EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008252 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8350 bases
Position: chrreftig_19:1457606-1465955
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014067	DRIM	PF07539.12	3.6e-103	1	2
ENSCSAVP00000014067	DRIM	PF07539.12	3.6e-103	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014229	-	7500	-	ENSCSAVP00000014067	2500 (aa)	-	H2Z902

Gene Model

Click here to download ENSCSAVG00000008252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008252	-	99	30.466	ENSG00000120800	UTP20	93	30.466	Homo_sapiens
ENSCSAVG00000008252	-	100	30.596	ENSAPOG00000002429	utp20	94	31.105	Acanthochromis_polyacanthus
ENSCSAVG00000008252	-	99	31.087	ENSAMEG00000016416	UTP20	93	31.232	Ailuropoda_melanoleuca
ENSCSAVG00000008252	-	100	31.039	ENSACIG00000007987	utp20	92	31.606	Amphilophus_citrinellus
ENSCSAVG00000008252	-	95	30.368	ENSAPEG00000011605	utp20	92	30.564	Amphiprion_percula
ENSCSAVG00000008252	-	99	30.501	ENSAPLG00000015651	UTP20	93	30.428	Anas_platyrhynchos
ENSCSAVG00000008252	-	99	30.686	ENSACAG00000011671	UTP20	93	30.880	Anolis_carolinensis
ENSCSAVG00000008252	-	93	34.038	ENSACLG00000008064	utp20	93	34.038	Astatotilapia_calliptera
ENSCSAVG00000008252	-	99	30.238	ENSAMXG00000021039	utp20	95	30.592	Astyanax_mexicanus
ENSCSAVG00000008252	-	97	31.645	ENSBTAG00000003239	UTP20	93	31.645	Bos_taurus
ENSCSAVG00000008252	-	99	30.909	ENSCJAG00000001913	UTP20	93	30.909	Callithrix_jacchus
ENSCSAVG00000008252	-	97	31.077	ENSCAFG00000006964	UTP20	93	31.077	Canis_familiaris
ENSCSAVG00000008252	-	97	31.077	ENSCAFG00020024305	UTP20	93	31.077	Canis_lupus_dingo
ENSCSAVG00000008252	-	97	31.483	ENSCHIG00000009221	UTP20	93	31.126	Capra_hircus
ENSCSAVG00000008252	-	99	30.448	ENSTSYG00000003040	UTP20	93	30.594	Carlito_syrichta
ENSCSAVG00000008252	-	97	30.849	ENSCAPG00000014920	UTP20	93	30.849	Cavia_aperea
ENSCSAVG00000008252	-	97	31.707	ENSCPOG00000003129	UTP20	93	31.707	Cavia_porcellus
ENSCSAVG00000008252	-	99	30.473	ENSCCAG00000031422	UTP20	94	30.425	Cebus_capucinus
ENSCSAVG00000008252	-	99	30.029	ENSCATG00000035636	UTP20	93	30.248	Cercocebus_atys
ENSCSAVG00000008252	-	97	32.294	ENSCLAG00000011569	UTP20	93	32.368	Chinchilla_lanigera
ENSCSAVG00000008252	-	99	30.584	ENSCSAG00000003388	UTP20	93	30.803	Chlorocebus_sabaeus
ENSCSAVG00000008252	-	66	44.444	ENSCHOG00000003532	UTP20	64	44.444	Choloepus_hoffmanni
ENSCSAVG00000008252	-	89	41.026	ENSCPBG00000004844	UTP20	96	31.525	Chrysemys_picta_bellii
ENSCSAVG00000008252	-	99	65.956	ENSCING00000003395	-	96	65.956	Ciona_intestinalis
ENSCSAVG00000008252	-	94	32.123	ENSCANG00000034768	UTP20	92	32.123	Colobus_angolensis_palliatus
ENSCSAVG00000008252	-	99	30.432	ENSCGRG00001017151	Utp20	93	30.625	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008252	-	99	30.539	ENSCGRG00000008595	Utp20	93	30.736	Cricetulus_griseus_crigri
ENSCSAVG00000008252	-	97	30.615	ENSCSEG00000014760	utp20	92	30.969	Cynoglossus_semilaevis
ENSCSAVG00000008252	-	99	30.642	ENSCVAG00000001727	utp20	92	30.642	Cyprinodon_variegatus
ENSCSAVG00000008252	-	99	31.663	ENSDNOG00000016845	UTP20	93	31.663	Dasypus_novemcinctus
ENSCSAVG00000008252	-	99	31.283	ENSDORG00000014762	Utp20	93	31.283	Dipodomys_ordii
ENSCSAVG00000008252	-	75	50.407	ENSETEG00000019983	UTP20	74	50.407	Echinops_telfairi
ENSCSAVG00000008252	-	82	46.186	ENSEASG00005019981	UTP20	81	46.186	Equus_asinus_asinus
ENSCSAVG00000008252	-	97	31.232	ENSECAG00000006876	UTP20	81	46.186	Equus_caballus
ENSCSAVG00000008252	-	59	37.853	ENSEEUG00000003774	UTP20	57	37.853	Erinaceus_europaeus
ENSCSAVG00000008252	-	99	30.825	ENSFCAG00000006150	UTP20	93	31.042	Felis_catus
ENSCSAVG00000008252	-	93	31.291	ENSFALG00000011135	UTP20	93	31.364	Ficedula_albicollis
ENSCSAVG00000008252	-	84	46.753	ENSFHEG00000004142	utp20	90	46.753	Fundulus_heteroclitus
ENSCSAVG00000008252	-	99	31.159	ENSGALG00000011643	UTP20	95	31.132	Gallus_gallus
ENSCSAVG00000008252	-	66	32.241	ENSGAGG00000011169	UTP20	90	32.241	Gopherus_agassizii
ENSCSAVG00000008252	-	99	30.466	ENSGGOG00000004904	UTP20	93	30.466	Gorilla_gorilla
ENSCSAVG00000008252	-	99	31.724	ENSHGLG00000006422	UTP20	93	31.724	Heterocephalus_glaber_female
ENSCSAVG00000008252	-	97	30.897	ENSHGLG00100001086	UTP20	93	30.897	Heterocephalus_glaber_male
ENSCSAVG00000008252	-	93	30.467	ENSHCOG00000005421	utp20	91	30.912	Hippocampus_comes
ENSCSAVG00000008252	-	99	30.574	ENSIPUG00000013717	utp20	93	30.719	Ictalurus_punctatus
ENSCSAVG00000008252	-	99	30.792	ENSSTOG00000015995	UTP20	93	30.937	Ictidomys_tridecemlineatus
ENSCSAVG00000008252	-	99	30.330	ENSJJAG00000019321	Utp20	93	30.499	Jaculus_jaculus
ENSCSAVG00000008252	-	86	44.583	ENSKMAG00000005972	utp20	92	31.121	Kryptolebias_marmoratus
ENSCSAVG00000008252	-	80	36.170	ENSLOCG00000015197	utp20	85	36.170	Lepisosteus_oculatus
ENSCSAVG00000008252	-	99	30.384	ENSLAFG00000012983	UTP20	93	31.255	Loxodonta_africana
ENSCSAVG00000008252	-	99	30.511	ENSMFAG00000037766	UTP20	93	30.584	Macaca_fascicularis
ENSCSAVG00000008252	-	99	30.511	ENSMMUG00000012891	UTP20	93	30.584	Macaca_mulatta
ENSCSAVG00000008252	-	100	30.676	ENSMZEG00005018123	utp20	92	31.174	Maylandia_zebra
ENSCSAVG00000008252	-	99	31.032	ENSMGAG00000011726	UTP20	95	31.004	Meleagris_gallopavo
ENSCSAVG00000008252	-	99	30.369	ENSMOCG00000015242	Utp20	93	30.513	Microtus_ochrogaster
ENSCSAVG00000008252	-	88	30.058	ENSMMOG00000003360	utp20	86	30.253	Mola_mola
ENSCSAVG00000008252	-	99	30.036	ENSMODG00000003141	UTP20	93	30.065	Monodelphis_domestica
ENSCSAVG00000008252	-	100	31.030	ENSMALG00000002723	utp20	96	31.102	Monopterus_albus
ENSCSAVG00000008252	-	97	30.375	MGP_CAROLIEiJ_G0015713	Utp20	93	30.519	Mus_caroli
ENSCSAVG00000008252	-	97	30.303	ENSMUSG00000004356	Utp20	93	30.447	Mus_musculus
ENSCSAVG00000008252	-	99	30.303	MGP_PahariEiJ_G0031372	Utp20	93	30.231	Mus_pahari
ENSCSAVG00000008252	-	97	30.159	MGP_SPRETEiJ_G0016531	Utp20	93	30.303	Mus_spretus
ENSCSAVG00000008252	-	99	31.495	ENSMPUG00000011641	UTP20	93	31.713	Mustela_putorius_furo
ENSCSAVG00000008252	-	99	31.304	ENSMLUG00000002313	UTP20	94	31.304	Myotis_lucifugus
ENSCSAVG00000008252	-	99	30.181	ENSNGAG00000013738	Utp20	93	30.181	Nannospalax_galili
ENSCSAVG00000008252	-	62	54.717	ENSNBRG00000019464	utp20	77	54.717	Neolamprologus_brichardi
ENSCSAVG00000008252	-	99	30.926	ENSNLEG00000006166	UTP20	93	30.926	Nomascus_leucogenys
ENSCSAVG00000008252	-	78	30.343	ENSMEUG00000015457	UTP20	76	30.605	Notamacropus_eugenii
ENSCSAVG00000008252	-	73	49.020	ENSOPRG00000010546	UTP20	67	49.020	Ochotona_princeps
ENSCSAVG00000008252	-	97	31.361	ENSODEG00000013411	UTP20	93	31.361	Octodon_degus
ENSCSAVG00000008252	-	99	32.228	ENSONIG00000009910	utp20	92	30.913	Oreochromis_niloticus
ENSCSAVG00000008252	-	99	30.747	ENSOANG00000005578	UTP20	93	30.892	Ornithorhynchus_anatinus
ENSCSAVG00000008252	-	99	30.663	ENSOCUG00000010475	UTP20	93	30.736	Oryctolagus_cuniculus
ENSCSAVG00000008252	-	88	36.915	ENSORLG00000008900	utp20	86	36.915	Oryzias_latipes
ENSCSAVG00000008252	-	90	36.639	ENSORLG00020005879	utp20	89	36.639	Oryzias_latipes_hni
ENSCSAVG00000008252	-	99	30.378	ENSOGAG00000015130	UTP20	93	30.378	Otolemur_garnettii
ENSCSAVG00000008252	-	99	31.583	ENSOARG00000014722	UTP20	93	31.583	Ovis_aries
ENSCSAVG00000008252	-	99	30.539	ENSPPAG00000001381	UTP20	93	30.539	Pan_paniscus
ENSCSAVG00000008252	-	99	30.897	ENSPPRG00000001026	UTP20	93	30.970	Panthera_pardus
ENSCSAVG00000008252	-	99	30.897	ENSPTIG00000020972	UTP20	93	30.970	Panthera_tigris_altaica
ENSCSAVG00000008252	-	99	30.539	ENSPTRG00000005349	UTP20	93	30.539	Pan_troglodytes
ENSCSAVG00000008252	-	99	30.730	ENSPANG00000020388	UTP20	93	30.949	Papio_anubis
ENSCSAVG00000008252	-	94	30.814	ENSPSIG00000016689	UTP20	96	30.959	Pelodiscus_sinensis
ENSCSAVG00000008252	-	99	31.195	ENSPMGG00000004066	utp20	91	31.412	Periophthalmus_magnuspinnatus
ENSCSAVG00000008252	-	99	30.769	ENSPEMG00000024120	Utp20	93	31.062	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008252	-	99	31.781	ENSPCIG00000009298	UTP20	93	30.830	Phascolarctos_cinereus
ENSCSAVG00000008252	-	92	30.558	ENSPFOG00000003312	utp20	92	30.702	Poecilia_formosa
ENSCSAVG00000008252	-	90	31.638	ENSPPYG00000004871	UTP20	93	31.638	Pongo_abelii
ENSCSAVG00000008252	-	56	36.471	ENSPCAG00000012791	UTP20	54	36.471	Procavia_capensis
ENSCSAVG00000008252	-	97	31.045	ENSPVAG00000008113	UTP20	90	31.045	Pteropus_vampyrus
ENSCSAVG00000008252	-	100	30.325	ENSPNYG00000011561	utp20	92	31.047	Pundamilia_nyererei
ENSCSAVG00000008252	-	99	30.072	ENSPNAG00000006176	utp20	95	30.432	Pygocentrus_nattereri
ENSCSAVG00000008252	-	99	30.657	ENSRROG00000041254	UTP20	93	30.876	Rhinopithecus_roxellana
ENSCSAVG00000008252	-	95	30.764	ENSSBOG00000035762	UTP20	93	30.764	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008252	-	98	30.088	ENSSHAG00000002298	UTP20	96	30.088	Sarcophilus_harrisii
ENSCSAVG00000008252	-	97	30.344	ENSSFOG00015001674	utp20	95	30.942	Scleropages_formosus
ENSCSAVG00000008252	-	95	30.305	ENSSLDG00000012844	utp20	91	30.618	Seriola_lalandi_dorsalis
ENSCSAVG00000008252	-	99	31.034	ENSSPUG00000004513	UTP20	93	31.034	Sphenodon_punctatus
ENSCSAVG00000008252	-	99	30.438	ENSSPAG00000014674	utp20	95	30.937	Stegastes_partitus
ENSCSAVG00000008252	-	97	30.859	ENSSSCG00000000869	UTP20	93	30.859	Sus_scrofa
ENSCSAVG00000008252	-	77	31.354	ENSTGUG00000009053	-	94	32.182	Taeniopygia_guttata
ENSCSAVG00000008252	-	97	30.646	ENSTRUG00000005849	utp20	94	30.864	Takifugu_rubripes
ENSCSAVG00000008252	-	97	30.412	ENSTNIG00000006921	utp20	93	31.042	Tetraodon_nigroviridis
ENSCSAVG00000008252	-	93	31.442	ENSTTRG00000017195	UTP20	89	31.442	Tursiops_truncatus
ENSCSAVG00000008252	-	99	31.232	ENSUAMG00000016363	UTP20	93	31.377	Ursus_americanus
ENSCSAVG00000008252	-	99	30.797	ENSUMAG00000000077	UTP20	93	30.942	Ursus_maritimus
ENSCSAVG00000008252	-	72	36.269	ENSVPAG00000011620	UTP20	81	31.032	Vicugna_pacos
ENSCSAVG00000008252	-	97	31.100	ENSVVUG00000018110	UTP20	93	31.318	Vulpes_vulpes
ENSCSAVG00000008252	-	88	36.873	ENSXMAG00000006503	utp20	96	30.408	Xiphophorus_maculatus