSCSAVG00000008018	-	100	50.820	ENSAPOG00000001060	frg1	52	54.962	Acanthochromis_polyacanthus
ENSCSAVG00000008018	-	100	48.370	ENSAMEG00000013503	FRG1	51	54.545	Ailuropoda_melanoleuca
ENSCSAVG00000008018	-	75	52.899	ENSACIG00000022283	frg1	59	54.962	Amphilophus_citrinellus
ENSCSAVG00000008018	-	75	53.623	ENSAOCG00000024240	frg1	51	54.962	Amphiprion_ocellaris
ENSCSAVG00000008018	-	100	50.820	ENSAPEG00000002486	frg1	52	54.962	Amphiprion_percula
ENSCSAVG00000008018	-	72	52.672	ENSATEG00000010414	frg1	55	52.672	Anabas_testudineus
ENSCSAVG00000008018	-	100	48.634	ENSAPLG00000007785	-	51	53.435	Anas_platyrhynchos
ENSCSAVG00000008018	-	100	50.820	ENSACAG00000006877	-	51	58.462	Anolis_carolinensis
ENSCSAVG00000008018	-	100	49.457	ENSANAG00000020876	FRG1	51	54.545	Aotus_nancymaae
ENSCSAVG00000008018	-	100	43.716	ENSACLG00000027065	frg1	55	53.383	Astatotilapia_calliptera
ENSCSAVG00000008018	-	100	48.370	ENSAMXG00000032700	frg1	52	53.030	Astyanax_mexicanus
ENSCSAVG00000008018	-	100	48.370	ENSBTAG00000007089	FRG1	51	54.839	Bos_taurus
ENSCSAVG00000008018	-	99	41.753	WBGene00014177	frg-1	54	43.919	Caenorhabditis_elegans
ENSCSAVG00000008018	-	100	49.457	ENSCJAG00000011272	FRG1	55	56.881	Callithrix_jacchus
ENSCSAVG00000008018	-	100	48.370	ENSCAFG00000007135	FRG1	52	54.545	Canis_familiaris
ENSCSAVG00000008018	-	70	54.615	ENSCAFG00020000082	-	52	54.615	Canis_lupus_dingo
ENSCSAVG00000008018	-	100	48.370	ENSCHIG00000011585	-	51	54.545	Capra_hircus
ENSCSAVG00000008018	-	67	44.715	ENSTSYG00000031599	-	51	44.715	Carlito_syrichta
ENSCSAVG00000008018	-	78	51.049	ENSCAPG00000016056	-	54	53.788	Cavia_aperea
ENSCSAVG00000008018	-	72	53.788	ENSCPOG00000022277	-	51	53.788	Cavia_porcellus
ENSCSAVG00000008018	-	100	49.457	ENSCCAG00000024627	FRG1	51	54.545	Cebus_capucinus
ENSCSAVG00000008018	-	100	48.913	ENSCATG00000029230	FRG1	51	55.303	Cercocebus_atys
ENSCSAVG00000008018	-	100	44.211	ENSCLAG00000004960	-	58	49.275	Chinchilla_lanigera
ENSCSAVG00000008018	-	72	53.788	ENSCLAG00000000370	-	52	53.333	Chinchilla_lanigera
ENSCSAVG00000008018	-	72	48.485	ENSCLAG00000009263	-	58	48.485	Chinchilla_lanigera
ENSCSAVG00000008018	-	100	48.913	ENSCSAG00000002899	FRG1	51	55.303	Chlorocebus_sabaeus
ENSCSAVG00000008018	-	72	53.030	ENSCSAG00000017729	-	61	53.030	Chlorocebus_sabaeus
ENSCSAVG00000008018	-	78	52.817	ENSCPBG00000009211	-	51	55.725	Chrysemys_picta_bellii
ENSCSAVG00000008018	-	100	83.060	ENSCING00000005161	-	68	83.060	Ciona_intestinalis
ENSCSAVG00000008018	-	100	48.913	ENSCANG00000020991	FRG1	51	55.303	Colobus_angolensis_palliatus
ENSCSAVG00000008018	-	100	47.826	ENSCGRG00001014998	Frg1	60	53.788	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008018	-	100	47.826	ENSCGRG00000011860	-	51	53.788	Cricetulus_griseus_crigri
ENSCSAVG00000008018	-	100	46.995	ENSCSEG00000015950	frg1	53	53.077	Cynoglossus_semilaevis
ENSCSAVG00000008018	-	100	48.087	ENSCVAG00000009985	frg1	54	54.887	Cyprinodon_variegatus
ENSCSAVG00000008018	-	100	48.087	ENSDARG00000056504	frg1	69	55.000	Danio_rerio
ENSCSAVG00000008018	-	100	48.370	ENSDNOG00000014886	FRG1	51	54.545	Dasypus_novemcinctus
ENSCSAVG00000008018	-	72	55.303	ENSDORG00000016190	Frg1	55	55.303	Dipodomys_ordii
ENSCSAVG00000008018	-	72	44.697	FBgn0036964	FRG1	52	43.796	Drosophila_melanogaster
ENSCSAVG00000008018	-	100	47.283	ENSETEG00000012349	-	51	53.788	Echinops_telfairi
ENSCSAVG00000008018	-	66	41.667	ENSEBUG00000014053	frg1	61	42.478	Eptatretus_burgeri
ENSCSAVG00000008018	-	100	49.457	ENSEASG00005017497	FRG1	51	54.545	Equus_asinus_asinus
ENSCSAVG00000008018	-	100	49.457	ENSECAG00000003122	FRG1	51	54.545	Equus_caballus
ENSCSAVG00000008018	-	100	49.727	ENSELUG00000021712	frg1	68	48.087	Esox_lucius
ENSCSAVG00000008018	-	100	48.370	ENSFCAG00000025737	FRG1	51	54.545	Felis_catus
ENSCSAVG00000008018	-	75	51.825	ENSFALG00000011231	-	51	53.435	Ficedula_albicollis
ENSCSAVG00000008018	-	100	48.913	ENSFDAG00000000962	-	51	53.788	Fukomys_damarensis
ENSCSAVG00000008018	-	100	46.486	ENSFDAG00000012697	-	61	50.000	Fukomys_damarensis
ENSCSAVG00000008018	-	100	45.902	ENSFHEG00000010540	frg1	52	52.672	Fundulus_heteroclitus
ENSCSAVG00000008018	-	72	54.198	ENSGMOG00000000867	frg1	51	54.198	Gadus_morhua
ENSCSAVG00000008018	-	100	48.087	ENSGALG00000013590	-	51	52.672	Gallus_gallus
ENSCSAVG00000008018	-	100	46.995	ENSGAFG00000013855	frg1	63	51.908	Gambusia_affinis
ENSCSAVG00000008018	-	100	51.087	ENSGACG00000016888	frg1	51	58.779	Gasterosteus_aculeatus
ENSCSAVG00000008018	-	100	48.634	ENSGAGG00000025012	-	51	55.725	Gopherus_agassizii
ENSCSAVG00000008018	-	72	50.758	ENSGGOG00000012888	-	67	50.758	Gorilla_gorilla
ENSCSAVG00000008018	-	100	46.995	ENSHBUG00000010667	frg1	55	53.383	Haplochromis_burtoni
ENSCSAVG00000008018	-	100	49.457	ENSHGLG00000005601	FRG1	51	53.788	Heterocephalus_glaber_female
ENSCSAVG00000008018	-	72	50.000	ENSHGLG00000020943	-	51	50.000	Heterocephalus_glaber_female
ENSCSAVG00000008018	-	100	42.391	ENSHGLG00000001211	-	53	46.970	Heterocephalus_glaber_female
ENSCSAVG00000008018	-	100	42.935	ENSHGLG00100010674	-	53	47.727	Heterocephalus_glaber_male
ENSCSAVG00000008018	-	72	50.000	ENSHGLG00100021211	-	51	50.000	Heterocephalus_glaber_male
ENSCSAVG00000008018	-	100	38.251	ENSHGLG00100015285	-	53	44.275	Heterocephalus_glaber_male
ENSCSAVG00000008018	-	100	50.000	ENSHGLG00100016261	-	51	54.545	Heterocephalus_glaber_male
ENSCSAVG00000008018	-	72	55.303	ENSHCOG00000000224	frg1	56	55.303	Hippocampus_comes
ENSCSAVG00000008018	-	100	47.283	ENSIPUG00000022716	frg1	54	52.273	Ictalurus_punctatus
ENSCSAVG00000008018	-	100	48.913	ENSSTOG00000002857	-	51	55.303	Ictidomys_tridecemlineatus
ENSCSAVG00000008018	-	72	53.788	ENSJJAG00000020625	Frg1	51	53.788	Jaculus_jaculus
ENSCSAVG00000008018	-	72	55.725	ENSKMAG00000005841	frg1	51	55.725	Kryptolebias_marmoratus
ENSCSAVG00000008018	-	100	45.902	ENSLBEG00000001466	frg1	68	51.538	Labrus_bergylta
ENSCSAVG00000008018	-	100	50.273	ENSLACG00000010243	frg1	68	48.634	Latimeria_chalumnae
ENSCSAVG00000008018	-	100	50.820	ENSLOCG00000013868	frg1	51	55.725	Lepisosteus_oculatus
ENSCSAVG00000008018	-	100	47.283	ENSLAFG00000011191	FRG1	72	54.545	Loxodonta_africana
ENSCSAVG00000008018	-	100	48.913	ENSMFAG00000031178	FRG1	51	55.303	Macaca_fascicularis
ENSCSAVG00000008018	-	70	48.485	ENSMFAG00000042873	-	53	48.485	Macaca_fascicularis
ENSCSAVG00000008018	-	70	46.970	ENSMMUG00000047496	-	56	46.970	Macaca_mulatta
ENSCSAVG00000008018	-	100	48.913	ENSMMUG00000001824	FRG1	57	55.385	Macaca_mulatta
ENSCSAVG00000008018	-	100	48.913	ENSMLEG00000028881	FRG1	51	55.303	Mandrillus_leucophaeus
ENSCSAVG00000008018	-	72	54.962	ENSMAMG00000012406	frg1	51	54.962	Mastacembelus_armatus
ENSCSAVG00000008018	-	100	46.995	ENSMZEG00005007549	frg1	55	53.383	Maylandia_zebra
ENSCSAVG00000008018	-	100	48.087	ENSMGAG00000011481	-	51	52.672	Meleagris_gallopavo
ENSCSAVG00000008018	-	100	47.826	ENSMAUG00000000847	Frg1	51	53.788	Mesocricetus_auratus
ENSCSAVG00000008018	-	100	48.370	ENSMICG00000046816	FRG1	51	54.545	Microcebus_murinus
ENSCSAVG00000008018	-	75	52.174	ENSMMOG00000004008	frg1	56	54.198	Mola_mola
ENSCSAVG00000008018	-	100	46.995	ENSMALG00000018497	frg1	64	54.135	Monopterus_albus
ENSCSAVG00000008018	-	100	47.826	MGP_CAROLIEiJ_G0031006	Frg1	51	53.788	Mus_caroli
ENSCSAVG00000008018	-	100	47.826	ENSMUSG00000031590	Frg1	51	53.788	Mus_musculus
ENSCSAVG00000008018	-	100	47.283	MGP_PahariEiJ_G0021475	Frg1	51	53.030	Mus_pahari
ENSCSAVG00000008018	-	100	47.826	MGP_SPRETEiJ_G0032120	Frg1	51	53.788	Mus_spretus
ENSCSAVG00000008018	-	100	48.370	ENSMPUG00000017962	FRG1	51	54.545	Mustela_putorius_furo
ENSCSAVG00000008018	-	100	49.457	ENSMLUG00000023179	FRG1	51	54.545	Myotis_lucifugus
ENSCSAVG00000008018	-	100	48.370	ENSNGAG00000016411	Frg1	51	54.545	Nannospalax_galili
ENSCSAVG00000008018	-	100	44.086	ENSNBRG00000006806	frg1	63	53.383	Neolamprologus_brichardi
ENSCSAVG00000008018	-	69	50.000	ENSNLEG00000028874	-	56	50.000	Nomascus_leucogenys
ENSCSAVG00000008018	-	99	44.505	ENSNLEG00000035849	-	50	51.220	Nomascus_leucogenys
ENSCSAVG00000008018	-	69	50.781	ENSNLEG00000036059	-	53	50.781	Nomascus_leucogenys
ENSCSAVG00000008018	-	100	49.457	ENSNLEG00000000930	FRG1	51	54.545	Nomascus_leucogenys
ENSCSAVG00000008018	-	95	41.758	ENSNLEG00000032333	-	53	48.462	Nomascus_leucogenys
ENSCSAVG00000008018	-	100	45.652	ENSOPRG00000004722	-	51	53.030	Ochotona_princeps
ENSCSAVG00000008018	-	73	44.776	ENSODEG00000006953	-	60	44.776	Octodon_degus
ENSCSAVG00000008018	-	72	53.788	ENSODEG00000006458	-	51	53.788	Octodon_degus
ENSCSAVG00000008018	-	100	46.995	ENSONIG00000010162	frg1	51	53.435	Oreochromis_niloticus
ENSCSAVG00000008018	-	100	47.826	ENSOCUG00000009038	-	51	53.788	Oryctolagus_cuniculus
ENSCSAVG00000008018	-	100	48.087	ENSORLG00000008106	frg1	63	47.541	Oryzias_latipes
ENSCSAVG00000008018	-	100	47.541	ENSORLG00020014355	frg1	68	46.995	Oryzias_latipes_hni
ENSCSAVG00000008018	-	100	47.541	ENSORLG00015014159	frg1	68	46.995	Oryzias_latipes_hsok
ENSCSAVG00000008018	-	100	45.902	ENSOMEG00000002468	frg1	54	51.538	Oryzias_melastigma
ENSCSAVG00000008018	-	100	49.457	ENSOGAG00000005749	-	51	54.545	Otolemur_garnettii
ENSCSAVG00000008018	-	100	48.370	ENSOARG00000008592	FRG1	51	54.545	Ovis_aries
ENSCSAVG00000008018	-	100	48.370	ENSPPAG00000043170	-	61	54.545	Pan_paniscus
ENSCSAVG00000008018	-	100	48.913	ENSPPRG00000019777	-	51	53.788	Panthera_pardus
ENSCSAVG00000008018	-	100	48.370	ENSPPRG00000025003	-	51	54.545	Panthera_pardus
ENSCSAVG00000008018	-	100	48.913	ENSPTIG00000006566	-	51	53.788	Panthera_tigris_altaica
ENSCSAVG00000008018	-	100	47.826	ENSPTIG00000006588	-	51	53.788	Panthera_tigris_altaica
ENSCSAVG00000008018	-	100	48.370	ENSPTRG00000016671	-	57	54.615	Pan_troglodytes
ENSCSAVG00000008018	-	99	40.659	ENSPTRG00000052363	-	53	45.385	Pan_troglodytes
ENSCSAVG00000008018	-	100	43.386	ENSPTRG00000043123	-	56	49.618	Pan_troglodytes
ENSCSAVG00000008018	-	100	42.857	ENSPTRG00000044710	-	59	49.635	Pan_troglodytes
ENSCSAVG00000008018	-	99	40.217	ENSPTRG00000050204	-	55	46.212	Pan_troglodytes
ENSCSAVG00000008018	-	100	48.370	ENSPTRG00000050205	-	57	54.615	Pan_troglodytes
ENSCSAVG00000008018	-	100	46.196	ENSPANG00000031530	-	58	56.780	Papio_anubis
ENSCSAVG00000008018	-	100	48.087	ENSPKIG00000024189	frg1	68	48.087	Paramormyrops_kingsleyae
ENSCSAVG00000008018	-	72	56.489	ENSPSIG00000017971	-	50	56.489	Pelodiscus_sinensis
ENSCSAVG00000008018	-	100	44.262	ENSPMGG00000019273	frg1	54	52.672	Periophthalmus_magnuspinnatus
ENSCSAVG00000008018	-	100	47.826	ENSPEMG00000000650	Frg1	51	53.788	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008018	-	100	48.087	ENSPFOG00000006721	frg1	52	53.383	Poecilia_formosa
ENSCSAVG00000008018	-	54	54.545	ENSPLAG00000005321	frg1	63	54.545	Poecilia_latipinna
ENSCSAVG00000008018	-	100	48.634	ENSPMEG00000013816	frg1	51	54.198	Poecilia_mexicana
ENSCSAVG00000008018	-	100	48.087	ENSPREG00000000097	frg1	51	53.435	Poecilia_reticulata
ENSCSAVG00000008018	-	61	54.867	ENSPPYG00000029810	-	78	54.867	Pongo_abelii
ENSCSAVG00000008018	-	100	49.457	ENSPCAG00000014953	-	54	54.545	Procavia_capensis
ENSCSAVG00000008018	-	83	46.053	ENSPCOG00000022726	FRG1	56	53.000	Propithecus_coquereli
ENSCSAVG00000008018	-	100	36.957	ENSPVAG00000010551	FRG1	51	37.879	Pteropus_vampyrus
ENSCSAVG00000008018	-	100	46.448	ENSPNAG00000013259	frg1	54	56.489	Pygocentrus_nattereri
ENSCSAVG00000008018	-	100	47.826	ENSRNOG00000009846	Frg1	51	53.788	Rattus_norvegicus
ENSCSAVG00000008018	-	100	48.370	ENSRBIG00000042219	-	54	55.039	Rhinopithecus_bieti
ENSCSAVG00000008018	-	70	52.713	ENSRROG00000032084	-	54	52.713	Rhinopithecus_roxellana
ENSCSAVG00000008018	-	100	49.198	ENSRROG00000015523	FRG1	54	55.556	Rhinopithecus_roxellana
ENSCSAVG00000008018	-	100	49.457	ENSSBOG00000034175	FRG1	51	54.545	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008018	-	100	49.457	ENSSHAG00000005886	-	51	55.303	Sarcophilus_harrisii
ENSCSAVG00000008018	-	100	48.087	ENSSFOG00015021361	frg1	52	54.962	Scleropages_formosus
ENSCSAVG00000008018	-	71	54.615	ENSSMAG00000001213	frg1	51	54.615	Scophthalmus_maximus
ENSCSAVG00000008018	-	72	56.489	ENSSDUG00000018886	frg1	51	56.489	Seriola_dumerili
ENSCSAVG00000008018	-	72	56.489	ENSSLDG00000024191	frg1	51	56.489	Seriola_lalandi_dorsalis
ENSCSAVG00000008018	-	72	55.303	ENSSARG00000002471	-	70	55.303	Sorex_araneus
ENSCSAVG00000008018	-	100	48.087	ENSSPUG00000017326	-	61	54.962	Sphenodon_punctatus
ENSCSAVG00000008018	-	73	52.632	ENSSPAG00000013294	frg1	53	52.632	Stegastes_partitus
ENSCSAVG00000008018	-	72	54.545	ENSSSCG00000006996	FRG1	51	54.545	Sus_scrofa
ENSCSAVG00000008018	-	100	48.087	ENSTGUG00000007028	-	51	53.435	Taeniopygia_guttata
ENSCSAVG00000008018	-	100	46.448	ENSTRUG00000016208	frg1	51	51.908	Takifugu_rubripes
ENSCSAVG00000008018	-	100	45.946	ENSTNIG00000007128	frg1	68	44.809	Tetraodon_nigroviridis
ENSCSAVG00000008018	-	69	38.583	ENSTBEG00000017605	-	64	38.281	Tupaia_belangeri
ENSCSAVG00000008018	-	100	47.826	ENSTBEG00000014491	-	51	53.788	Tupaia_belangeri
ENSCSAVG00000008018	-	100	48.913	ENSTTRG00000003429	FRG1	51	54.545	Tursiops_truncatus
ENSCSAVG00000008018	-	100	46.196	ENSUAMG00000012123	-	55	54.545	Ursus_americanus
ENSCSAVG00000008018	-	100	48.370	ENSUMAG00000021119	FRG1	51	54.545	Ursus_maritimus
ENSCSAVG00000008018	-	72	53.788	ENSVPAG00000011977	-	56	53.788	Vicugna_pacos
ENSCSAVG00000008018	-	100	50.000	ENSVPAG00000000616	FRG1	52	53.030	Vicugna_pacos
ENSCSAVG00000008018	-	100	49.727	ENSXETG00000012470	frg1	68	49.180	Xenopus_tropicalis
ENSCSAVG00000008018	-	100	45.902	ENSXCOG00000005312	frg1	53	54.887	Xiphophorus_couchianus
ENSCSAVG00000008018	-	100	49.180	ENSXMAG00000007751	frg1	53	54.887	Xiphophorus_maculatus