EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000008100 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
28897 bases
Position
chrreftig_76:1995169-2024065
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000013813CSDPF00313.221.6e-6115
ENSCSAVP00000013813CSDPF00313.221.6e-6125
ENSCSAVP00000013813CSDPF00313.221.6e-6135
ENSCSAVP00000013813CSDPF00313.221.6e-6145
ENSCSAVP00000013813CSDPF00313.221.6e-6155
ENSCSAVP00000013811CSDPF00313.223.3e-6115
ENSCSAVP00000013811CSDPF00313.223.3e-6125
ENSCSAVP00000013811CSDPF00313.223.3e-6135
ENSCSAVP00000013811CSDPF00313.223.3e-6145
ENSCSAVP00000013811CSDPF00313.223.3e-6155
ENSCSAVP00000013810CSDPF00313.224.9e-5715
ENSCSAVP00000013810CSDPF00313.224.9e-5725
ENSCSAVP00000013810CSDPF00313.224.9e-5735
ENSCSAVP00000013810CSDPF00313.224.9e-5745
ENSCSAVP00000013810CSDPF00313.224.9e-5755
ENSCSAVP00000013812CSDPF00313.226.5e-5715
ENSCSAVP00000013812CSDPF00313.226.5e-5725
ENSCSAVP00000013812CSDPF00313.226.5e-5735
ENSCSAVP00000013812CSDPF00313.226.5e-5745
ENSCSAVP00000013812CSDPF00313.226.5e-5755
ENSCSAVP00000013814CSDPF00313.221.8e-0911
ENSCSAVP00000013815CSDPF00313.221.8e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000013969-2941-ENSCSAVP00000013810797 (aa)-H2Z898
ENSCSAVT00000013970-2645-ENSCSAVP00000013811804 (aa)-H2Z899
ENSCSAVT00000013971-3176-ENSCSAVP00000013812760 (aa)-H2Z8A0
ENSCSAVT00000013972-2271-ENSCSAVP00000013813757 (aa)-H2Z8A1
ENSCSAVT00000013973-1192-ENSCSAVP00000013814192 (aa)-H2Z8A2
ENSCSAVT00000013974-1111-ENSCSAVP00000013815194 (aa)-H2Z8A3
Gene Model
Click here to download ENSCSAVG00000008100's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008100's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000008100-9842.503ENSG00000009307CSDE19950.000Homo_sapiens
ENSCSAVG00000008100-10042.536ENSAPOG00000015538csde19742.874Acanthochromis_polyacanthus
ENSCSAVG00000008100-9841.230ENSAMEG00000017129CSDE19041.230Ailuropoda_melanoleuca
ENSCSAVG00000008100-9243.370ENSACIG00000015175csde19943.370Amphilophus_citrinellus
ENSCSAVG00000008100-10041.951ENSAOCG00000011510csde19741.738Amphiprion_ocellaris
ENSCSAVG00000008100-10042.413ENSAPEG00000007194csde19742.651Amphiprion_percula
ENSCSAVG00000008100-9941.493ENSATEG00000003864csde19741.613Anabas_testudineus
ENSCSAVG00000008100-9841.284ENSAPLG00000008797CSDE19641.284Anas_platyrhynchos
ENSCSAVG00000008100-9843.159ENSACAG00000003120CSDE19643.159Anolis_carolinensis
ENSCSAVG00000008100-5940.075ENSANAG00000028396-8840.075Aotus_nancymaae
ENSCSAVG00000008100-9842.131ENSANAG00000024665CSDE19044.981Aotus_nancymaae
ENSCSAVG00000008100-10041.366ENSACLG00000013296csde19742.543Astatotilapia_calliptera
ENSCSAVG00000008100-9943.023ENSAMXG00000007436csde19643.023Astyanax_mexicanus
ENSCSAVG00000008100-9842.627ENSBTAG00000000678CSDE19642.222Bos_taurus
ENSCSAVG00000008100-9842.255ENSCJAG00000012565CSDE19142.503Callithrix_jacchus
ENSCSAVG00000008100-9842.092ENSCAFG00000009618CSDE19242.092Canis_familiaris
ENSCSAVG00000008100-9842.092ENSCAFG00020000481CSDE19642.092Canis_lupus_dingo
ENSCSAVG00000008100-9842.627ENSCHIG00000017250CSDE19642.222Capra_hircus
ENSCSAVG00000008100-9842.556ENSTSYG00000003747CSDE19642.556Carlito_syrichta
ENSCSAVG00000008100-9836.000ENSCAPG00000015128CSDE19636.000Cavia_aperea
ENSCSAVG00000008100-9840.149ENSCPOG00000040388CSDE19640.149Cavia_porcellus
ENSCSAVG00000008100-9842.255ENSCCAG00000036794CSDE19642.255Cebus_capucinus
ENSCSAVG00000008100-9930.889ENSCCAG00000030878-8631.279Cebus_capucinus
ENSCSAVG00000008100-9842.503ENSCATG00000036962CSDE19342.092Cercocebus_atys
ENSCSAVG00000008100-9842.503ENSCLAG00000006618CSDE19642.503Chinchilla_lanigera
ENSCSAVG00000008100-9842.503ENSCSAG00000001658CSDE19142.751Chlorocebus_sabaeus
ENSCSAVG00000008100-9552.632ENSCHOG00000000918CSDE18452.632Choloepus_hoffmanni
ENSCSAVG00000008100-9842.821ENSCPBG00000016547CSDE19642.821Chrysemys_picta_bellii
ENSCSAVG00000008100-10082.295ENSCING00000014465-9682.295Ciona_intestinalis
ENSCSAVG00000008100-9345.283ENSCANG00000031069-9345.283Colobus_angolensis_palliatus
ENSCSAVG00000008100-9842.751ENSCANG00000035096CSDE19342.092Colobus_angolensis_palliatus
ENSCSAVG00000008100-9832.944ENSCGRG00001014011-9732.944Cricetulus_griseus_chok1gshd
ENSCSAVG00000008100-9842.131ENSCGRG00001016833-9642.131Cricetulus_griseus_chok1gshd
ENSCSAVG00000008100-9842.373ENSCGRG00000005831-9642.373Cricetulus_griseus_crigri
ENSCSAVG00000008100-9940.132ENSCGRG00000002225-9640.529Cricetulus_griseus_crigri
ENSCSAVG00000008100-10041.727ENSCSEG00000002620csde19542.338Cynoglossus_semilaevis
ENSCSAVG00000008100-10041.516ENSCVAG00000001344csde19741.880Cyprinodon_variegatus
ENSCSAVG00000008100-9941.677ENSDARG00000074758csde19548.339Danio_rerio
ENSCSAVG00000008100-9841.754ENSDNOG00000010287-8941.754Dasypus_novemcinctus
ENSCSAVG00000008100-9842.503ENSDORG00000011609Csde19741.716Dipodomys_ordii
ENSCSAVG00000008100-9744.470FBgn0263352Unr7341.313Drosophila_melanogaster
ENSCSAVG00000008100-8237.323ENSETEG00000006280-9837.323Echinops_telfairi
ENSCSAVG00000008100-9952.632ENSETEG00000002491-6953.191Echinops_telfairi
ENSCSAVG00000008100-9833.333ENSETEG00000013678-9733.333Echinops_telfairi
ENSCSAVG00000008100-9941.169ENSEBUG00000008647csde19740.071Eptatretus_burgeri
ENSCSAVG00000008100-9842.999ENSEASG00005006284CSDE19642.999Equus_asinus_asinus
ENSCSAVG00000008100-9842.999ENSECAG00000020885CSDE19642.999Equus_caballus
ENSCSAVG00000008100-9545.395ENSEEUG00000006286CSDE16546.667Erinaceus_europaeus
ENSCSAVG00000008100-9941.294ENSELUG00000015507csde19740.793Esox_lucius
ENSCSAVG00000008100-9842.627ENSFCAG00000029266CSDE19642.222Felis_catus
ENSCSAVG00000008100-9842.164ENSFALG00000003407CSDE19642.164Ficedula_albicollis
ENSCSAVG00000008100-9842.503ENSFDAG00000007882CSDE19642.503Fukomys_damarensis
ENSCSAVG00000008100-10041.719ENSFHEG00000010799csde19941.108Fundulus_heteroclitus
ENSCSAVG00000008100-9942.649ENSGMOG00000012731csde19742.649Gadus_morhua
ENSCSAVG00000008100-9842.289ENSGALG00000002139CSDE19642.289Gallus_gallus
ENSCSAVG00000008100-9440.059ENSGAFG00000005241csde19440.059Gambusia_affinis
ENSCSAVG00000008100-10041.469ENSGACG00000004544csde19742.402Gasterosteus_aculeatus
ENSCSAVG00000008100-9843.142ENSGAGG00000017685CSDE19643.142Gopherus_agassizii
ENSCSAVG00000008100-9842.503ENSGGOG00000002164CSDE19840.273Gorilla_gorilla
ENSCSAVG00000008100-10041.466ENSHBUG00000020315csde19741.408Haplochromis_burtoni
ENSCSAVG00000008100-9937.082ENSHGLG00000008555-9637.275Heterocephalus_glaber_female
ENSCSAVG00000008100-9838.999ENSHGLG00000003829-9538.999Heterocephalus_glaber_female
ENSCSAVG00000008100-10036.465ENSHGLG00000010039-9536.465Heterocephalus_glaber_female
ENSCSAVG00000008100-9837.120ENSHGLG00000007471-9537.120Heterocephalus_glaber_female
ENSCSAVG00000008100-9936.591ENSHGLG00000019549-9636.757Heterocephalus_glaber_female
ENSCSAVG00000008100-9840.449ENSHGLG00000009620-9640.699Heterocephalus_glaber_female
ENSCSAVG00000008100-9937.176ENSHGLG00000000650-9543.005Heterocephalus_glaber_female
ENSCSAVG00000008100-10036.018ENSHGLG00100006910-9536.404Heterocephalus_glaber_male
ENSCSAVG00000008100-9937.484ENSHGLG00100002245-9637.484Heterocephalus_glaber_male
ENSCSAVG00000008100-9935.821ENSHGLG00100001846-9635.821Heterocephalus_glaber_male
ENSCSAVG00000008100-9634.737ENSHGLG00100004195-9735.989Heterocephalus_glaber_male
ENSCSAVG00000008100-9836.905ENSHGLG00100007287-9436.905Heterocephalus_glaber_male
ENSCSAVG00000008100-9935.683ENSHGLG00100004833-9535.683Heterocephalus_glaber_male
ENSCSAVG00000008100-9842.503ENSHGLG00100019438-9642.503Heterocephalus_glaber_male
ENSCSAVG00000008100-9936.052ENSHGLG00100012072-9737.582Heterocephalus_glaber_male
ENSCSAVG00000008100-10041.466ENSHCOG00000004158csde19740.874Hippocampus_comes
ENSCSAVG00000008100-9941.990ENSIPUG00000000355csde19742.894Ictalurus_punctatus
ENSCSAVG00000008100-8735.382ENSSTOG00000032722-9738.771Ictidomys_tridecemlineatus
ENSCSAVG00000008100-9934.827ENSSTOG00000030994-9634.827Ictidomys_tridecemlineatus
ENSCSAVG00000008100-9841.687ENSJJAG00000019571Csde19740.741Jaculus_jaculus
ENSCSAVG00000008100-9055.882ENSKMAG00000005685csde19742.073Kryptolebias_marmoratus
ENSCSAVG00000008100-10041.310ENSLBEG00000014770csde19741.101Labrus_bergylta
ENSCSAVG00000008100-9842.034ENSLACG00000018452CSDE19042.002Latimeria_chalumnae
ENSCSAVG00000008100-9943.154ENSLOCG00000010413csde19143.154Lepisosteus_oculatus
ENSCSAVG00000008100-9841.699ENSLAFG00000007150CSDE19241.699Loxodonta_africana
ENSCSAVG00000008100-9842.503ENSMFAG00000003674CSDE19642.092Macaca_fascicularis
ENSCSAVG00000008100-9842.503ENSMMUG00000001974CSDE19741.806Macaca_mulatta
ENSCSAVG00000008100-9842.503ENSMNEG00000045247CSDE19342.092Macaca_nemestrina
ENSCSAVG00000008100-9842.255ENSMLEG00000038673CSDE19142.503Mandrillus_leucophaeus
ENSCSAVG00000008100-10042.331ENSMAMG00000008821csde19741.806Mastacembelus_armatus
ENSCSAVG00000008100-10041.458ENSMZEG00005021675csde19741.161Maylandia_zebra
ENSCSAVG00000008100-9842.164ENSMGAG00000016381CSDE19642.164Meleagris_gallopavo
ENSCSAVG00000008100-9842.131ENSMAUG00000014031Csde19741.272Mesocricetus_auratus
ENSCSAVG00000008100-9940.864ENSMICG00000002050CSDE19540.749Microcebus_murinus
ENSCSAVG00000008100-9842.007ENSMOCG00000018960Csde19642.007Microtus_ochrogaster
ENSCSAVG00000008100-10040.248ENSMMOG00000015075csde19741.677Mola_mola
ENSCSAVG00000008100-9843.300ENSMODG00000004685CSDE19643.300Monodelphis_domestica
ENSCSAVG00000008100-9941.667ENSMALG00000007132csde19741.806Monopterus_albus
ENSCSAVG00000008100-9842.131MGP_CAROLIEiJ_G0025444Csde19158.228Mus_caroli
ENSCSAVG00000008100-9842.007ENSMUSG00000068823Csde19058.228Mus_musculus
ENSCSAVG00000008100-9842.007MGP_PahariEiJ_G0026888Csde19158.228Mus_pahari
ENSCSAVG00000008100-9842.007MGP_SPRETEiJ_G0026394Csde19158.228Mus_spretus
ENSCSAVG00000008100-9842.875ENSMPUG00000005753CSDE19842.875Mustela_putorius_furo
ENSCSAVG00000008100-9842.222ENSMLUG00000005681CSDE19042.222Myotis_lucifugus
ENSCSAVG00000008100-9841.884ENSNGAG00000021929Csde19740.976Nannospalax_galili
ENSCSAVG00000008100-10039.752ENSNBRG00000020808csde19741.161Neolamprologus_brichardi
ENSCSAVG00000008100-9842.503ENSNLEG00000004842CSDE19342.092Nomascus_leucogenys
ENSCSAVG00000008100-10040.498ENSMEUG00000002677CSDE19842.434Notamacropus_eugenii
ENSCSAVG00000008100-9952.632ENSOPRG00000005002CSDE17353.191Ochotona_princeps
ENSCSAVG00000008100-9842.007ENSODEG00000007383-9741.124Octodon_degus
ENSCSAVG00000008100-9732.743ENSODEG00000005979-9332.743Octodon_degus
ENSCSAVG00000008100-10040.709ENSONIG00000009309csde19741.877Oreochromis_niloticus
ENSCSAVG00000008100-9444.366ENSOANG00000003346-7244.366Ornithorhynchus_anatinus
ENSCSAVG00000008100-9842.627ENSOCUG00000016438CSDE19142.875Oryctolagus_cuniculus
ENSCSAVG00000008100-10040.859ENSORLG00000000707csde19741.646Oryzias_latipes
ENSCSAVG00000008100-10041.354ENSORLG00020005148csde19741.184Oryzias_latipes_hni
ENSCSAVG00000008100-10041.596ENSORLG00015019415csde19741.425Oryzias_latipes_hsok
ENSCSAVG00000008100-10041.928ENSOMEG00000015656csde19741.923Oryzias_melastigma
ENSCSAVG00000008100-9842.092ENSOGAG00000012127CSDE19042.092Otolemur_garnettii
ENSCSAVG00000008100-9842.222ENSOARG00000020034CSDE19042.222Ovis_aries
ENSCSAVG00000008100-9842.503ENSPPAG00000025861CSDE19642.092Pan_paniscus
ENSCSAVG00000008100-9842.627ENSPPRG00000006747CSDE19142.875Panthera_pardus
ENSCSAVG00000008100-9842.627ENSPTIG00000015468CSDE19642.627Panthera_tigris_altaica
ENSCSAVG00000008100-9842.503ENSPTRG00000033721CSDE19642.503Pan_troglodytes
ENSCSAVG00000008100-9842.503ENSPANG00000018873CSDE19642.092Papio_anubis
ENSCSAVG00000008100-9940.854ENSPKIG00000009459csde19741.055Paramormyrops_kingsleyae
ENSCSAVG00000008100-9346.309ENSPSIG00000003823CSDE19446.309Pelodiscus_sinensis
ENSCSAVG00000008100-10039.852ENSPMGG00000000772csde19740.678Periophthalmus_magnuspinnatus
ENSCSAVG00000008100-9842.131ENSPEMG00000020357-9642.131Peromyscus_maniculatus_bairdii
ENSCSAVG00000008100-9843.300ENSPCIG00000022587CSDE19643.300Phascolarctos_cinereus
ENSCSAVG00000008100-10039.574ENSPFOG00000012664csde19740.923Poecilia_formosa
ENSCSAVG00000008100-9939.602ENSPLAG00000017680csde19339.602Poecilia_latipinna
ENSCSAVG00000008100-9939.847ENSPMEG00000005094csde19539.847Poecilia_mexicana
ENSCSAVG00000008100-10041.276ENSPREG00000011631csde19740.785Poecilia_reticulata
ENSCSAVG00000008100-9842.627ENSPPYG00000000996CSDE19642.627Pongo_abelii
ENSCSAVG00000008100-9952.632ENSPCAG00000014368CSDE19152.632Procavia_capensis
ENSCSAVG00000008100-9335.662ENSPCOG00000008223-9139.241Propithecus_coquereli
ENSCSAVG00000008100-9841.961ENSPCOG00000017893CSDE19840.661Propithecus_coquereli
ENSCSAVG00000008100-9341.667ENSPVAG00000008225CSDE18541.667Pteropus_vampyrus
ENSCSAVG00000008100-10041.038ENSPNYG00000013745csde19741.408Pundamilia_nyererei
ENSCSAVG00000008100-9943.313ENSPNAG00000001958csde19642.672Pygocentrus_nattereri
ENSCSAVG00000008100-9842.007ENSRNOG00000061058Csde19642.007Rattus_norvegicus
ENSCSAVG00000008100-9940.863ENSRBIG00000038088-9740.053Rhinopithecus_bieti
ENSCSAVG00000008100-9840.131ENSRBIG00000038966-9040.131Rhinopithecus_bieti
ENSCSAVG00000008100-9842.503ENSRROG00000043101CSDE19342.092Rhinopithecus_roxellana
ENSCSAVG00000008100-9842.255ENSSBOG00000035592CSDE19142.503Saimiri_boliviensis_boliviensis
ENSCSAVG00000008100-9842.484ENSSHAG00000009831CSDE19642.484Sarcophilus_harrisii
ENSCSAVG00000008100-10040.915ENSSFOG00015007498csde19642.402Scleropages_formosus
ENSCSAVG00000008100-10044.280ENSSMAG00000007203csde19741.807Scophthalmus_maximus
ENSCSAVG00000008100-10042.312ENSSDUG00000015380csde19741.795Seriola_dumerili
ENSCSAVG00000008100-10042.092ENSSLDG00000008819csde19743.015Seriola_lalandi_dorsalis
ENSCSAVG00000008100-9841.885ENSSARG00000000738CSDE19041.885Sorex_araneus
ENSCSAVG00000008100-9843.035ENSSPUG00000008714CSDE19643.035Sphenodon_punctatus
ENSCSAVG00000008100-10042.055ENSSPAG00000000716csde19741.419Stegastes_partitus
ENSCSAVG00000008100-9842.627ENSSSCG00000006752CSDE19642.222Sus_scrofa
ENSCSAVG00000008100-9841.719ENSTGUG00000000972CSDE19641.719Taeniopygia_guttata
ENSCSAVG00000008100-10040.699ENSTRUG00000007996csde19542.000Takifugu_rubripes
ENSCSAVG00000008100-7048.263ENSTNIG00000010878csde19348.263Tetraodon_nigroviridis
ENSCSAVG00000008100-9842.092ENSTTRG00000015583CSDE19042.092Tursiops_truncatus
ENSCSAVG00000008100-9437.791ENSUAMG00000024289-9939.567Ursus_americanus
ENSCSAVG00000008100-9443.956ENSUAMG00000021779-10045.659Ursus_americanus
ENSCSAVG00000008100-9839.314ENSUMAG00000009720-9339.314Ursus_maritimus
ENSCSAVG00000008100-9939.070ENSUMAG00000011714-9439.486Ursus_maritimus
ENSCSAVG00000008100-9944.388ENSVPAG00000000749CSDE17747.631Vicugna_pacos
ENSCSAVG00000008100-9441.193ENSVVUG00000009890CSDE19241.193Vulpes_vulpes
ENSCSAVG00000008100-9942.086ENSXETG00000021448csde19742.086Xenopus_tropicalis
ENSCSAVG00000008100-9551.667ENSXCOG00000000035csde19951.667Xiphophorus_couchianus
ENSCSAVG00000008100-10041.516ENSXMAG00000009080csde19741.396Xiphophorus_maculatus

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