EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008241 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 13058 bases
Position: chrreftig_49:1175331-1188388
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014043	dsrm	PF00035.26	4.9e-16	1	2
ENSCSAVP00000014043	dsrm	PF00035.26	4.9e-16	2	2
ENSCSAVP00000014044	dsrm	PF00035.26	5e-16	1	2
ENSCSAVP00000014044	dsrm	PF00035.26	5e-16	2	2
ENSCSAVP00000014042	dsrm	PF00035.26	2.7e-07	1	1
ENSCSAVP00000014043	A_deamin	PF02137.18	6e-97	1	1
ENSCSAVP00000014044	A_deamin	PF02137.18	6.3e-97	1	1
ENSCSAVP00000014042	SAP	PF02037.27	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014206	-	2077	-	ENSCSAVP00000014044	655 (aa)	-	H2Z8X9
ENSCSAVT00000014205	-	2016	-	ENSCSAVP00000014043	649 (aa)	-	H2Z8X8
ENSCSAVT00000014204	-	891	-	ENSCSAVP00000014042	291 (aa)	-	H2Z8X7

Gene Model

Click here to download ENSCSAVG00000008241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008241	-	53	33.333	ENSCSAVG00000001315	-	71	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008241	-	98	40.183	FBgn0026086	Adar	94	40.000	Drosophila_melanogaster