EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008036 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 944 bases
Position: chrreftig_117:943187-944130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013702	RNase_P_pop3	PF08228.11	1.4e-05	1	1
ENSCSAVP00000013702	Ribosomal_L7Ae	PF01248.26	9.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013860	-	944	-	ENSCSAVP00000013702	152 (aa)	-	H2Z7Z0

Gene Model

Click here to download ENSCSAVG00000008036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008036	-	70	38.679	ENSCSAVG00000010324	-	83	38.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008036	-	86	63.077	ENSG00000145912	NHP2	85	63.077	Homo_sapiens
ENSCSAVG00000008036	-	98	56.667	ENSAPOG00000004742	nhp2	98	56.667	Acanthochromis_polyacanthus
ENSCSAVG00000008036	-	86	63.846	ENSAMEG00000006471	NHP2	85	63.846	Ailuropoda_melanoleuca
ENSCSAVG00000008036	-	85	58.915	ENSACIG00000007968	nhp2	98	52.903	Amphilophus_citrinellus
ENSCSAVG00000008036	-	86	60.769	ENSAOCG00000016311	nhp2	98	56.667	Amphiprion_ocellaris
ENSCSAVG00000008036	-	86	60.769	ENSAPEG00000008765	nhp2	98	56.667	Amphiprion_percula
ENSCSAVG00000008036	-	87	58.333	ENSATEG00000009651	nhp2	85	58.333	Anabas_testudineus
ENSCSAVG00000008036	-	85	61.240	ENSACAG00000006692	NHP2	85	61.538	Anolis_carolinensis
ENSCSAVG00000008036	-	84	53.125	ENSANAG00000031552	-	98	53.125	Aotus_nancymaae
ENSCSAVG00000008036	-	87	62.121	ENSANAG00000023290	NHP2	86	62.121	Aotus_nancymaae
ENSCSAVG00000008036	-	86	60.769	ENSACLG00000001082	nhp2	90	57.971	Astatotilapia_calliptera
ENSCSAVG00000008036	-	98	54.362	ENSAMXG00000005845	nhp2	98	54.362	Astyanax_mexicanus
ENSCSAVG00000008036	-	86	63.846	ENSBTAG00000006374	NHP2	85	63.846	Bos_taurus
ENSCSAVG00000008036	-	90	42.029	WBGene00012964	Y48A6B.3	85	42.029	Caenorhabditis_elegans
ENSCSAVG00000008036	-	87	62.121	ENSCJAG00000038564	-	86	62.121	Callithrix_jacchus
ENSCSAVG00000008036	-	86	62.308	ENSCJAG00000023093	-	85	62.308	Callithrix_jacchus
ENSCSAVG00000008036	-	86	63.846	ENSCAFG00000000240	NHP2	85	63.846	Canis_familiaris
ENSCSAVG00000008036	-	86	63.846	ENSCHIG00000015159	NHP2	85	63.846	Capra_hircus
ENSCSAVG00000008036	-	87	46.970	ENSTSYG00000008150	NHP2	84	46.970	Carlito_syrichta
ENSCSAVG00000008036	-	86	63.846	ENSCPOG00000033753	NHP2	85	63.846	Cavia_porcellus
ENSCSAVG00000008036	-	87	62.121	ENSCCAG00000034815	NHP2	86	62.121	Cebus_capucinus
ENSCSAVG00000008036	-	86	55.385	ENSCCAG00000034664	-	89	55.385	Cebus_capucinus
ENSCSAVG00000008036	-	88	55.970	ENSCCAG00000027964	-	91	55.970	Cebus_capucinus
ENSCSAVG00000008036	-	86	63.077	ENSCATG00000043608	NHP2	85	63.077	Cercocebus_atys
ENSCSAVG00000008036	-	88	61.654	ENSCLAG00000016005	NHP2	87	61.654	Chinchilla_lanigera
ENSCSAVG00000008036	-	86	63.077	ENSCSAG00000008690	NHP2	85	63.077	Chlorocebus_sabaeus
ENSCSAVG00000008036	-	86	63.846	ENSCHOG00000013038	NHP2	85	63.846	Choloepus_hoffmanni
ENSCSAVG00000008036	-	85	62.791	ENSCPBG00000022106	NHP2	87	63.077	Chrysemys_picta_bellii
ENSCSAVG00000008036	-	77	65.812	ENSCANG00000038441	-	79	67.816	Colobus_angolensis_palliatus
ENSCSAVG00000008036	-	86	63.077	ENSCANG00000031562	NHP2	85	63.077	Colobus_angolensis_palliatus
ENSCSAVG00000008036	-	88	63.910	ENSCGRG00001005326	Nhp2	87	63.910	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008036	-	88	63.910	ENSCGRG00000013680	Nhp2	87	63.910	Cricetulus_griseus_crigri
ENSCSAVG00000008036	-	98	58.553	ENSCSEG00000006761	nhp2	98	58.553	Cynoglossus_semilaevis
ENSCSAVG00000008036	-	98	57.718	ENSDARG00000069422	nhp2	98	57.718	Danio_rerio
ENSCSAVG00000008036	-	86	64.615	ENSDNOG00000017150	NHP2	80	64.615	Dasypus_novemcinctus
ENSCSAVG00000008036	-	87	63.636	ENSDORG00000003312	Nhp2	86	63.636	Dipodomys_ordii
ENSCSAVG00000008036	-	86	48.092	FBgn0029148	NHP2	82	48.092	Drosophila_melanogaster
ENSCSAVG00000008036	-	87	62.879	ENSETEG00000006774	NHP2	86	62.879	Echinops_telfairi
ENSCSAVG00000008036	-	86	63.846	ENSEASG00005012569	NHP2	85	63.846	Equus_asinus_asinus
ENSCSAVG00000008036	-	82	64.800	ENSECAG00000022963	NHP2	71	64.800	Equus_caballus
ENSCSAVG00000008036	-	64	60.825	ENSELUG00000021981	nhp2	83	60.825	Esox_lucius
ENSCSAVG00000008036	-	86	63.846	ENSFCAG00000015541	NHP2	85	63.846	Felis_catus
ENSCSAVG00000008036	-	84	61.719	ENSFALG00000008774	NHP2	81	61.538	Ficedula_albicollis
ENSCSAVG00000008036	-	98	55.333	ENSFDAG00000008131	NHP2	98	55.333	Fukomys_damarensis
ENSCSAVG00000008036	-	87	59.091	ENSFHEG00000000431	nhp2	85	59.091	Fundulus_heteroclitus
ENSCSAVG00000008036	-	87	60.606	ENSGMOG00000000278	nhp2	87	60.606	Gadus_morhua
ENSCSAVG00000008036	-	80	64.463	ENSGALG00000033666	NHP2	73	64.228	Gallus_gallus
ENSCSAVG00000008036	-	86	58.462	ENSGAFG00000009838	nhp2	85	58.333	Gambusia_affinis
ENSCSAVG00000008036	-	87	62.121	ENSGACG00000020889	nhp2	98	58.667	Gasterosteus_aculeatus
ENSCSAVG00000008036	-	65	68.000	ENSGAGG00000006901	NHP2	80	68.000	Gopherus_agassizii
ENSCSAVG00000008036	-	85	55.814	ENSGGOG00000027198	-	88	55.814	Gorilla_gorilla
ENSCSAVG00000008036	-	85	55.814	ENSGGOG00000040409	-	88	55.814	Gorilla_gorilla
ENSCSAVG00000008036	-	85	61.240	ENSHBUG00000010207	nhp2	90	58.696	Haplochromis_burtoni
ENSCSAVG00000008036	-	88	63.158	ENSHGLG00000013630	NHP2	87	63.158	Heterocephalus_glaber_female
ENSCSAVG00000008036	-	88	56.391	ENSHGLG00000014450	-	92	56.391	Heterocephalus_glaber_female
ENSCSAVG00000008036	-	88	56.391	ENSHGLG00100003440	-	92	56.391	Heterocephalus_glaber_male
ENSCSAVG00000008036	-	88	63.158	ENSHGLG00100007298	NHP2	87	63.158	Heterocephalus_glaber_male
ENSCSAVG00000008036	-	88	56.391	ENSHGLG00100005282	-	92	56.391	Heterocephalus_glaber_male
ENSCSAVG00000008036	-	97	55.263	ENSHCOG00000019552	nhp2	96	55.263	Hippocampus_comes
ENSCSAVG00000008036	-	98	57.718	ENSIPUG00000024197	NHP2	98	57.718	Ictalurus_punctatus
ENSCSAVG00000008036	-	86	63.846	ENSSTOG00000003235	NHP2	85	63.846	Ictidomys_tridecemlineatus
ENSCSAVG00000008036	-	85	61.240	ENSJJAG00000016469	Nhp2	98	57.047	Jaculus_jaculus
ENSCSAVG00000008036	-	98	55.921	ENSLBEG00000002128	nhp2	98	55.921	Labrus_bergylta
ENSCSAVG00000008036	-	98	59.603	ENSLACG00000017167	NHP2	97	59.603	Latimeria_chalumnae
ENSCSAVG00000008036	-	86	62.595	ENSLOCG00000009630	nhp2	99	58.667	Lepisosteus_oculatus
ENSCSAVG00000008036	-	86	63.077	ENSLAFG00000012828	NHP2	85	63.077	Loxodonta_africana
ENSCSAVG00000008036	-	86	63.077	ENSMFAG00000032376	NHP2	85	63.077	Macaca_fascicularis
ENSCSAVG00000008036	-	85	49.612	ENSMMUG00000046673	-	87	49.612	Macaca_mulatta
ENSCSAVG00000008036	-	86	63.077	ENSMNEG00000038787	NHP2	85	63.077	Macaca_nemestrina
ENSCSAVG00000008036	-	86	63.077	ENSMLEG00000028639	NHP2	85	63.077	Mandrillus_leucophaeus
ENSCSAVG00000008036	-	98	55.921	ENSMAMG00000022425	nhp2	98	55.921	Mastacembelus_armatus
ENSCSAVG00000008036	-	86	60.769	ENSMZEG00005027834	nhp2	90	57.971	Maylandia_zebra
ENSCSAVG00000008036	-	64	61.856	ENSMGAG00000003917	NHP2	97	61.856	Meleagris_gallopavo
ENSCSAVG00000008036	-	86	63.846	ENSMICG00000005379	NHP2	85	63.846	Microcebus_murinus
ENSCSAVG00000008036	-	88	64.662	ENSMOCG00000022171	Nhp2	87	64.662	Microtus_ochrogaster
ENSCSAVG00000008036	-	88	58.647	ENSMMOG00000016811	nhp2	88	57.353	Mola_mola
ENSCSAVG00000008036	-	98	58.940	ENSMODG00000004231	NHP2	98	58.940	Monodelphis_domestica
ENSCSAVG00000008036	-	98	55.921	ENSMALG00000009613	nhp2	98	55.921	Monopterus_albus
ENSCSAVG00000008036	-	88	64.662	MGP_CAROLIEiJ_G0016312	Nhp2	87	64.662	Mus_caroli
ENSCSAVG00000008036	-	88	64.662	ENSMUSG00000001056	Nhp2	87	64.662	Mus_musculus
ENSCSAVG00000008036	-	88	64.662	MGP_PahariEiJ_G0017447	Nhp2	87	64.662	Mus_pahari
ENSCSAVG00000008036	-	88	64.662	MGP_SPRETEiJ_G0017156	Nhp2	87	64.662	Mus_spretus
ENSCSAVG00000008036	-	86	63.359	ENSMPUG00000000747	NHP2	85	63.359	Mustela_putorius_furo
ENSCSAVG00000008036	-	86	63.077	ENSMLUG00000003377	NHP2	85	63.077	Myotis_lucifugus
ENSCSAVG00000008036	-	98	59.060	ENSNGAG00000021818	Nhp2	98	59.060	Nannospalax_galili
ENSCSAVG00000008036	-	85	62.016	ENSNBRG00000018016	nhp2	90	59.420	Neolamprologus_brichardi
ENSCSAVG00000008036	-	86	56.618	ENSNLEG00000015765	NHP2	89	56.618	Nomascus_leucogenys
ENSCSAVG00000008036	-	98	59.603	ENSMEUG00000003839	NHP2	98	59.603	Notamacropus_eugenii
ENSCSAVG00000008036	-	99	46.753	ENSOPRG00000007907	NHP2	99	46.753	Ochotona_princeps
ENSCSAVG00000008036	-	87	62.879	ENSODEG00000006948	NHP2	86	62.879	Octodon_degus
ENSCSAVG00000008036	-	85	62.016	ENSONIG00000017865	nhp2	90	59.420	Oreochromis_niloticus
ENSCSAVG00000008036	-	89	62.222	ENSOCUG00000016057	-	88	62.222	Oryctolagus_cuniculus
ENSCSAVG00000008036	-	89	61.481	ENSOCUG00000016091	-	88	61.481	Oryctolagus_cuniculus
ENSCSAVG00000008036	-	86	61.538	ENSORLG00000029195	nhp2	86	61.538	Oryzias_latipes
ENSCSAVG00000008036	-	86	61.538	ENSORLG00020003277	nhp2	86	61.538	Oryzias_latipes_hni
ENSCSAVG00000008036	-	86	61.538	ENSORLG00015007851	nhp2	87	63.559	Oryzias_latipes_hsok
ENSCSAVG00000008036	-	86	63.077	ENSOMEG00000017381	nhp2	76	63.077	Oryzias_melastigma
ENSCSAVG00000008036	-	86	63.158	ENSOGAG00000016108	NHP2	86	63.158	Otolemur_garnettii
ENSCSAVG00000008036	-	86	57.692	ENSOARG00000006274	NHP2	84	57.692	Ovis_aries
ENSCSAVG00000008036	-	86	63.077	ENSPPAG00000028668	NHP2	85	63.077	Pan_paniscus
ENSCSAVG00000008036	-	86	55.385	ENSPPAG00000038834	-	89	55.385	Pan_paniscus
ENSCSAVG00000008036	-	86	63.846	ENSPPRG00000022505	NHP2	85	63.846	Panthera_pardus
ENSCSAVG00000008036	-	60	62.637	ENSPTIG00000021731	NHP2	79	62.626	Panthera_tigris_altaica
ENSCSAVG00000008036	-	86	63.077	ENSPTRG00000048185	NHP2	85	63.077	Pan_troglodytes
ENSCSAVG00000008036	-	85	55.039	ENSPTRG00000050430	-	89	55.039	Pan_troglodytes
ENSCSAVG00000008036	-	85	55.039	ENSPTRG00000049011	-	89	55.039	Pan_troglodytes
ENSCSAVG00000008036	-	86	63.077	ENSPANG00000019121	NHP2	85	63.077	Papio_anubis
ENSCSAVG00000008036	-	87	59.091	ENSPKIG00000006410	nhp2	98	55.034	Paramormyrops_kingsleyae
ENSCSAVG00000008036	-	86	61.069	ENSPMGG00000002916	nhp2	80	61.069	Periophthalmus_magnuspinnatus
ENSCSAVG00000008036	-	88	64.662	ENSPEMG00000023567	Nhp2	87	64.662	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008036	-	86	66.923	ENSPMAG00000009888	nhp2	84	66.923	Petromyzon_marinus
ENSCSAVG00000008036	-	71	62.037	ENSPCIG00000019848	-	90	62.037	Phascolarctos_cinereus
ENSCSAVG00000008036	-	98	59.603	ENSPCIG00000002727	-	98	59.603	Phascolarctos_cinereus
ENSCSAVG00000008036	-	87	58.333	ENSPFOG00000002315	nhp2	85	58.333	Poecilia_formosa
ENSCSAVG00000008036	-	87	57.576	ENSPLAG00000019287	nhp2	85	57.576	Poecilia_latipinna
ENSCSAVG00000008036	-	87	58.333	ENSPMEG00000024346	nhp2	85	58.333	Poecilia_mexicana
ENSCSAVG00000008036	-	71	53.704	ENSPREG00000005005	nhp2	92	53.704	Poecilia_reticulata
ENSCSAVG00000008036	-	86	62.308	ENSPPYG00000016105	NHP2	85	62.308	Pongo_abelii
ENSCSAVG00000008036	-	86	63.846	ENSPCOG00000020708	NHP2	85	63.846	Propithecus_coquereli
ENSCSAVG00000008036	-	86	63.077	ENSPVAG00000001647	NHP2	85	63.077	Pteropus_vampyrus
ENSCSAVG00000008036	-	85	61.240	ENSPNYG00000022418	nhp2	90	58.696	Pundamilia_nyererei
ENSCSAVG00000008036	-	98	54.362	ENSPNAG00000013779	nhp2	98	54.362	Pygocentrus_nattereri
ENSCSAVG00000008036	-	70	62.264	ENSRNOG00000004247	Nhp2	88	62.264	Rattus_norvegicus
ENSCSAVG00000008036	-	88	63.910	ENSRNOG00000049622	LOC103690013	87	63.910	Rattus_norvegicus
ENSCSAVG00000008036	-	86	63.077	ENSRBIG00000018610	NHP2	85	63.077	Rhinopithecus_bieti
ENSCSAVG00000008036	-	86	63.077	ENSRROG00000043373	NHP2	85	63.077	Rhinopithecus_roxellana
ENSCSAVG00000008036	-	86	53.846	ENSRROG00000044295	-	89	53.846	Rhinopithecus_roxellana
ENSCSAVG00000008036	-	84	49.275	YDL208W	-	88	49.275	Saccharomyces_cerevisiae
ENSCSAVG00000008036	-	87	62.121	ENSSBOG00000027889	NHP2	86	62.121	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008036	-	98	60.265	ENSSHAG00000015581	NHP2	98	60.265	Sarcophilus_harrisii
ENSCSAVG00000008036	-	98	55.705	ENSSFOG00015017061	nhp2	98	55.705	Scleropages_formosus
ENSCSAVG00000008036	-	87	59.848	ENSSMAG00000011251	nhp2	87	59.848	Scophthalmus_maximus
ENSCSAVG00000008036	-	98	56.000	ENSSDUG00000023355	nhp2	98	56.000	Seriola_dumerili
ENSCSAVG00000008036	-	98	55.705	ENSSPUG00000005173	NHP2	98	55.705	Sphenodon_punctatus
ENSCSAVG00000008036	-	98	56.667	ENSSPAG00000011696	nhp2	98	56.667	Stegastes_partitus
ENSCSAVG00000008036	-	86	63.846	ENSSSCG00000039635	-	73	63.846	Sus_scrofa
ENSCSAVG00000008036	-	68	58.654	ENSSSCG00000009710	-	73	58.654	Sus_scrofa
ENSCSAVG00000008036	-	65	62.626	ENSTGUG00000000368	NHP2	84	62.626	Taeniopygia_guttata
ENSCSAVG00000008036	-	87	61.364	ENSTRUG00000008183	nhp2	98	55.769	Takifugu_rubripes
ENSCSAVG00000008036	-	87	52.555	ENSTNIG00000004219	nhp2	93	48.366	Tetraodon_nigroviridis
ENSCSAVG00000008036	-	86	63.846	ENSUAMG00000025154	NHP2	85	63.846	Ursus_americanus
ENSCSAVG00000008036	-	86	63.846	ENSUMAG00000023916	NHP2	84	63.846	Ursus_maritimus
ENSCSAVG00000008036	-	60	64.835	ENSVPAG00000010059	NHP2	82	64.835	Vicugna_pacos
ENSCSAVG00000008036	-	86	52.866	ENSVVUG00000001030	NHP2	87	52.866	Vulpes_vulpes
ENSCSAVG00000008036	-	100	63.158	ENSXETG00000006731	nhp2	100	63.158	Xenopus_tropicalis
ENSCSAVG00000008036	-	86	58.462	ENSXMAG00000007031	nhp2	85	58.333	Xiphophorus_maculatus