EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008239 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4247 bases
Position: chrreftig_49:1170747-1174993
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014040	zf-met	PF12874.7	1.5e-06	1	1
ENSCSAVP00000014040	zf-C2H2_jaz	PF12171.8	4.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014202	-	964	-	ENSCSAVP00000014040	194 (aa)	-	H2Z8X5

Gene Model

Click here to download ENSCSAVG00000008239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008239	-	94	67.368	ENSG00000146007	ZMAT2	98	94.231	Homo_sapiens
ENSCSAVG00000008239	-	94	64.021	ENSAPOG00000004818	zmat2	75	69.536	Acanthochromis_polyacanthus
ENSCSAVG00000008239	-	94	67.368	ENSAMEG00000010766	ZMAT2	75	72.368	Ailuropoda_melanoleuca
ENSCSAVG00000008239	-	94	64.894	ENSACIG00000007914	zmat2	75	70.667	Amphilophus_citrinellus
ENSCSAVG00000008239	-	94	64.021	ENSAOCG00000016267	zmat2	75	69.536	Amphiprion_ocellaris
ENSCSAVG00000008239	-	94	64.021	ENSAPEG00000008887	zmat2	75	69.536	Amphiprion_percula
ENSCSAVG00000008239	-	99	62.312	ENSATEG00000009724	zmat2	80	67.081	Anabas_testudineus
ENSCSAVG00000008239	-	94	66.842	ENSACAG00000012747	ZMAT2	75	72.368	Anolis_carolinensis
ENSCSAVG00000008239	-	94	67.368	ENSANAG00000028921	ZMAT2	75	72.368	Aotus_nancymaae
ENSCSAVG00000008239	-	94	64.550	ENSACLG00000001243	zmat2	80	65.839	Astatotilapia_calliptera
ENSCSAVG00000008239	-	61	62.295	ENSACLG00000015635	-	86	62.295	Astatotilapia_calliptera
ENSCSAVG00000008239	-	94	64.550	ENSACLG00000000982	zmat2	80	65.839	Astatotilapia_calliptera
ENSCSAVG00000008239	-	94	67.368	ENSAMXG00000042537	zmat2	75	71.711	Astyanax_mexicanus
ENSCSAVG00000008239	-	94	67.368	ENSBTAG00000005441	ZMAT2	75	72.368	Bos_taurus
ENSCSAVG00000008239	-	94	66.316	ENSCJAG00000021456	-	75	71.711	Callithrix_jacchus
ENSCSAVG00000008239	-	94	67.368	ENSCJAG00000016231	-	75	72.368	Callithrix_jacchus
ENSCSAVG00000008239	-	94	67.368	ENSCAFG00000005907	ZMAT2	75	72.368	Canis_familiaris
ENSCSAVG00000008239	-	94	67.368	ENSCAFG00020000423	ZMAT2	75	72.368	Canis_lupus_dingo
ENSCSAVG00000008239	-	97	65.816	ENSCHIG00000014775	ZMAT2	78	70.253	Capra_hircus
ENSCSAVG00000008239	-	94	67.368	ENSTSYG00000035442	-	75	72.368	Carlito_syrichta
ENSCSAVG00000008239	-	99	49.239	ENSTSYG00000032797	-	77	49.686	Carlito_syrichta
ENSCSAVG00000008239	-	94	67.368	ENSCPOG00000037729	ZMAT2	75	72.368	Cavia_porcellus
ENSCSAVG00000008239	-	94	67.368	ENSCCAG00000024723	ZMAT2	75	72.368	Cebus_capucinus
ENSCSAVG00000008239	-	94	67.368	ENSCLAG00000017314	ZMAT2	75	72.368	Chinchilla_lanigera
ENSCSAVG00000008239	-	94	67.368	ENSCSAG00000012639	ZMAT2	75	72.368	Chlorocebus_sabaeus
ENSCSAVG00000008239	-	74	67.347	ENSCHOG00000007795	ZMAT2	92	67.347	Choloepus_hoffmanni
ENSCSAVG00000008239	-	94	66.842	ENSCPBG00000007718	ZMAT2	75	72.368	Chrysemys_picta_bellii
ENSCSAVG00000008239	-	55	75.701	ENSCING00000016227	-	99	75.701	Ciona_intestinalis
ENSCSAVG00000008239	-	94	67.368	ENSCANG00000039567	ZMAT2	75	72.368	Colobus_angolensis_palliatus
ENSCSAVG00000008239	-	94	67.368	ENSCGRG00001023749	Zmat2	75	72.368	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008239	-	94	67.368	ENSCGRG00000013756	Zmat2	75	72.368	Cricetulus_griseus_crigri
ENSCSAVG00000008239	-	99	60.302	ENSCSEG00000006694	zmat2	73	64.596	Cynoglossus_semilaevis
ENSCSAVG00000008239	-	94	65.079	ENSCVAG00000003489	zmat2	80	67.081	Cyprinodon_variegatus
ENSCSAVG00000008239	-	94	66.316	ENSDARG00000004956	zmat2	75	69.737	Danio_rerio
ENSCSAVG00000008239	-	60	74.167	ENSDNOG00000015171	ZMAT2	67	86.585	Dasypus_novemcinctus
ENSCSAVG00000008239	-	94	48.947	ENSDORG00000014559	Zmat2	56	67.347	Dipodomys_ordii
ENSCSAVG00000008239	-	95	66.138	FBgn0035520	CG11586	76	70.470	Drosophila_melanogaster
ENSCSAVG00000008239	-	94	64.737	ENSETEG00000005406	-	75	69.737	Echinops_telfairi
ENSCSAVG00000008239	-	56	66.055	ENSEBUG00000015463	-	64	63.793	Eptatretus_burgeri
ENSCSAVG00000008239	-	94	67.368	ENSEASG00005018047	ZMAT2	75	72.368	Equus_asinus_asinus
ENSCSAVG00000008239	-	94	67.368	ENSECAG00000014412	ZMAT2	75	72.368	Equus_caballus
ENSCSAVG00000008239	-	73	72.414	ENSEEUG00000007861	ZMAT2	93	72.414	Erinaceus_europaeus
ENSCSAVG00000008239	-	94	61.828	ENSELUG00000021857	zmat2	77	69.427	Esox_lucius
ENSCSAVG00000008239	-	94	67.368	ENSFCAG00000001289	ZMAT2	75	72.368	Felis_catus
ENSCSAVG00000008239	-	94	62.032	ENSFALG00000014244	-	75	69.128	Ficedula_albicollis
ENSCSAVG00000008239	-	94	66.842	ENSFALG00000008988	-	75	72.368	Ficedula_albicollis
ENSCSAVG00000008239	-	94	67.368	ENSFDAG00000008372	ZMAT2	75	72.368	Fukomys_damarensis
ENSCSAVG00000008239	-	99	61.576	ENSFHEG00000016999	zmat2	80	67.081	Fundulus_heteroclitus
ENSCSAVG00000008239	-	77	68.667	ENSGMOG00000003032	zmat2	97	68.667	Gadus_morhua
ENSCSAVG00000008239	-	94	66.842	ENSGALG00000041746	ZMAT2	75	72.368	Gallus_gallus
ENSCSAVG00000008239	-	94	65.608	ENSGAFG00000009807	zmat2	80	67.081	Gambusia_affinis
ENSCSAVG00000008239	-	99	62.312	ENSGACG00000020892	zmat2	80	67.081	Gasterosteus_aculeatus
ENSCSAVG00000008239	-	94	66.842	ENSGAGG00000008849	ZMAT2	75	72.368	Gopherus_agassizii
ENSCSAVG00000008239	-	94	67.368	ENSGGOG00000005121	ZMAT2	75	72.368	Gorilla_gorilla
ENSCSAVG00000008239	-	88	62.857	ENSHBUG00000019195	zmat2	58	76.923	Haplochromis_burtoni
ENSCSAVG00000008239	-	72	63.380	ENSHBUG00000021068	-	80	59.627	Haplochromis_burtoni
ENSCSAVG00000008239	-	94	62.434	ENSHBUG00000021112	-	73	67.550	Haplochromis_burtoni
ENSCSAVG00000008239	-	94	67.368	ENSHGLG00000008187	-	75	72.368	Heterocephalus_glaber_female
ENSCSAVG00000008239	-	94	67.368	ENSHGLG00100002997	-	75	72.368	Heterocephalus_glaber_male
ENSCSAVG00000008239	-	94	64.021	ENSHCOG00000002199	zmat2	72	65.839	Hippocampus_comes
ENSCSAVG00000008239	-	94	66.316	ENSIPUG00000024080	Zmat2	75	70.395	Ictalurus_punctatus
ENSCSAVG00000008239	-	94	67.368	ENSSTOG00000002025	ZMAT2	75	72.368	Ictidomys_tridecemlineatus
ENSCSAVG00000008239	-	94	67.368	ENSJJAG00000003703	-	75	72.368	Jaculus_jaculus
ENSCSAVG00000008239	-	99	61.809	ENSKMAG00000005411	zmat2	80	66.460	Kryptolebias_marmoratus
ENSCSAVG00000008239	-	99	62.312	ENSLBEG00000002013	zmat2	80	67.081	Labrus_bergylta
ENSCSAVG00000008239	-	94	66.842	ENSLACG00000001030	ZMAT2	75	71.711	Latimeria_chalumnae
ENSCSAVG00000008239	-	96	67.358	ENSLOCG00000011219	zmat2	65	70.968	Lepisosteus_oculatus
ENSCSAVG00000008239	-	94	67.368	ENSLAFG00000018601	ZMAT2	75	72.368	Loxodonta_africana
ENSCSAVG00000008239	-	94	67.368	ENSMFAG00000037329	ZMAT2	75	72.368	Macaca_fascicularis
ENSCSAVG00000008239	-	94	67.368	ENSMMUG00000004484	ZMAT2	75	72.368	Macaca_mulatta
ENSCSAVG00000008239	-	94	67.368	ENSMNEG00000031600	ZMAT2	75	72.368	Macaca_nemestrina
ENSCSAVG00000008239	-	94	67.368	ENSMLEG00000041320	ZMAT2	75	72.368	Mandrillus_leucophaeus
ENSCSAVG00000008239	-	99	61.307	ENSMAMG00000022430	zmat2	80	65.839	Mastacembelus_armatus
ENSCSAVG00000008239	-	94	64.550	ENSMZEG00005027828	zmat2	80	65.839	Maylandia_zebra
ENSCSAVG00000008239	-	94	62.434	ENSMZEG00005001274	-	80	63.975	Maylandia_zebra
ENSCSAVG00000008239	-	94	66.842	ENSMGAG00000000843	ZMAT2	75	72.368	Meleagris_gallopavo
ENSCSAVG00000008239	-	94	46.907	ENSMAUG00000016579	Zmat2	50	66.327	Mesocricetus_auratus
ENSCSAVG00000008239	-	94	67.368	ENSMICG00000042843	ZMAT2	75	72.368	Microcebus_murinus
ENSCSAVG00000008239	-	94	63.978	ENSMOCG00000012659	Zmat2	74	68.919	Microtus_ochrogaster
ENSCSAVG00000008239	-	99	62.312	ENSMMOG00000016831	zmat2	80	67.081	Mola_mola
ENSCSAVG00000008239	-	94	67.368	ENSMODG00000011277	-	75	72.368	Monodelphis_domestica
ENSCSAVG00000008239	-	94	67.368	ENSMODG00000011269	-	75	72.368	Monodelphis_domestica
ENSCSAVG00000008239	-	99	61.809	ENSMALG00000009668	zmat2	80	66.460	Monopterus_albus
ENSCSAVG00000008239	-	94	67.368	MGP_CAROLIEiJ_G0022140	Zmat2	75	72.368	Mus_caroli
ENSCSAVG00000008239	-	94	67.368	ENSMUSG00000001383	Zmat2	75	72.368	Mus_musculus
ENSCSAVG00000008239	-	94	67.368	MGP_PahariEiJ_G0018874	Zmat2	75	72.368	Mus_pahari
ENSCSAVG00000008239	-	94	67.368	MGP_SPRETEiJ_G0023052	Zmat2	75	72.368	Mus_spretus
ENSCSAVG00000008239	-	94	67.368	ENSMPUG00000008383	ZMAT2	75	72.368	Mustela_putorius_furo
ENSCSAVG00000008239	-	94	67.895	ENSMLUG00000017525	ZMAT2	75	72.368	Myotis_lucifugus
ENSCSAVG00000008239	-	94	67.368	ENSNGAG00000009406	Zmat2	75	72.368	Nannospalax_galili
ENSCSAVG00000008239	-	94	64.550	ENSNBRG00000017902	zmat2	80	65.839	Neolamprologus_brichardi
ENSCSAVG00000008239	-	73	72.414	ENSMEUG00000001757	ZMAT2	93	72.414	Notamacropus_eugenii
ENSCSAVG00000008239	-	94	67.368	ENSODEG00000002444	ZMAT2	75	72.368	Octodon_degus
ENSCSAVG00000008239	-	94	63.158	ENSONIG00000017873	zmat2	80	64.198	Oreochromis_niloticus
ENSCSAVG00000008239	-	79	69.872	ENSOANG00000007213	ZMAT2	69	77.966	Ornithorhynchus_anatinus
ENSCSAVG00000008239	-	94	67.368	ENSOCUG00000004255	ZMAT2	75	72.368	Oryctolagus_cuniculus
ENSCSAVG00000008239	-	94	65.608	ENSORLG00000024293	zmat2	80	67.081	Oryzias_latipes
ENSCSAVG00000008239	-	94	65.608	ENSORLG00020003239	zmat2	80	67.081	Oryzias_latipes_hni
ENSCSAVG00000008239	-	94	65.608	ENSORLG00015007715	zmat2	80	67.081	Oryzias_latipes_hsok
ENSCSAVG00000008239	-	94	65.079	ENSOMEG00000017427	zmat2	75	66.460	Oryzias_melastigma
ENSCSAVG00000008239	-	94	67.368	ENSOGAG00000002054	ZMAT2	75	72.368	Otolemur_garnettii
ENSCSAVG00000008239	-	94	67.368	ENSOARG00000018690	ZMAT2	75	72.368	Ovis_aries
ENSCSAVG00000008239	-	94	67.368	ENSPPAG00000034165	ZMAT2	75	72.368	Pan_paniscus
ENSCSAVG00000008239	-	94	67.368	ENSPPRG00000004163	ZMAT2	75	72.368	Panthera_pardus
ENSCSAVG00000008239	-	94	67.368	ENSPTIG00000008652	ZMAT2	75	72.368	Panthera_tigris_altaica
ENSCSAVG00000008239	-	94	67.368	ENSPTRG00000017327	ZMAT2	75	72.368	Pan_troglodytes
ENSCSAVG00000008239	-	94	61.579	ENSPANG00000032021	ZMAT2	73	72.414	Papio_anubis
ENSCSAVG00000008239	-	94	66.842	ENSPKIG00000017778	zmat2	75	70.395	Paramormyrops_kingsleyae
ENSCSAVG00000008239	-	60	73.333	ENSPSIG00000003832	ZMAT2	67	86.585	Pelodiscus_sinensis
ENSCSAVG00000008239	-	94	66.129	ENSPMGG00000005845	zmat2	75	72.297	Periophthalmus_magnuspinnatus
ENSCSAVG00000008239	-	94	67.368	ENSPEMG00000010300	Zmat2	75	72.368	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008239	-	94	67.368	ENSPCIG00000021080	ZMAT2	75	72.368	Phascolarctos_cinereus
ENSCSAVG00000008239	-	99	62.814	ENSPFOG00000002482	zmat2	80	67.081	Poecilia_formosa
ENSCSAVG00000008239	-	99	62.814	ENSPLAG00000019239	zmat2	80	67.081	Poecilia_latipinna
ENSCSAVG00000008239	-	99	62.814	ENSPMEG00000024343	zmat2	80	67.081	Poecilia_mexicana
ENSCSAVG00000008239	-	94	67.368	ENSPPYG00000015866	ZMAT2	75	72.368	Pongo_abelii
ENSCSAVG00000008239	-	94	67.368	ENSPCAG00000001604	ZMAT2	75	72.368	Procavia_capensis
ENSCSAVG00000008239	-	94	67.368	ENSPCOG00000020829	ZMAT2	75	72.368	Propithecus_coquereli
ENSCSAVG00000008239	-	94	67.368	ENSPVAG00000009717	ZMAT2	75	72.368	Pteropus_vampyrus
ENSCSAVG00000008239	-	94	64.550	ENSPNYG00000022503	zmat2	80	65.839	Pundamilia_nyererei
ENSCSAVG00000008239	-	94	67.368	ENSPNAG00000013716	zmat2	75	71.711	Pygocentrus_nattereri
ENSCSAVG00000008239	-	94	66.842	ENSRNOG00000016016	Zmat2	75	72.368	Rattus_norvegicus
ENSCSAVG00000008239	-	94	67.368	ENSRBIG00000031072	ZMAT2	75	72.368	Rhinopithecus_bieti
ENSCSAVG00000008239	-	94	67.368	ENSRROG00000032700	ZMAT2	75	72.368	Rhinopithecus_roxellana
ENSCSAVG00000008239	-	94	67.368	ENSSBOG00000025911	ZMAT2	75	72.368	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008239	-	94	67.368	ENSSHAG00000016524	ZMAT2	75	72.368	Sarcophilus_harrisii
ENSCSAVG00000008239	-	94	66.842	ENSSFOG00015022982	zmat2	75	71.053	Scleropages_formosus
ENSCSAVG00000008239	-	94	65.608	ENSSMAG00000011152	zmat2	75	71.523	Scophthalmus_maximus
ENSCSAVG00000008239	-	99	61.809	ENSSDUG00000023365	zmat2	80	66.460	Seriola_dumerili
ENSCSAVG00000008239	-	99	61.809	ENSSLDG00000008752	zmat2	80	66.460	Seriola_lalandi_dorsalis
ENSCSAVG00000008239	-	94	67.368	ENSSARG00000005898	ZMAT2	75	72.368	Sorex_araneus
ENSCSAVG00000008239	-	94	66.842	ENSSPUG00000000256	ZMAT2	75	72.368	Sphenodon_punctatus
ENSCSAVG00000008239	-	99	61.307	ENSSPAG00000011593	zmat2	80	65.839	Stegastes_partitus
ENSCSAVG00000008239	-	94	67.368	ENSSSCG00000029158	ZMAT2	75	72.368	Sus_scrofa
ENSCSAVG00000008239	-	94	66.842	ENSTGUG00000001696	ZMAT2	75	72.368	Taeniopygia_guttata
ENSCSAVG00000008239	-	99	61.809	ENSTRUG00000008262	zmat2	80	66.460	Takifugu_rubripes
ENSCSAVG00000008239	-	99	61.307	ENSTNIG00000007599	zmat2	80	66.460	Tetraodon_nigroviridis
ENSCSAVG00000008239	-	76	69.737	ENSUAMG00000004654	ZMAT2	74	72.414	Ursus_americanus
ENSCSAVG00000008239	-	94	67.368	ENSUMAG00000012852	ZMAT2	75	72.368	Ursus_maritimus
ENSCSAVG00000008239	-	94	67.368	ENSVVUG00000017308	ZMAT2	75	72.368	Vulpes_vulpes
ENSCSAVG00000008239	-	94	50.526	ENSXETG00000016118	zmat2	83	51.351	Xenopus_tropicalis
ENSCSAVG00000008239	-	94	65.608	ENSXMAG00000024441	zmat2	80	66.049	Xiphophorus_maculatus