EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008078 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 12814 bases
Position: chrreftig_48:525249-538062
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013774	Anticodon_1	PF08264.13	4.2e-25	1	1
ENSCSAVP00000013773	Anticodon_1	PF08264.13	1.3e-24	1	1
ENSCSAVP00000013775	Anticodon_1	PF08264.13	2.6e-22	1	1
ENSCSAVP00000013773	tRNA-synt_1	PF00133.22	1.1e-230	1	1
ENSCSAVP00000013775	tRNA-synt_1	PF00133.22	8.8e-220	1	2
ENSCSAVP00000013775	tRNA-synt_1	PF00133.22	8.8e-220	2	2
ENSCSAVP00000013774	tRNA-synt_1	PF00133.22	6e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013934	-	3276	-	ENSCSAVP00000013775	1092 (aa)	-	H2Z863
ENSCSAVT00000013932	-	3732	-	ENSCSAVP00000013773	1244 (aa)	-	H2Z861
ENSCSAVT00000013933	-	2130	-	ENSCSAVP00000013774	710 (aa)	-	H2Z862

Gene Model

Click here to download ENSCSAVG00000008078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008078	-	94	80.729	ENSG00000196305	IARS	99	80.729	Homo_sapiens
ENSCSAVG00000008078	-	94	82.292	ENSAPOG00000002559	iars	98	64.884	Acanthochromis_polyacanthus
ENSCSAVG00000008078	-	94	80.208	ENSAMEG00000013415	IARS	98	63.847	Ailuropoda_melanoleuca
ENSCSAVG00000008078	-	99	64.607	ENSACIG00000018381	iars	98	61.685	Amphilophus_citrinellus
ENSCSAVG00000008078	-	94	82.292	ENSAPEG00000005602	iars	98	64.570	Amphiprion_percula
ENSCSAVG00000008078	-	95	81.771	ENSATEG00000024989	iars	98	64.996	Anabas_testudineus
ENSCSAVG00000008078	-	94	82.292	ENSAPLG00000005750	IARS	98	65.657	Anas_platyrhynchos
ENSCSAVG00000008078	-	94	79.167	ENSACAG00000009212	IARS	98	64.968	Anolis_carolinensis
ENSCSAVG00000008078	-	94	80.208	ENSANAG00000035740	IARS	99	65.557	Aotus_nancymaae
ENSCSAVG00000008078	-	95	82.812	ENSACLG00000017656	iars	98	64.467	Astatotilapia_calliptera
ENSCSAVG00000008078	-	94	81.250	ENSAMXG00000036265	iars	98	63.644	Astyanax_mexicanus
ENSCSAVG00000008078	-	94	79.167	ENSBTAG00000000974	IARS	98	64.246	Bos_taurus
ENSCSAVG00000008078	-	94	68.750	WBGene00002152	iars-1	87	68.750	Caenorhabditis_elegans
ENSCSAVG00000008078	-	94	80.729	ENSCJAG00000020465	IARS	98	64.326	Callithrix_jacchus
ENSCSAVG00000008078	-	94	79.688	ENSCAFG00000002340	IARS	98	63.716	Canis_familiaris
ENSCSAVG00000008078	-	94	79.688	ENSCAFG00020009677	IARS	97	79.688	Canis_lupus_dingo
ENSCSAVG00000008078	-	94	78.646	ENSCHIG00000023719	IARS	98	64.326	Capra_hircus
ENSCSAVG00000008078	-	94	80.208	ENSTSYG00000001294	IARS	98	63.238	Carlito_syrichta
ENSCSAVG00000008078	-	87	83.432	ENSCAPG00000008012	IARS	71	83.432	Cavia_aperea
ENSCSAVG00000008078	-	94	80.729	ENSCPOG00000000819	IARS	98	63.904	Cavia_porcellus
ENSCSAVG00000008078	-	94	80.208	ENSCCAG00000022901	IARS	99	64.946	Cebus_capucinus
ENSCSAVG00000008078	-	94	80.729	ENSCATG00000044530	IARS	80	82.927	Cercocebus_atys
ENSCSAVG00000008078	-	88	97.872	ENSCLAG00000003319	IARS	95	97.872	Chinchilla_lanigera
ENSCSAVG00000008078	-	94	80.729	ENSCSAG00000007241	IARS	98	64.195	Chlorocebus_sabaeus
ENSCSAVG00000008078	-	85	73.684	ENSCHOG00000007264	IARS	85	73.684	Choloepus_hoffmanni
ENSCSAVG00000008078	-	89	79.688	ENSCPBG00000001174	IARS	99	74.242	Chrysemys_picta_bellii
ENSCSAVG00000008078	-	95	90.625	ENSCING00000002466	-	99	90.625	Ciona_intestinalis
ENSCSAVG00000008078	-	95	79.688	ENSCGRG00001023981	Iars	98	63.158	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008078	-	95	79.688	ENSCGRG00000007869	Iars	98	63.158	Cricetulus_griseus_crigri
ENSCSAVG00000008078	-	94	81.250	ENSCSEG00000010191	iars	95	64.813	Cynoglossus_semilaevis
ENSCSAVG00000008078	-	95	79.688	ENSDARG00000007955	iars	98	64.314	Danio_rerio
ENSCSAVG00000008078	-	94	80.208	ENSDNOG00000019773	IARS	98	62.420	Dasypus_novemcinctus
ENSCSAVG00000008078	-	94	79.688	ENSDORG00000004383	Iars	98	65.020	Dipodomys_ordii
ENSCSAVG00000008078	-	95	73.438	FBgn0027086	IleRS	81	73.438	Drosophila_melanogaster
ENSCSAVG00000008078	-	67	79.355	ENSETEG00000004138	-	56	79.355	Echinops_telfairi
ENSCSAVG00000008078	-	95	83.333	ENSEBUG00000016686	iars	86	83.333	Eptatretus_burgeri
ENSCSAVG00000008078	-	94	80.729	ENSEASG00005009580	IARS	93	80.729	Equus_asinus_asinus
ENSCSAVG00000008078	-	86	80.952	ENSEEUG00000012427	IARS	83	76.534	Erinaceus_europaeus
ENSCSAVG00000008078	-	95	80.208	ENSELUG00000015636	iars	98	60.956	Esox_lucius
ENSCSAVG00000008078	-	94	80.208	ENSFCAG00000000817	IARS	98	63.876	Felis_catus
ENSCSAVG00000008078	-	94	79.167	ENSFALG00000010261	IARS	93	65.555	Ficedula_albicollis
ENSCSAVG00000008078	-	94	81.250	ENSFDAG00000010686	IARS	98	63.397	Fukomys_damarensis
ENSCSAVG00000008078	-	96	82.812	ENSFHEG00000015399	iars	98	65.342	Fundulus_heteroclitus
ENSCSAVG00000008078	-	94	78.125	ENSGMOG00000003632	iars	98	63.405	Gadus_morhua
ENSCSAVG00000008078	-	94	82.292	ENSGALG00000004813	IARS	99	65.630	Gallus_gallus
ENSCSAVG00000008078	-	94	81.250	ENSGAFG00000012832	iars	98	64.092	Gambusia_affinis
ENSCSAVG00000008078	-	95	81.250	ENSGACG00000007055	iars	98	81.250	Gasterosteus_aculeatus
ENSCSAVG00000008078	-	94	80.208	ENSGAGG00000017539	IARS	99	64.912	Gopherus_agassizii
ENSCSAVG00000008078	-	94	80.729	ENSGGOG00000010212	IARS	98	63.557	Gorilla_gorilla
ENSCSAVG00000008078	-	95	82.812	ENSHBUG00000010503	iars	95	65.418	Haplochromis_burtoni
ENSCSAVG00000008078	-	94	80.208	ENSHGLG00000011793	IARS	98	63.158	Heterocephalus_glaber_female
ENSCSAVG00000008078	-	93	78.919	ENSHGLG00100019375	-	98	63.078	Heterocephalus_glaber_male
ENSCSAVG00000008078	-	82	77.778	ENSHGLG00100010624	-	89	80.645	Heterocephalus_glaber_male
ENSCSAVG00000008078	-	94	80.208	ENSHCOG00000017482	iars	98	64.331	Hippocampus_comes
ENSCSAVG00000008078	-	94	81.250	ENSIPUG00000012333	iars	99	64.130	Ictalurus_punctatus
ENSCSAVG00000008078	-	94	79.688	ENSSTOG00000015173	IARS	98	64.884	Ictidomys_tridecemlineatus
ENSCSAVG00000008078	-	95	80.729	ENSJJAG00000012564	Iars	98	64.274	Jaculus_jaculus
ENSCSAVG00000008078	-	95	83.333	ENSKMAG00000011154	iars	98	65.127	Kryptolebias_marmoratus
ENSCSAVG00000008078	-	94	80.729	ENSLBEG00000016283	iars	98	64.598	Labrus_bergylta
ENSCSAVG00000008078	-	94	82.812	ENSLACG00000018913	IARS	98	65.342	Latimeria_chalumnae
ENSCSAVG00000008078	-	94	79.688	ENSLOCG00000013871	iars	98	64.865	Lepisosteus_oculatus
ENSCSAVG00000008078	-	94	80.208	ENSLAFG00000012996	IARS	98	63.767	Loxodonta_africana
ENSCSAVG00000008078	-	94	80.729	ENSMFAG00000033748	IARS	80	82.927	Macaca_fascicularis
ENSCSAVG00000008078	-	99	63.944	ENSMMUG00000004628	IARS	98	62.762	Macaca_mulatta
ENSCSAVG00000008078	-	94	80.208	ENSMNEG00000018792	IARS	80	82.927	Macaca_nemestrina
ENSCSAVG00000008078	-	94	80.208	ENSMLEG00000035022	IARS	98	62.281	Mandrillus_leucophaeus
ENSCSAVG00000008078	-	94	81.250	ENSMAMG00000014297	iars	98	64.514	Mastacembelus_armatus
ENSCSAVG00000008078	-	95	82.812	ENSMZEG00005013533	iars	98	64.467	Maylandia_zebra
ENSCSAVG00000008078	-	94	82.292	ENSMGAG00000004555	IARS	97	65.473	Meleagris_gallopavo
ENSCSAVG00000008078	-	95	81.250	ENSMAUG00000018695	Iars	98	62.889	Mesocricetus_auratus
ENSCSAVG00000008078	-	94	79.688	ENSMICG00000014286	IARS	98	64.086	Microcebus_murinus
ENSCSAVG00000008078	-	95	81.250	ENSMOCG00000022610	Iars	98	64.006	Microtus_ochrogaster
ENSCSAVG00000008078	-	94	82.292	ENSMMOG00000010432	iars	99	62.954	Mola_mola
ENSCSAVG00000008078	-	94	78.646	ENSMODG00000020876	IARS	98	63.099	Monodelphis_domestica
ENSCSAVG00000008078	-	95	82.812	ENSMALG00000008778	iars	98	64.252	Monopterus_albus
ENSCSAVG00000008078	-	95	81.250	MGP_CAROLIEiJ_G0018510	Iars	100	78.261	Mus_caroli
ENSCSAVG00000008078	-	95	81.250	ENSMUSG00000037851	Iars	100	78.261	Mus_musculus
ENSCSAVG00000008078	-	95	81.771	MGP_PahariEiJ_G0019576	Iars	100	78.261	Mus_pahari
ENSCSAVG00000008078	-	95	81.250	MGP_SPRETEiJ_G0019390	Iars	100	78.261	Mus_spretus
ENSCSAVG00000008078	-	94	80.208	ENSMPUG00000004835	IARS	80	80.208	Mustela_putorius_furo
ENSCSAVG00000008078	-	94	79.688	ENSMLUG00000015180	IARS	98	62.839	Myotis_lucifugus
ENSCSAVG00000008078	-	95	82.812	ENSNBRG00000022044	iars	98	65.418	Neolamprologus_brichardi
ENSCSAVG00000008078	-	94	79.688	ENSNLEG00000016253	IARS	98	63.876	Nomascus_leucogenys
ENSCSAVG00000008078	-	89	78.646	ENSMEUG00000011662	IARS	93	61.106	Notamacropus_eugenii
ENSCSAVG00000008078	-	71	64.844	ENSOPRG00000009618	-	71	64.844	Ochotona_princeps
ENSCSAVG00000008078	-	89	53.109	ENSODEG00000008400	-	95	65.185	Octodon_degus
ENSCSAVG00000008078	-	94	81.771	ENSODEG00000004404	-	98	63.280	Octodon_degus
ENSCSAVG00000008078	-	94	82.812	ENSONIG00000014366	iars	98	65.498	Oreochromis_niloticus
ENSCSAVG00000008078	-	100	62.170	ENSOANG00000000112	-	99	60.834	Ornithorhynchus_anatinus
ENSCSAVG00000008078	-	94	80.729	ENSOCUG00000016888	IARS	98	64.035	Oryctolagus_cuniculus
ENSCSAVG00000008078	-	94	82.812	ENSORLG00000004747	iars	98	64.654	Oryzias_latipes
ENSCSAVG00000008078	-	94	82.292	ENSORLG00020018714	iars	78	82.292	Oryzias_latipes_hni
ENSCSAVG00000008078	-	94	82.292	ENSORLG00015014606	iars	98	64.575	Oryzias_latipes_hsok
ENSCSAVG00000008078	-	94	82.812	ENSOMEG00000020072	iars	98	64.813	Oryzias_melastigma
ENSCSAVG00000008078	-	94	80.208	ENSOGAG00000015426	IARS	98	64.274	Otolemur_garnettii
ENSCSAVG00000008078	-	94	79.167	ENSOARG00000008328	IARS	98	64.274	Ovis_aries
ENSCSAVG00000008078	-	94	80.729	ENSPPAG00000027754	IARS	98	63.636	Pan_paniscus
ENSCSAVG00000008078	-	94	80.208	ENSPPRG00000008953	IARS	98	64.115	Panthera_pardus
ENSCSAVG00000008078	-	99	63.739	ENSPTIG00000015464	IARS	98	62.500	Panthera_tigris_altaica
ENSCSAVG00000008078	-	94	80.729	ENSPTRG00000021108	IARS	88	80.729	Pan_troglodytes
ENSCSAVG00000008078	-	94	80.729	ENSPANG00000024723	IARS	80	82.927	Papio_anubis
ENSCSAVG00000008078	-	94	78.646	ENSPKIG00000025011	iars	98	62.969	Paramormyrops_kingsleyae
ENSCSAVG00000008078	-	94	80.208	ENSPSIG00000011011	IARS	98	64.462	Pelodiscus_sinensis
ENSCSAVG00000008078	-	97	64.672	ENSPMGG00000005379	iars	99	61.608	Periophthalmus_magnuspinnatus
ENSCSAVG00000008078	-	95	80.729	ENSPEMG00000012867	Iars	98	64.115	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008078	-	94	80.208	ENSPCIG00000023807	IARS	90	63.557	Phascolarctos_cinereus
ENSCSAVG00000008078	-	94	82.292	ENSPFOG00000011883	iars	98	64.360	Poecilia_formosa
ENSCSAVG00000008078	-	94	82.292	ENSPLAG00000012010	iars	98	64.439	Poecilia_latipinna
ENSCSAVG00000008078	-	94	82.292	ENSPMEG00000018215	iars	98	64.439	Poecilia_mexicana
ENSCSAVG00000008078	-	94	82.812	ENSPREG00000006938	iars	98	64.200	Poecilia_reticulata
ENSCSAVG00000008078	-	94	80.729	ENSPPYG00000019374	IARS	98	61.852	Pongo_abelii
ENSCSAVG00000008078	-	94	64.583	ENSPCAG00000013215	IARS	98	59.410	Procavia_capensis
ENSCSAVG00000008078	-	94	81.250	ENSPCOG00000017998	IARS	98	63.847	Propithecus_coquereli
ENSCSAVG00000008078	-	88	78.646	ENSPVAG00000010269	IARS	91	67.113	Pteropus_vampyrus
ENSCSAVG00000008078	-	95	82.812	ENSPNYG00000019391	iars	98	65.418	Pundamilia_nyererei
ENSCSAVG00000008078	-	94	81.771	ENSPNAG00000008441	iars	79	81.771	Pygocentrus_nattereri
ENSCSAVG00000008078	-	95	80.729	ENSRNOG00000014616	Iars	99	63.557	Rattus_norvegicus
ENSCSAVG00000008078	-	71	80.729	ENSRBIG00000038873	IARS	97	80.729	Rhinopithecus_bieti
ENSCSAVG00000008078	-	94	80.729	ENSRROG00000028942	IARS	80	82.927	Rhinopithecus_roxellana
ENSCSAVG00000008078	-	97	69.149	YBL076C	ILS1	93	69.149	Saccharomyces_cerevisiae
ENSCSAVG00000008078	-	94	71.875	ENSSBOG00000001596	IARS	98	61.973	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008078	-	91	84.177	ENSSHAG00000000237	IARS	79	84.177	Sarcophilus_harrisii
ENSCSAVG00000008078	-	94	80.208	ENSSFOG00015001874	iars	98	63.325	Scleropages_formosus
ENSCSAVG00000008078	-	94	81.250	ENSSMAG00000013630	iars	98	64.439	Scophthalmus_maximus
ENSCSAVG00000008078	-	94	81.771	ENSSDUG00000016007	iars	98	64.490	Seriola_dumerili
ENSCSAVG00000008078	-	94	81.771	ENSSLDG00000003987	iars	98	63.694	Seriola_lalandi_dorsalis
ENSCSAVG00000008078	-	94	72.917	ENSSARG00000010543	IARS	98	63.128	Sorex_araneus
ENSCSAVG00000008078	-	94	79.167	ENSSPUG00000002467	IARS	98	63.997	Sphenodon_punctatus
ENSCSAVG00000008078	-	94	82.292	ENSSPAG00000020176	iars	98	64.331	Stegastes_partitus
ENSCSAVG00000008078	-	94	80.208	ENSSSCG00000008068	IARS	99	80.208	Sus_scrofa
ENSCSAVG00000008078	-	94	79.688	ENSTGUG00000004410	IARS	98	64.519	Taeniopygia_guttata
ENSCSAVG00000008078	-	94	81.250	ENSTRUG00000007056	iars	98	64.462	Takifugu_rubripes
ENSCSAVG00000008078	-	94	82.292	ENSTNIG00000014814	iars	97	64.462	Tetraodon_nigroviridis
ENSCSAVG00000008078	-	73	80.469	ENSTBEG00000014010	IARS	71	79.545	Tupaia_belangeri
ENSCSAVG00000008078	-	94	78.646	ENSTTRG00000008240	IARS	98	60.845	Tursiops_truncatus
ENSCSAVG00000008078	-	94	80.208	ENSUAMG00000013778	IARS	98	63.796	Ursus_americanus
ENSCSAVG00000008078	-	94	80.208	ENSUMAG00000015456	IARS	86	80.208	Ursus_maritimus
ENSCSAVG00000008078	-	88	79.688	ENSVPAG00000008524	IARS	98	58.819	Vicugna_pacos
ENSCSAVG00000008078	-	94	79.688	ENSVVUG00000004144	IARS	98	63.687	Vulpes_vulpes
ENSCSAVG00000008078	-	99	60.887	ENSXETG00000020903	iars	98	60.828	Xenopus_tropicalis
ENSCSAVG00000008078	-	94	82.292	ENSXMAG00000017562	iars	98	62.565	Xiphophorus_maculatus