EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008110 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 12527 bases
Position: chrreftig_17:1488920-1501446
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000013830	DEAD	PF00270.29	5.6e-13	1	1
ENSCSAVP00000013831	HA2	PF04408.23	6.4e-22	1	1
ENSCSAVP00000013830	HA2	PF04408.23	8.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000013990	-	2439	-	ENSCSAVP00000013830	812 (aa)	-	H2Z8B8
ENSCSAVT00000013991	-	2115	-	ENSCSAVP00000013831	704 (aa)	-	H2Z8B9

Gene Model

Click here to download ENSCSAVG00000008110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008110	-	98	36.823	ENSCSAVG00000001493	-	64	48.352
ENSCSAVG00000008110	-	65	39.899	ENSCSAVG00000009685	-	76	40.404
ENSCSAVG00000008110	-	87	42.169	ENSCSAVG00000001117	-	98	42.308
ENSCSAVG00000008110	-	79	48.684	ENSCSAVG00000002918	-	56	44.231
ENSCSAVG00000008110	-	77	43.192	ENSCSAVG00000003870	-	70	43.192

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008110	-	99	53.163	ENSG00000174953	DHX36	98	58.120	Homo_sapiens
ENSCSAVG00000008110	-	99	51.474	ENSAPOG00000022391	dhx36	79	51.884	Acanthochromis_polyacanthus
ENSCSAVG00000008110	-	99	52.920	ENSAMEG00000011721	DHX36	79	52.920	Ailuropoda_melanoleuca
ENSCSAVG00000008110	-	99	51.217	ENSACIG00000016290	dhx36	92	51.217	Amphilophus_citrinellus
ENSCSAVG00000008110	-	99	50.973	ENSAOCG00000000046	dhx36	76	51.538	Amphiprion_ocellaris
ENSCSAVG00000008110	-	99	51.351	ENSAPEG00000001495	dhx36	75	51.538	Amphiprion_percula
ENSCSAVG00000008110	-	99	51.942	ENSATEG00000015441	dhx36	90	52.387	Anabas_testudineus
ENSCSAVG00000008110	-	99	52.427	ENSAPLG00000012597	DHX36	86	52.427	Anas_platyrhynchos
ENSCSAVG00000008110	-	99	48.396	ENSACAG00000006905	DHX36	79	47.485	Anolis_carolinensis
ENSCSAVG00000008110	-	99	53.041	ENSANAG00000020741	DHX36	87	53.041	Aotus_nancymaae
ENSCSAVG00000008110	-	99	51.273	ENSACLG00000014163	dhx36	87	51.870	Astatotilapia_calliptera
ENSCSAVG00000008110	-	99	52.369	ENSAMXG00000017365	dhx36	88	52.369	Astyanax_mexicanus
ENSCSAVG00000008110	-	99	53.006	ENSBTAG00000006142	DHX36	79	53.006	Bos_taurus
ENSCSAVG00000008110	-	99	52.920	ENSCJAG00000000986	DHX36	79	52.920	Callithrix_jacchus
ENSCSAVG00000008110	-	99	53.098	ENSCAFG00000008673	DHX36	71	53.098	Canis_familiaris
ENSCSAVG00000008110	-	99	52.530	ENSCAFG00020004966	DHX36	98	53.051	Canis_lupus_dingo
ENSCSAVG00000008110	-	99	53.129	ENSCHIG00000017463	DHX36	79	53.129	Capra_hircus
ENSCSAVG00000008110	-	99	52.883	ENSTSYG00000002377	DHX36	79	52.883	Carlito_syrichta
ENSCSAVG00000008110	-	99	44.512	ENSCAPG00000006238	DHX36	87	44.512	Cavia_aperea
ENSCSAVG00000008110	-	89	53.755	ENSCPOG00000007716	DHX36	78	53.649	Cavia_porcellus
ENSCSAVG00000008110	-	99	51.825	ENSCCAG00000035199	DHX36	79	51.825	Cebus_capucinus
ENSCSAVG00000008110	-	99	53.163	ENSCATG00000037545	DHX36	79	53.163	Cercocebus_atys
ENSCSAVG00000008110	-	99	53.041	ENSCLAG00000003610	DHX36	80	53.041	Chinchilla_lanigera
ENSCSAVG00000008110	-	99	53.163	ENSCSAG00000011962	DHX36	80	53.163	Chlorocebus_sabaeus
ENSCSAVG00000008110	-	99	48.724	ENSCHOG00000002340	DHX36	86	48.724	Choloepus_hoffmanni
ENSCSAVG00000008110	-	99	52.311	ENSCPBG00000018783	DHX36	82	52.311	Chrysemys_picta_bellii
ENSCSAVG00000008110	-	66	79.938	ENSCING00000002018	-	99	79.938	Ciona_intestinalis
ENSCSAVG00000008110	-	99	53.041	ENSCANG00000040120	DHX36	79	53.041	Colobus_angolensis_palliatus
ENSCSAVG00000008110	-	99	53.341	ENSCGRG00001013722	Dhx36	80	53.341	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008110	-	99	53.341	ENSCGRG00000005229	Dhx36	82	53.220	Cricetulus_griseus_crigri
ENSCSAVG00000008110	-	100	48.126	ENSCSEG00000013424	dhx36	78	48.126	Cynoglossus_semilaevis
ENSCSAVG00000008110	-	99	51.644	ENSCVAG00000005470	dhx36	75	51.883	Cyprinodon_variegatus
ENSCSAVG00000008110	-	99	50.898	ENSDARG00000101059	dhx36	78	50.898	Danio_rerio
ENSCSAVG00000008110	-	98	44.699	ENSDNOG00000001682	DHX36	78	41.787	Dasypus_novemcinctus
ENSCSAVG00000008110	-	99	53.163	ENSDORG00000004848	Dhx36	83	53.163	Dipodomys_ordii
ENSCSAVG00000008110	-	99	37.623	FBgn0032883	Rhau	83	37.623	Drosophila_melanogaster
ENSCSAVG00000008110	-	99	44.180	ENSETEG00000009104	DHX36	81	43.971	Echinops_telfairi
ENSCSAVG00000008110	-	88	49.482	ENSEBUG00000005040	-	86	49.482	Eptatretus_burgeri
ENSCSAVG00000008110	-	99	52.190	ENSEASG00005020682	DHX36	78	52.190	Equus_asinus_asinus
ENSCSAVG00000008110	-	99	51.825	ENSECAG00000025100	DHX36	78	51.825	Equus_caballus
ENSCSAVG00000008110	-	95	53.530	ENSEEUG00000010430	DHX36	75	53.886	Erinaceus_europaeus
ENSCSAVG00000008110	-	99	50.730	ENSELUG00000009181	dhx36	83	50.748	Esox_lucius
ENSCSAVG00000008110	-	99	53.098	ENSFCAG00000004860	DHX36	79	53.098	Felis_catus
ENSCSAVG00000008110	-	99	52.619	ENSFALG00000005045	DHX36	86	52.619	Ficedula_albicollis
ENSCSAVG00000008110	-	99	52.920	ENSFDAG00000005896	DHX36	80	52.920	Fukomys_damarensis
ENSCSAVG00000008110	-	99	45.756	ENSFHEG00000000896	dhx36	74	45.890	Fundulus_heteroclitus
ENSCSAVG00000008110	-	99	50.184	ENSGMOG00000013947	dhx36	81	50.246	Gadus_morhua
ENSCSAVG00000008110	-	99	52.433	ENSGALG00000043082	DHX36	81	52.433	Gallus_gallus
ENSCSAVG00000008110	-	99	51.401	ENSGAFG00000013829	dhx36	89	50.183	Gambusia_affinis
ENSCSAVG00000008110	-	99	51.332	ENSGACG00000010276	dhx36	79	51.332	Gasterosteus_aculeatus
ENSCSAVG00000008110	-	95	52.888	ENSGAGG00000000294	DHX36	81	52.888	Gopherus_agassizii
ENSCSAVG00000008110	-	99	53.163	ENSGGOG00000034937	DHX36	79	53.163	Gorilla_gorilla
ENSCSAVG00000008110	-	99	51.578	ENSHBUG00000015199	dhx36	87	52.120	Haplochromis_burtoni
ENSCSAVG00000008110	-	99	52.555	ENSHGLG00000017407	DHX36	79	52.555	Heterocephalus_glaber_female
ENSCSAVG00000008110	-	99	52.555	ENSHGLG00100003204	DHX36	80	52.555	Heterocephalus_glaber_male
ENSCSAVG00000008110	-	99	49.635	ENSHCOG00000003686	dhx36	81	49.878	Hippocampus_comes
ENSCSAVG00000008110	-	79	66.667	ENSIPUG00000010835	dhx36	74	60.733	Ictalurus_punctatus
ENSCSAVG00000008110	-	99	53.098	ENSSTOG00000003917	DHX36	80	53.098	Ictidomys_tridecemlineatus
ENSCSAVG00000008110	-	99	52.920	ENSJJAG00000014564	Dhx36	81	52.920	Jaculus_jaculus
ENSCSAVG00000008110	-	99	52.184	ENSKMAG00000019498	dhx36	91	49.029	Kryptolebias_marmoratus
ENSCSAVG00000008110	-	98	51.415	ENSLBEG00000023465	dhx36	73	51.415	Labrus_bergylta
ENSCSAVG00000008110	-	99	52.855	ENSLACG00000016218	DHX36	82	53.220	Latimeria_chalumnae
ENSCSAVG00000008110	-	99	51.332	ENSLOCG00000002125	dhx36	81	51.460	Lepisosteus_oculatus
ENSCSAVG00000008110	-	99	52.741	ENSLAFG00000015342	DHX36	81	52.619	Loxodonta_africana
ENSCSAVG00000008110	-	99	53.163	ENSMFAG00000032288	DHX36	79	53.163	Macaca_fascicularis
ENSCSAVG00000008110	-	99	53.285	ENSMMUG00000011347	DHX36	79	53.285	Macaca_mulatta
ENSCSAVG00000008110	-	99	53.163	ENSMNEG00000039762	DHX36	79	53.163	Macaca_nemestrina
ENSCSAVG00000008110	-	99	53.163	ENSMLEG00000032839	DHX36	79	53.163	Mandrillus_leucophaeus
ENSCSAVG00000008110	-	99	50.545	ENSMAMG00000013131	dhx36	89	50.877	Mastacembelus_armatus
ENSCSAVG00000008110	-	99	51.394	ENSMZEG00005001607	dhx36	88	52.136	Maylandia_zebra
ENSCSAVG00000008110	-	99	52.415	ENSMGAG00000010853	DHX36	94	52.415	Meleagris_gallopavo
ENSCSAVG00000008110	-	99	53.220	ENSMAUG00000000158	Dhx36	80	53.220	Mesocricetus_auratus
ENSCSAVG00000008110	-	99	52.798	ENSMICG00000049093	DHX36	79	52.798	Microcebus_murinus
ENSCSAVG00000008110	-	99	53.220	ENSMOCG00000006684	Dhx36	80	53.220	Microtus_ochrogaster
ENSCSAVG00000008110	-	96	51.884	ENSMMOG00000013033	dhx36	86	51.884	Mola_mola
ENSCSAVG00000008110	-	99	53.027	ENSMODG00000015820	DHX36	79	53.027	Monodelphis_domestica
ENSCSAVG00000008110	-	86	60.976	ENSMALG00000010405	dhx36	77	46.739	Monopterus_albus
ENSCSAVG00000008110	-	99	52.798	MGP_CAROLIEiJ_G0025032	Dhx36	80	52.798	Mus_caroli
ENSCSAVG00000008110	-	99	52.798	ENSMUSG00000027770	Dhx36	80	52.798	Mus_musculus
ENSCSAVG00000008110	-	99	52.676	MGP_PahariEiJ_G0026476	Dhx36	80	52.676	Mus_pahari
ENSCSAVG00000008110	-	99	52.798	MGP_SPRETEiJ_G0025972	Dhx36	80	52.798	Mus_spretus
ENSCSAVG00000008110	-	99	52.798	ENSMPUG00000002723	DHX36	79	52.798	Mustela_putorius_furo
ENSCSAVG00000008110	-	99	53.252	ENSMLUG00000002318	DHX36	79	53.252	Myotis_lucifugus
ENSCSAVG00000008110	-	99	52.855	ENSNGAG00000015307	Dhx36	79	52.855	Nannospalax_galili
ENSCSAVG00000008110	-	97	51.557	ENSNBRG00000002239	dhx36	87	51.995	Neolamprologus_brichardi
ENSCSAVG00000008110	-	99	53.106	ENSNLEG00000003640	DHX36	79	53.106	Nomascus_leucogenys
ENSCSAVG00000008110	-	74	68.235	ENSMEUG00000001499	DHX36	55	68.235	Notamacropus_eugenii
ENSCSAVG00000008110	-	65	59.155	ENSOPRG00000000175	DHX36	52	59.155	Ochotona_princeps
ENSCSAVG00000008110	-	99	53.497	ENSODEG00000000935	DHX36	79	53.497	Octodon_degus
ENSCSAVG00000008110	-	99	51.152	ENSONIG00000003546	dhx36	78	51.211	Oreochromis_niloticus
ENSCSAVG00000008110	-	99	53.034	ENSOANG00000007079	-	86	53.034	Ornithorhynchus_anatinus
ENSCSAVG00000008110	-	99	52.883	ENSOCUG00000001180	DHX36	79	52.883	Oryctolagus_cuniculus
ENSCSAVG00000008110	-	99	51.640	ENSORLG00000005842	dhx36	93	51.351	Oryzias_latipes
ENSCSAVG00000008110	-	99	51.762	ENSORLG00020004665	dhx36	90	51.759	Oryzias_latipes_hni
ENSCSAVG00000008110	-	99	51.784	ENSORLG00015007188	dhx36	83	51.884	Oryzias_latipes_hsok
ENSCSAVG00000008110	-	99	51.276	ENSOMEG00000011032	dhx36	76	51.538	Oryzias_melastigma
ENSCSAVG00000008110	-	99	52.977	ENSOGAG00000011256	DHX36	80	52.977	Otolemur_garnettii
ENSCSAVG00000008110	-	99	53.129	ENSOARG00000003508	DHX36	75	53.129	Ovis_aries
ENSCSAVG00000008110	-	99	53.497	ENSPPAG00000020323	DHX36	79	53.497	Pan_paniscus
ENSCSAVG00000008110	-	99	52.977	ENSPPRG00000002879	DHX36	79	52.977	Panthera_pardus
ENSCSAVG00000008110	-	99	53.098	ENSPTIG00000018478	DHX36	82	53.098	Panthera_tigris_altaica
ENSCSAVG00000008110	-	99	53.163	ENSPTRG00000015548	DHX36	79	53.163	Pan_troglodytes
ENSCSAVG00000008110	-	99	53.163	ENSPANG00000007914	DHX36	79	53.163	Papio_anubis
ENSCSAVG00000008110	-	99	50.424	ENSPKIG00000009943	dhx36	92	51.005	Paramormyrops_kingsleyae
ENSCSAVG00000008110	-	99	52.311	ENSPSIG00000012755	DHX36	88	52.612	Pelodiscus_sinensis
ENSCSAVG00000008110	-	98	49.691	ENSPMGG00000013858	dhx36	90	49.691	Periophthalmus_magnuspinnatus
ENSCSAVG00000008110	-	99	53.098	ENSPEMG00000010012	Dhx36	80	53.098	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008110	-	71	51.111	ENSPMAG00000004056	-	100	51.111	Petromyzon_marinus
ENSCSAVG00000008110	-	99	53.632	ENSPCIG00000000045	DHX36	79	53.632	Phascolarctos_cinereus
ENSCSAVG00000008110	-	99	51.766	ENSPFOG00000009598	dhx36	75	51.766	Poecilia_formosa
ENSCSAVG00000008110	-	99	51.766	ENSPLAG00000011061	dhx36	75	51.766	Poecilia_latipinna
ENSCSAVG00000008110	-	99	51.523	ENSPMEG00000008396	dhx36	75	51.523	Poecilia_mexicana
ENSCSAVG00000008110	-	99	51.766	ENSPREG00000002966	dhx36	76	51.766	Poecilia_reticulata
ENSCSAVG00000008110	-	99	53.440	ENSPPYG00000014222	-	98	53.440	Pongo_abelii
ENSCSAVG00000008110	-	78	55.140	ENSPCOG00000028384	-	86	51.606	Propithecus_coquereli
ENSCSAVG00000008110	-	56	61.905	ENSPCOG00000011695	-	65	61.905	Propithecus_coquereli
ENSCSAVG00000008110	-	85	56.863	ENSPVAG00000008465	DHX36	71	56.863	Pteropus_vampyrus
ENSCSAVG00000008110	-	81	61.429	ENSPNYG00000007679	dhx36	67	61.429	Pundamilia_nyererei
ENSCSAVG00000008110	-	86	67.500	ENSPNAG00000013972	dhx36	78	51.758	Pygocentrus_nattereri
ENSCSAVG00000008110	-	99	52.491	ENSRNOG00000014599	Dhx36	80	52.491	Rattus_norvegicus
ENSCSAVG00000008110	-	99	50.365	ENSRBIG00000044638	DHX36	79	50.243	Rhinopithecus_bieti
ENSCSAVG00000008110	-	99	53.163	ENSRROG00000036472	DHX36	87	53.163	Rhinopithecus_roxellana
ENSCSAVG00000008110	-	99	52.676	ENSSBOG00000024666	DHX36	79	52.676	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008110	-	99	52.644	ENSSHAG00000016292	DHX36	86	52.644	Sarcophilus_harrisii
ENSCSAVG00000008110	-	88	64.583	ENSSFOG00015019533	dhx36	85	53.325	Scleropages_formosus
ENSCSAVG00000008110	-	99	51.825	ENSSMAG00000011914	dhx36	80	52.375	Scophthalmus_maximus
ENSCSAVG00000008110	-	99	51.888	ENSSDUG00000023657	dhx36	80	51.304	Seriola_dumerili
ENSCSAVG00000008110	-	65	52.442	ENSSLDG00000015494	dhx36	93	53.004	Seriola_lalandi_dorsalis
ENSCSAVG00000008110	-	99	41.457	ENSSARG00000006396	-	88	44.701	Sorex_araneus
ENSCSAVG00000008110	-	95	53.846	ENSSPUG00000000785	-	88	53.846	Sphenodon_punctatus
ENSCSAVG00000008110	-	99	51.474	ENSSPAG00000022168	dhx36	89	51.481	Stegastes_partitus
ENSCSAVG00000008110	-	99	52.433	ENSSSCG00000024916	DHX36	87	52.433	Sus_scrofa
ENSCSAVG00000008110	-	99	52.491	ENSTGUG00000011317	DHX36	87	52.491	Taeniopygia_guttata
ENSCSAVG00000008110	-	99	52.068	ENSTRUG00000001230	dhx36	91	52.094	Takifugu_rubripes
ENSCSAVG00000008110	-	99	51.338	ENSTNIG00000007692	dhx36	80	51.397	Tetraodon_nigroviridis
ENSCSAVG00000008110	-	98	50.554	ENSTBEG00000013495	DHX36	79	50.490	Tupaia_belangeri
ENSCSAVG00000008110	-	99	52.068	ENSTTRG00000016883	DHX36	78	52.393	Tursiops_truncatus
ENSCSAVG00000008110	-	95	53.402	ENSUAMG00000017002	DHX36	79	53.402	Ursus_americanus
ENSCSAVG00000008110	-	99	52.676	ENSUMAG00000011908	DHX36	87	52.676	Ursus_maritimus
ENSCSAVG00000008110	-	99	51.166	ENSVPAG00000004046	DHX36	79	51.166	Vicugna_pacos
ENSCSAVG00000008110	-	99	53.098	ENSVVUG00000024516	DHX36	80	53.098	Vulpes_vulpes
ENSCSAVG00000008110	-	99	51.699	ENSXETG00000007768	dhx36	81	51.699	Xenopus_tropicalis
ENSCSAVG00000008110	-	99	51.035	ENSXCOG00000011687	dhx36	77	50.976	Xiphophorus_couchianus
ENSCSAVG00000008110	-	99	51.644	ENSXMAG00000001490	dhx36	87	49.061	Xiphophorus_maculatus