EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008256 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 327 bases
Position: chrreftig_19:1468953-1469279
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014073	RNA_POL_M_15KD	PF02150.16	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014235	-	327	-	ENSCSAVP00000014073	108 (aa)	-	H2Z908

Gene Model

Click here to download ENSCSAVG00000008256's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008256	-	100	79.630	ENSG00000161980	POLR3K	100	79.630	Homo_sapiens
ENSCSAVG00000008256	-	100	82.407	ENSAPOG00000023908	polr3k	100	82.407	Acanthochromis_polyacanthus
ENSCSAVG00000008256	-	100	78.704	ENSAMEG00000006776	POLR3K	100	78.704	Ailuropoda_melanoleuca
ENSCSAVG00000008256	-	100	81.481	ENSACIG00000023296	polr3k	100	81.481	Amphilophus_citrinellus
ENSCSAVG00000008256	-	100	82.407	ENSAOCG00000022121	polr3k	100	82.407	Amphiprion_ocellaris
ENSCSAVG00000008256	-	100	59.603	ENSAPEG00000011600	polr3k	100	59.603	Amphiprion_percula
ENSCSAVG00000008256	-	100	81.481	ENSATEG00000004474	polr3k	100	81.481	Anabas_testudineus
ENSCSAVG00000008256	-	100	79.630	ENSANAG00000024313	POLR3K	100	79.630	Aotus_nancymaae
ENSCSAVG00000008256	-	100	80.556	ENSAMXG00000039818	polr3k	100	80.556	Astyanax_mexicanus
ENSCSAVG00000008256	-	100	78.704	ENSBTAG00000019803	POLR3K	100	78.704	Bos_taurus
ENSCSAVG00000008256	-	100	79.630	ENSCJAG00000011568	POLR3K	100	79.630	Callithrix_jacchus
ENSCSAVG00000008256	-	100	79.630	ENSCAFG00000019715	POLR3K	100	79.630	Canis_familiaris
ENSCSAVG00000008256	-	100	79.630	ENSCAFG00020009353	POLR3K	100	79.630	Canis_lupus_dingo
ENSCSAVG00000008256	-	100	78.704	ENSCPOG00000038538	POLR3K	100	78.704	Cavia_porcellus
ENSCSAVG00000008256	-	100	79.630	ENSCCAG00000036420	POLR3K	100	79.630	Cebus_capucinus
ENSCSAVG00000008256	-	100	79.630	ENSCATG00000044779	POLR3K	100	79.630	Cercocebus_atys
ENSCSAVG00000008256	-	100	78.704	ENSCLAG00000015623	POLR3K	100	78.704	Chinchilla_lanigera
ENSCSAVG00000008256	-	100	79.630	ENSCSAG00000013189	POLR3K	100	79.630	Chlorocebus_sabaeus
ENSCSAVG00000008256	-	100	80.556	ENSCHOG00000011936	POLR3K	100	80.556	Choloepus_hoffmanni
ENSCSAVG00000008256	-	100	79.630	ENSCPBG00000026407	POLR3K	53	79.630	Chrysemys_picta_bellii
ENSCSAVG00000008256	-	100	94.444	ENSCING00000018769	polr3k	100	94.444	Ciona_intestinalis
ENSCSAVG00000008256	-	100	79.630	ENSCANG00000014572	POLR3K	100	79.630	Colobus_angolensis_palliatus
ENSCSAVG00000008256	-	100	79.630	ENSCGRG00001000491	Polr3k	100	79.630	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008256	-	100	79.630	ENSCGRG00000008002	Polr3k	100	79.630	Cricetulus_griseus_crigri
ENSCSAVG00000008256	-	100	81.481	ENSCSEG00000010369	polr3k	100	81.481	Cynoglossus_semilaevis
ENSCSAVG00000008256	-	100	81.481	ENSCVAG00000015750	polr3k	100	81.481	Cyprinodon_variegatus
ENSCSAVG00000008256	-	100	80.556	ENSDARG00000037835	polr3k	100	80.556	Danio_rerio
ENSCSAVG00000008256	-	100	69.444	FBgn0061362	CG33785	100	69.444	Drosophila_melanogaster
ENSCSAVG00000008256	-	100	79.630	ENSETEG00000009989	POLR3K	100	79.630	Echinops_telfairi
ENSCSAVG00000008256	-	100	83.333	ENSEBUG00000014194	polr3k	100	83.333	Eptatretus_burgeri
ENSCSAVG00000008256	-	100	78.704	ENSEASG00005017858	POLR3K	100	78.704	Equus_asinus_asinus
ENSCSAVG00000008256	-	100	78.704	ENSECAG00000024929	POLR3K	100	78.704	Equus_caballus
ENSCSAVG00000008256	-	100	82.407	ENSELUG00000021625	polr3k	100	82.407	Esox_lucius
ENSCSAVG00000008256	-	100	79.630	ENSFCAG00000038431	POLR3K	100	79.630	Felis_catus
ENSCSAVG00000008256	-	99	78.505	ENSFALG00000004058	POLR3K	96	78.505	Ficedula_albicollis
ENSCSAVG00000008256	-	100	77.778	ENSFDAG00000001608	POLR3K	100	77.778	Fukomys_damarensis
ENSCSAVG00000008256	-	100	81.481	ENSFHEG00000000757	polr3k	100	81.481	Fundulus_heteroclitus
ENSCSAVG00000008256	-	100	78.704	ENSGMOG00000004334	polr3k	100	78.704	Gadus_morhua
ENSCSAVG00000008256	-	100	78.704	ENSGALG00000017681	POLR3K	100	78.704	Gallus_gallus
ENSCSAVG00000008256	-	100	80.556	ENSGAFG00000017933	polr3k	100	80.556	Gambusia_affinis
ENSCSAVG00000008256	-	100	79.630	ENSGACG00000013978	polr3k	100	79.630	Gasterosteus_aculeatus
ENSCSAVG00000008256	-	100	79.630	ENSGAGG00000024229	POLR3K	53	79.630	Gopherus_agassizii
ENSCSAVG00000008256	-	100	79.630	ENSGGOG00000008500	POLR3K	100	79.630	Gorilla_gorilla
ENSCSAVG00000008256	-	100	81.481	ENSHBUG00000000079	polr3k	100	81.481	Haplochromis_burtoni
ENSCSAVG00000008256	-	100	78.704	ENSHGLG00000002434	POLR3K	100	78.704	Heterocephalus_glaber_female
ENSCSAVG00000008256	-	100	78.704	ENSHGLG00100004679	POLR3K	100	78.704	Heterocephalus_glaber_male
ENSCSAVG00000008256	-	100	78.704	ENSHCOG00000007116	polr3k	100	78.704	Hippocampus_comes
ENSCSAVG00000008256	-	100	81.481	ENSIPUG00000011366	polr3k	100	81.481	Ictalurus_punctatus
ENSCSAVG00000008256	-	100	78.704	ENSSTOG00000022940	POLR3K	100	78.704	Ictidomys_tridecemlineatus
ENSCSAVG00000008256	-	100	79.630	ENSJJAG00000022791	Polr3k	100	79.630	Jaculus_jaculus
ENSCSAVG00000008256	-	100	80.556	ENSKMAG00000018692	polr3k	100	80.556	Kryptolebias_marmoratus
ENSCSAVG00000008256	-	100	82.407	ENSLACG00000014660	POLR3K	100	82.407	Latimeria_chalumnae
ENSCSAVG00000008256	-	100	81.481	ENSLOCG00000007584	polr3k	100	81.481	Lepisosteus_oculatus
ENSCSAVG00000008256	-	100	79.630	ENSLAFG00000026907	POLR3K	100	79.630	Loxodonta_africana
ENSCSAVG00000008256	-	100	79.630	ENSMFAG00000041536	POLR3K	100	79.630	Macaca_fascicularis
ENSCSAVG00000008256	-	100	79.630	ENSMMUG00000000586	POLR3K	100	79.630	Macaca_mulatta
ENSCSAVG00000008256	-	100	78.704	ENSMLEG00000040084	POLR3K	100	78.704	Mandrillus_leucophaeus
ENSCSAVG00000008256	-	100	81.481	ENSMAMG00000002908	polr3k	100	81.481	Mastacembelus_armatus
ENSCSAVG00000008256	-	100	81.481	ENSMZEG00005022452	polr3k	100	81.481	Maylandia_zebra
ENSCSAVG00000008256	-	100	79.630	ENSMAUG00000010035	-	100	79.630	Mesocricetus_auratus
ENSCSAVG00000008256	-	100	77.778	ENSMICG00000031366	-	100	77.778	Microcebus_murinus
ENSCSAVG00000008256	-	100	69.444	ENSMICG00000027063	-	100	69.444	Microcebus_murinus
ENSCSAVG00000008256	-	100	79.630	ENSMOCG00000014307	Polr3k	100	79.630	Microtus_ochrogaster
ENSCSAVG00000008256	-	100	81.481	ENSMMOG00000014830	polr3k	100	81.481	Mola_mola
ENSCSAVG00000008256	-	100	81.481	ENSMALG00000020770	polr3k	100	81.481	Monopterus_albus
ENSCSAVG00000008256	-	100	79.630	MGP_CAROLIEiJ_G0024823	Polr3k	100	79.630	Mus_caroli
ENSCSAVG00000008256	-	100	79.630	ENSMUSG00000038628	Polr3k	100	79.630	Mus_musculus
ENSCSAVG00000008256	-	100	79.630	MGP_PahariEiJ_G0026271	Polr3k	100	79.630	Mus_pahari
ENSCSAVG00000008256	-	100	79.630	MGP_SPRETEiJ_G0025750	Polr3k	100	79.630	Mus_spretus
ENSCSAVG00000008256	-	100	79.630	ENSMLUG00000015593	POLR3K	100	79.630	Myotis_lucifugus
ENSCSAVG00000008256	-	100	79.630	ENSNGAG00000016438	Polr3k	100	79.630	Nannospalax_galili
ENSCSAVG00000008256	-	100	79.630	ENSNLEG00000007943	POLR3K	100	79.630	Nomascus_leucogenys
ENSCSAVG00000008256	-	100	77.778	ENSOPRG00000005506	POLR3K	100	77.778	Ochotona_princeps
ENSCSAVG00000008256	-	100	78.704	ENSODEG00000015558	POLR3K	100	78.704	Octodon_degus
ENSCSAVG00000008256	-	100	81.481	ENSONIG00000001424	polr3k	100	81.481	Oreochromis_niloticus
ENSCSAVG00000008256	-	100	75.000	ENSOCUG00000022824	-	100	75.000	Oryctolagus_cuniculus
ENSCSAVG00000008256	-	100	79.630	ENSOCUG00000013608	POLR3K	100	79.630	Oryctolagus_cuniculus
ENSCSAVG00000008256	-	100	79.630	ENSORLG00000026165	polr3k	100	79.630	Oryzias_latipes
ENSCSAVG00000008256	-	100	80.556	ENSORLG00020005190	polr3k	100	80.556	Oryzias_latipes_hni
ENSCSAVG00000008256	-	100	80.556	ENSORLG00015018330	polr3k	100	80.556	Oryzias_latipes_hsok
ENSCSAVG00000008256	-	100	80.556	ENSOMEG00000023979	polr3k	100	80.556	Oryzias_melastigma
ENSCSAVG00000008256	-	100	80.556	ENSOGAG00000002526	-	100	80.556	Otolemur_garnettii
ENSCSAVG00000008256	-	99	78.505	ENSOARG00000010407	POLR3K	95	78.505	Ovis_aries
ENSCSAVG00000008256	-	100	79.630	ENSPPAG00000038313	POLR3K	100	79.630	Pan_paniscus
ENSCSAVG00000008256	-	100	79.630	ENSPPRG00000014063	POLR3K	100	79.630	Panthera_pardus
ENSCSAVG00000008256	-	100	78.704	ENSPTIG00000013600	POLR3K	100	78.704	Panthera_tigris_altaica
ENSCSAVG00000008256	-	100	79.630	ENSPTRG00000007525	POLR3K	100	79.630	Pan_troglodytes
ENSCSAVG00000008256	-	100	79.630	ENSPANG00000006340	POLR3K	100	79.630	Papio_anubis
ENSCSAVG00000008256	-	100	81.481	ENSPKIG00000020663	polr3k	100	81.481	Paramormyrops_kingsleyae
ENSCSAVG00000008256	-	100	81.481	ENSPMGG00000004235	polr3k	100	81.481	Periophthalmus_magnuspinnatus
ENSCSAVG00000008256	-	100	79.630	ENSPCIG00000026349	POLR3K	100	79.630	Phascolarctos_cinereus
ENSCSAVG00000008256	-	100	81.481	ENSPFOG00000010720	polr3k	100	81.481	Poecilia_formosa
ENSCSAVG00000008256	-	100	81.481	ENSPLAG00000002402	polr3k	100	81.481	Poecilia_latipinna
ENSCSAVG00000008256	-	100	81.481	ENSPMEG00000019096	polr3k	100	81.481	Poecilia_mexicana
ENSCSAVG00000008256	-	100	81.481	ENSPREG00000007842	polr3k	100	81.481	Poecilia_reticulata
ENSCSAVG00000008256	-	100	59.259	ENSPPYG00000006893	-	100	59.259	Pongo_abelii
ENSCSAVG00000008256	-	100	58.333	ENSPCAG00000009454	POLR3K	100	58.333	Procavia_capensis
ENSCSAVG00000008256	-	100	79.630	ENSPCOG00000018678	POLR3K	100	79.630	Propithecus_coquereli
ENSCSAVG00000008256	-	100	79.630	ENSPVAG00000000530	POLR3K	100	79.630	Pteropus_vampyrus
ENSCSAVG00000008256	-	100	81.481	ENSPNYG00000007973	polr3k	100	81.481	Pundamilia_nyererei
ENSCSAVG00000008256	-	100	81.481	ENSPNAG00000012135	polr3k	100	81.481	Pygocentrus_nattereri
ENSCSAVG00000008256	-	100	79.630	ENSRNOG00000017843	Polr3k	100	79.630	Rattus_norvegicus
ENSCSAVG00000008256	-	100	79.630	ENSRBIG00000044310	POLR3K	100	79.630	Rhinopithecus_bieti
ENSCSAVG00000008256	-	100	79.630	ENSRROG00000039773	POLR3K	100	79.630	Rhinopithecus_roxellana
ENSCSAVG00000008256	-	100	50.000	YDR045C	RPC11	99	50.000	Saccharomyces_cerevisiae
ENSCSAVG00000008256	-	100	61.111	ENSSBOG00000013108	POLR3K	100	61.111	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008256	-	100	82.407	ENSSFOG00015014586	polr3k	100	82.407	Scleropages_formosus
ENSCSAVG00000008256	-	100	79.630	ENSSMAG00000005016	polr3k	100	79.630	Scophthalmus_maximus
ENSCSAVG00000008256	-	100	81.481	ENSSDUG00000019184	polr3k	100	81.481	Seriola_dumerili
ENSCSAVG00000008256	-	100	80.556	ENSSLDG00000010911	polr3k	100	80.556	Seriola_lalandi_dorsalis
ENSCSAVG00000008256	-	100	77.778	ENSSPUG00000019095	POLR3K	100	77.778	Sphenodon_punctatus
ENSCSAVG00000008256	-	100	82.407	ENSSPAG00000013884	polr3k	100	82.407	Stegastes_partitus
ENSCSAVG00000008256	-	100	79.630	ENSSSCG00000007970	POLR3K	100	79.630	Sus_scrofa
ENSCSAVG00000008256	-	100	80.556	ENSTRUG00000011844	polr3k	100	80.556	Takifugu_rubripes
ENSCSAVG00000008256	-	100	81.481	ENSTNIG00000018584	polr3k	100	81.481	Tetraodon_nigroviridis
ENSCSAVG00000008256	-	100	78.704	ENSTTRG00000012043	POLR3K	100	78.704	Tursiops_truncatus
ENSCSAVG00000008256	-	100	79.630	ENSUAMG00000013850	POLR3K	100	79.630	Ursus_americanus
ENSCSAVG00000008256	-	100	79.630	ENSVPAG00000003438	POLR3K	100	79.630	Vicugna_pacos
ENSCSAVG00000008256	-	100	80.556	ENSXETG00000001142	polr3k	100	80.556	Xenopus_tropicalis
ENSCSAVG00000008256	-	100	82.407	ENSXCOG00000011122	polr3k	100	82.407	Xiphophorus_couchianus
ENSCSAVG00000008256	-	100	82.407	ENSXMAG00000025654	polr3k	100	82.407	Xiphophorus_maculatus