EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008038 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4347 bases
Position: chrreftig_117:944190-948536
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013710	DcpS_C	PF11969.8	4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013868	-	1283	-	ENSCSAVP00000013710	369 (aa)	-	H2Z7Z8

Gene Model

Click here to download ENSCSAVG00000008038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008038's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008038	-	97	40.390	ENSG00000137074	APTX	91	51.445	Homo_sapiens
ENSCSAVG00000008038	-	97	40.223	ENSAPOG00000008785	aptx	98	39.106	Acanthochromis_polyacanthus
ENSCSAVG00000008038	-	97	40.166	ENSAMEG00000007648	APTX	94	39.833	Ailuropoda_melanoleuca
ENSCSAVG00000008038	-	97	35.635	ENSACIG00000002035	aptx	97	35.635	Amphilophus_citrinellus
ENSCSAVG00000008038	-	97	40.782	ENSAOCG00000000634	aptx	98	39.944	Amphiprion_ocellaris
ENSCSAVG00000008038	-	97	40.782	ENSAPEG00000017253	aptx	98	39.944	Amphiprion_percula
ENSCSAVG00000008038	-	97	39.665	ENSATEG00000017383	aptx	98	39.665	Anabas_testudineus
ENSCSAVG00000008038	-	89	39.104	ENSAPLG00000015645	APTX	99	39.222	Anas_platyrhynchos
ENSCSAVG00000008038	-	97	40.111	ENSACAG00000003581	APTX	93	40.390	Anolis_carolinensis
ENSCSAVG00000008038	-	97	40.443	ENSANAG00000030160	APTX	95	39.942	Aotus_nancymaae
ENSCSAVG00000008038	-	97	40.608	ENSACLG00000018887	aptx	98	40.608	Astatotilapia_calliptera
ENSCSAVG00000008038	-	97	40.055	ENSAMXG00000039899	aptx	98	39.722	Astyanax_mexicanus
ENSCSAVG00000008038	-	97	40.111	ENSBTAG00000013947	APTX	96	40.496	Bos_taurus
ENSCSAVG00000008038	-	97	39.835	ENSCJAG00000007940	APTX	97	39.560	Callithrix_jacchus
ENSCSAVG00000008038	-	97	39.833	ENSCAFG00000001812	APTX	98	39.833	Canis_familiaris
ENSCSAVG00000008038	-	97	39.833	ENSCAFG00020015598	APTX	98	39.833	Canis_lupus_dingo
ENSCSAVG00000008038	-	97	39.833	ENSCHIG00000012896	APTX	98	39.554	Capra_hircus
ENSCSAVG00000008038	-	97	41.389	ENSTSYG00000003041	APTX	97	41.061	Carlito_syrichta
ENSCSAVG00000008038	-	53	52.229	ENSCAPG00000013470	APTX	97	52.229	Cavia_aperea
ENSCSAVG00000008038	-	97	42.618	ENSCPOG00000005975	APTX	97	52.601	Cavia_porcellus
ENSCSAVG00000008038	-	97	40.111	ENSCCAG00000036783	APTX	97	40.111	Cebus_capucinus
ENSCSAVG00000008038	-	97	40.166	ENSCATG00000042639	APTX	94	40.317	Cercocebus_atys
ENSCSAVG00000008038	-	97	40.934	ENSCLAG00000012185	APTX	97	50.867	Chinchilla_lanigera
ENSCSAVG00000008038	-	97	40.669	ENSCSAG00000009885	APTX	94	40.111	Chlorocebus_sabaeus
ENSCSAVG00000008038	-	97	40.274	ENSCPBG00000023973	APTX	96	40.274	Chrysemys_picta_bellii
ENSCSAVG00000008038	-	98	63.488	ENSCING00000008741	-	96	62.670	Ciona_intestinalis
ENSCSAVG00000008038	-	97	39.833	ENSCANG00000037253	APTX	98	39.833	Colobus_angolensis_palliatus
ENSCSAVG00000008038	-	97	40.947	ENSCGRG00001000705	Aptx	95	50.867	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008038	-	97	40.947	ENSCGRG00000014159	Aptx	95	50.867	Cricetulus_griseus_crigri
ENSCSAVG00000008038	-	97	40.771	ENSCSEG00000009549	aptx	97	39.944	Cynoglossus_semilaevis
ENSCSAVG00000008038	-	97	40.503	ENSCVAG00000011942	aptx	97	41.061	Cyprinodon_variegatus
ENSCSAVG00000008038	-	97	39.665	ENSDARG00000027143	aptx	98	40.223	Danio_rerio
ENSCSAVG00000008038	-	97	41.226	ENSDNOG00000018498	APTX	94	40.947	Dasypus_novemcinctus
ENSCSAVG00000008038	-	98	38.950	ENSDORG00000002139	Aptx	97	50.867	Dipodomys_ordii
ENSCSAVG00000008038	-	81	38.870	ENSETEG00000012459	APTX	77	39.333	Echinops_telfairi
ENSCSAVG00000008038	-	96	39.496	ENSEBUG00000013914	aptx	94	39.496	Eptatretus_burgeri
ENSCSAVG00000008038	-	97	40.669	ENSEASG00005004566	APTX	98	39.833	Equus_asinus_asinus
ENSCSAVG00000008038	-	97	40.669	ENSECAG00000012674	APTX	90	39.833	Equus_caballus
ENSCSAVG00000008038	-	84	38.907	ENSEEUG00000010693	APTX	94	38.217	Erinaceus_europaeus
ENSCSAVG00000008038	-	97	40.111	ENSFCAG00000008728	APTX	98	40.111	Felis_catus
ENSCSAVG00000008038	-	97	40.111	ENSFALG00000001230	APTX	98	39.612	Ficedula_albicollis
ENSCSAVG00000008038	-	97	40.822	ENSFDAG00000013752	APTX	97	52.601	Fukomys_damarensis
ENSCSAVG00000008038	-	82	39.604	ENSFHEG00000021328	aptx	72	38.614	Fundulus_heteroclitus
ENSCSAVG00000008038	-	98	39.011	ENSGMOG00000012505	aptx	99	39.011	Gadus_morhua
ENSCSAVG00000008038	-	97	41.598	ENSGALG00000001954	APTX	98	41.644	Gallus_gallus
ENSCSAVG00000008038	-	97	41.899	ENSGAFG00000005086	aptx	98	40.669	Gambusia_affinis
ENSCSAVG00000008038	-	97	39.385	ENSGACG00000017887	aptx	97	39.385	Gasterosteus_aculeatus
ENSCSAVG00000008038	-	97	39.726	ENSGAGG00000013230	APTX	98	40.548	Gopherus_agassizii
ENSCSAVG00000008038	-	84	41.801	ENSGGOG00000014232	APTX	93	38.264	Gorilla_gorilla
ENSCSAVG00000008038	-	97	40.608	ENSHBUG00000021058	aptx	98	40.608	Haplochromis_burtoni
ENSCSAVG00000008038	-	97	40.111	ENSHGLG00000015093	APTX	97	52.023	Heterocephalus_glaber_female
ENSCSAVG00000008038	-	97	40.111	ENSHGLG00100013482	APTX	97	52.023	Heterocephalus_glaber_male
ENSCSAVG00000008038	-	97	40.000	ENSHCOG00000018216	aptx	94	40.000	Hippocampus_comes
ENSCSAVG00000008038	-	97	38.781	ENSIPUG00000017548	aptx	98	38.547	Ictalurus_punctatus
ENSCSAVG00000008038	-	97	39.276	ENSSTOG00000005185	APTX	97	51.445	Ictidomys_tridecemlineatus
ENSCSAVG00000008038	-	97	39.833	ENSJJAG00000015653	Aptx	98	39.227	Jaculus_jaculus
ENSCSAVG00000008038	-	97	41.620	ENSKMAG00000000117	aptx	98	39.722	Kryptolebias_marmoratus
ENSCSAVG00000008038	-	97	39.503	ENSLBEG00000015353	aptx	98	39.503	Labrus_bergylta
ENSCSAVG00000008038	-	97	36.464	ENSLBEG00000021489	APTX	98	36.464	Labrus_bergylta
ENSCSAVG00000008038	-	97	39.216	ENSLACG00000003376	APTX	98	39.496	Latimeria_chalumnae
ENSCSAVG00000008038	-	97	38.017	ENSLOCG00000011556	aptx	94	38.017	Lepisosteus_oculatus
ENSCSAVG00000008038	-	97	40.947	ENSLAFG00000005665	APTX	97	40.390	Loxodonta_africana
ENSCSAVG00000008038	-	97	40.166	ENSMFAG00000043141	APTX	95	40.166	Macaca_fascicularis
ENSCSAVG00000008038	-	97	40.166	ENSMMUG00000007724	APTX	94	40.317	Macaca_mulatta
ENSCSAVG00000008038	-	97	40.166	ENSMNEG00000042341	APTX	98	40.166	Macaca_nemestrina
ENSCSAVG00000008038	-	97	40.166	ENSMLEG00000035137	APTX	98	40.166	Mandrillus_leucophaeus
ENSCSAVG00000008038	-	97	38.827	ENSMAMG00000018377	aptx	98	38.827	Mastacembelus_armatus
ENSCSAVG00000008038	-	96	40.443	ENSMZEG00005022621	aptx	98	40.443	Maylandia_zebra
ENSCSAVG00000008038	-	97	38.719	ENSMAUG00000006039	Aptx	95	50.289	Mesocricetus_auratus
ENSCSAVG00000008038	-	97	40.947	ENSMICG00000006603	APTX	95	40.947	Microcebus_murinus
ENSCSAVG00000008038	-	97	39.889	ENSMOCG00000000869	Aptx	95	51.786	Microtus_ochrogaster
ENSCSAVG00000008038	-	97	41.061	ENSMMOG00000007028	aptx	98	40.782	Mola_mola
ENSCSAVG00000008038	-	97	41.504	ENSMODG00000003365	APTX	98	41.504	Monodelphis_domestica
ENSCSAVG00000008038	-	97	36.011	ENSMALG00000003828	aptx	97	34.072	Monopterus_albus
ENSCSAVG00000008038	-	62	50.867	MGP_CAROLIEiJ_G0025897	-	95	50.867	Mus_caroli
ENSCSAVG00000008038	-	97	40.390	ENSMUSG00000028411	Aptx	95	50.867	Mus_musculus
ENSCSAVG00000008038	-	97	40.997	MGP_PahariEiJ_G0024020	Aptx	98	40.669	Mus_pahari
ENSCSAVG00000008038	-	97	40.669	MGP_SPRETEiJ_G0026846	Aptx	95	40.385	Mus_spretus
ENSCSAVG00000008038	-	97	39.286	ENSMPUG00000004290	APTX	98	38.719	Mustela_putorius_furo
ENSCSAVG00000008038	-	97	41.226	ENSMLUG00000016081	APTX	93	41.226	Myotis_lucifugus
ENSCSAVG00000008038	-	97	40.390	ENSNGAG00000016314	Aptx	95	51.786	Nannospalax_galili
ENSCSAVG00000008038	-	97	40.223	ENSNBRG00000014199	aptx	98	40.223	Neolamprologus_brichardi
ENSCSAVG00000008038	-	97	40.669	ENSNLEG00000032184	APTX	98	40.669	Nomascus_leucogenys
ENSCSAVG00000008038	-	98	38.904	ENSMEUG00000004153	APTX	99	38.187	Notamacropus_eugenii
ENSCSAVG00000008038	-	84	39.744	ENSOPRG00000012403	APTX	94	39.564	Ochotona_princeps
ENSCSAVG00000008038	-	97	39.833	ENSODEG00000015832	-	97	51.445	Octodon_degus
ENSCSAVG00000008038	-	62	51.445	ENSODEG00000000097	-	82	51.445	Octodon_degus
ENSCSAVG00000008038	-	97	40.782	ENSONIG00000014541	aptx	81	40.782	Oreochromis_niloticus
ENSCSAVG00000008038	-	84	41.401	ENSOANG00000009878	APTX	97	41.720	Ornithorhynchus_anatinus
ENSCSAVG00000008038	-	72	50.581	ENSOCUG00000025059	-	90	50.581	Oryctolagus_cuniculus
ENSCSAVG00000008038	-	97	39.944	ENSOCUG00000000738	-	97	40.000	Oryctolagus_cuniculus
ENSCSAVG00000008038	-	97	38.056	ENSORLG00000006237	aptx	98	37.709	Oryzias_latipes
ENSCSAVG00000008038	-	97	38.268	ENSORLG00020021478	aptx	98	37.709	Oryzias_latipes_hni
ENSCSAVG00000008038	-	97	37.883	ENSORLG00015021873	aptx	98	38.162	Oryzias_latipes_hsok
ENSCSAVG00000008038	-	86	39.812	ENSOMEG00000007875	aptx	80	38.871	Oryzias_melastigma
ENSCSAVG00000008038	-	97	41.226	ENSOGAG00000005388	APTX	94	41.226	Otolemur_garnettii
ENSCSAVG00000008038	-	97	39.554	ENSOARG00000009598	APTX	94	39.554	Ovis_aries
ENSCSAVG00000008038	-	97	40.390	ENSPPAG00000030295	APTX	94	39.557	Pan_paniscus
ENSCSAVG00000008038	-	97	40.111	ENSPPRG00000017524	APTX	98	40.111	Panthera_pardus
ENSCSAVG00000008038	-	97	40.111	ENSPTIG00000020000	APTX	98	40.111	Panthera_tigris_altaica
ENSCSAVG00000008038	-	97	40.390	ENSPTRG00000020850	APTX	98	39.503	Pan_troglodytes
ENSCSAVG00000008038	-	97	39.889	ENSPANG00000025301	APTX	94	40.000	Papio_anubis
ENSCSAVG00000008038	-	97	40.223	ENSPKIG00000013601	aptx	98	40.223	Paramormyrops_kingsleyae
ENSCSAVG00000008038	-	97	41.322	ENSPSIG00000010521	APTX	93	39.945	Pelodiscus_sinensis
ENSCSAVG00000008038	-	96	38.719	ENSPMGG00000018649	aptx	98	37.883	Periophthalmus_magnuspinnatus
ENSCSAVG00000008038	-	97	41.783	ENSPEMG00000007747	Aptx	95	52.023	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008038	-	96	34.349	ENSPMAG00000008417	aptx	95	34.072	Petromyzon_marinus
ENSCSAVG00000008038	-	97	40.556	ENSPCIG00000029852	APTX	98	40.385	Phascolarctos_cinereus
ENSCSAVG00000008038	-	97	42.179	ENSPFOG00000004992	aptx	98	40.669	Poecilia_formosa
ENSCSAVG00000008038	-	97	42.179	ENSPFOG00000005131	-	97	40.669	Poecilia_formosa
ENSCSAVG00000008038	-	97	42.179	ENSPLAG00000007960	APTX	98	40.669	Poecilia_latipinna
ENSCSAVG00000008038	-	97	42.179	ENSPLAG00000007906	aptx	98	40.669	Poecilia_latipinna
ENSCSAVG00000008038	-	97	42.179	ENSPMEG00000018504	aptx	98	40.669	Poecilia_mexicana
ENSCSAVG00000008038	-	97	42.179	ENSPMEG00000019789	APTX	98	40.669	Poecilia_mexicana
ENSCSAVG00000008038	-	97	38.827	ENSPREG00000004375	aptx	97	37.709	Poecilia_reticulata
ENSCSAVG00000008038	-	97	40.947	ENSPPYG00000019142	APTX	94	40.947	Pongo_abelii
ENSCSAVG00000008038	-	97	31.755	ENSPCAG00000010014	APTX	97	31.476	Procavia_capensis
ENSCSAVG00000008038	-	97	41.504	ENSPCOG00000016780	APTX	98	41.504	Propithecus_coquereli
ENSCSAVG00000008038	-	97	40.720	ENSPVAG00000011468	APTX	94	40.054	Pteropus_vampyrus
ENSCSAVG00000008038	-	97	40.608	ENSPNYG00000007675	aptx	98	40.608	Pundamilia_nyererei
ENSCSAVG00000008038	-	97	39.385	ENSPNAG00000015984	aptx	98	38.827	Pygocentrus_nattereri
ENSCSAVG00000008038	-	97	40.111	ENSRNOG00000006582	Aptx	98	40.111	Rattus_norvegicus
ENSCSAVG00000008038	-	97	40.111	ENSRBIG00000042913	APTX	98	40.111	Rhinopithecus_bieti
ENSCSAVG00000008038	-	97	40.443	ENSRROG00000035395	APTX	98	40.443	Rhinopithecus_roxellana
ENSCSAVG00000008038	-	97	39.833	ENSSBOG00000025215	APTX	98	39.833	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008038	-	97	40.833	ENSSHAG00000012205	APTX	94	40.443	Sarcophilus_harrisii
ENSCSAVG00000008038	-	97	38.162	ENSSFOG00015009267	aptx	98	37.883	Scleropages_formosus
ENSCSAVG00000008038	-	97	39.385	ENSSMAG00000008839	aptx	98	39.385	Scophthalmus_maximus
ENSCSAVG00000008038	-	97	39.227	ENSSDUG00000001989	aptx	98	39.227	Seriola_dumerili
ENSCSAVG00000008038	-	97	39.227	ENSSLDG00000004915	aptx	98	39.227	Seriola_lalandi_dorsalis
ENSCSAVG00000008038	-	94	41.547	ENSSPUG00000008994	APTX	82	41.429	Sphenodon_punctatus
ENSCSAVG00000008038	-	97	39.106	ENSSPAG00000020373	aptx	98	38.827	Stegastes_partitus
ENSCSAVG00000008038	-	97	41.226	ENSSSCG00000011001	APTX	98	41.226	Sus_scrofa
ENSCSAVG00000008038	-	97	42.033	ENSTGUG00000001441	APTX	98	41.758	Taeniopygia_guttata
ENSCSAVG00000008038	-	96	39.944	ENSTRUG00000009794	aptx	97	40.223	Takifugu_rubripes
ENSCSAVG00000008038	-	97	39.106	ENSTNIG00000010570	aptx	98	39.554	Tetraodon_nigroviridis
ENSCSAVG00000008038	-	97	37.883	ENSTBEG00000008504	APTX	94	37.047	Tupaia_belangeri
ENSCSAVG00000008038	-	92	37.758	ENSTTRG00000007384	APTX	95	37.752	Tursiops_truncatus
ENSCSAVG00000008038	-	97	40.166	ENSUAMG00000003700	APTX	98	38.356	Ursus_americanus
ENSCSAVG00000008038	-	97	40.166	ENSUMAG00000005837	APTX	98	40.548	Ursus_maritimus
ENSCSAVG00000008038	-	97	39.833	ENSVVUG00000021130	APTX	98	39.833	Vulpes_vulpes
ENSCSAVG00000008038	-	98	43.132	ENSXETG00000024143	aptx	99	43.562	Xenopus_tropicalis
ENSCSAVG00000008038	-	97	40.659	ENSXCOG00000005020	aptx	98	40.947	Xiphophorus_couchianus
ENSCSAVG00000008038	-	97	42.061	ENSXMAG00000022086	aptx	94	40.390	Xiphophorus_maculatus