EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000008290 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
4814 bases
Position
chrreftig_41:2255650-2260463
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000014129MMR_HSR1PF01926.232.9e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000014292-780-ENSCSAVP00000014129191 (aa)-H2Z964
Gene Model
Click here to download ENSCSAVG00000008290's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008290's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000008290-8345.912ENSCSAVG00000000059-9045.912
ENSCSAVG00000008290-8337.500ENSCSAVG00000000015-8837.500
ENSCSAVG00000008290-9355.367ENSCSAVG00000000504-9655.367
ENSCSAVG00000008290-8547.853ENSCSAVG00000007620-8947.853
ENSCSAVG00000008290-8349.686ENSCSAVG00000007011-8849.068
ENSCSAVG00000008290-8345.912ENSCSAVG00000007010-8845.912
ENSCSAVG00000008290-8742.857ENSCSAVG00000001959-9242.857
ENSCSAVG00000008290-7236.957ENSCSAVG00000008336-8136.957
ENSCSAVG00000008290-8731.429ENSCSAVG00000010686-7531.429
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000008290-9576.796ENSG00000138175ARL39976.796Homo_sapiens
ENSCSAVG00000008290-9775.135ENSAPOG00000024460arl39776.608Acanthochromis_polyacanthus
ENSCSAVG00000008290-9570.166ENSAPOG00000008070-9970.166Acanthochromis_polyacanthus
ENSCSAVG00000008290-9577.348ENSAMEG00000017816-9877.348Ailuropoda_melanoleuca
ENSCSAVG00000008290-9576.796ENSAMEG00000018754-9976.796Ailuropoda_melanoleuca
ENSCSAVG00000008290-9171.098ENSACIG00000019225-9971.098Amphilophus_citrinellus
ENSCSAVG00000008290-9575.691ENSAOCG00000022197arl39975.691Amphiprion_ocellaris
ENSCSAVG00000008290-9570.166ENSAOCG00000024749-9870.166Amphiprion_ocellaris
ENSCSAVG00000008290-9570.166ENSAPEG00000014648-9970.166Amphiprion_percula
ENSCSAVG00000008290-9575.691ENSAPEG00000023428arl39875.691Amphiprion_percula
ENSCSAVG00000008290-9667.213ENSATEG00000018332-9769.364Anabas_testudineus
ENSCSAVG00000008290-9576.243ENSATEG00000003947arl39976.243Anabas_testudineus
ENSCSAVG00000008290-9577.348ENSAPLG00000016017ARL310077.348Anas_platyrhynchos
ENSCSAVG00000008290-9260.000ENSANAG00000027007ARL39360.000Aotus_nancymaae
ENSCSAVG00000008290-9775.135ENSACLG00000027139arl39976.243Astatotilapia_calliptera
ENSCSAVG00000008290-9570.718ENSACLG00000012519-9970.718Astatotilapia_calliptera
ENSCSAVG00000008290-9577.901ENSAMXG00000043381zgc:1101979879.641Astyanax_mexicanus
ENSCSAVG00000008290-9273.864ENSAMXG00000034370-9773.864Astyanax_mexicanus
ENSCSAVG00000008290-9576.796ENSAMXG00000037720arl39976.796Astyanax_mexicanus
ENSCSAVG00000008290-9577.901ENSBTAG00000004318ARL39177.901Bos_taurus
ENSCSAVG00000008290-9577.348ENSCJAG00000040244ARL39977.348Callithrix_jacchus
ENSCSAVG00000008290-9577.348ENSCAFG00000010243ARL39977.348Canis_familiaris
ENSCSAVG00000008290-9776.216ENSCAFG00020010250ARL39576.216Canis_lupus_dingo
ENSCSAVG00000008290-9577.901ENSCHIG00000012000ARL39977.901Capra_hircus
ENSCSAVG00000008290-9576.796ENSCPOG00000014473ARL39876.796Cavia_porcellus
ENSCSAVG00000008290-9567.956ENSCCAG00000028563ARL39971.823Cebus_capucinus
ENSCSAVG00000008290-9567.956ENSCATG00000019333ARL39970.166Cercocebus_atys
ENSCSAVG00000008290-9278.409ENSCLAG00000001055ARL310078.409Chinchilla_lanigera
ENSCSAVG00000008290-9576.796ENSCSAG00000005408ARL310076.796Chlorocebus_sabaeus
ENSCSAVG00000008290-5483.495ENSCHOG00000011898ARL35783.495Choloepus_hoffmanni
ENSCSAVG00000008290-9577.901ENSCPBG00000002364ARL39977.901Chrysemys_picta_bellii
ENSCSAVG00000008290-9083.041ENSCING00000016182-9983.425Ciona_intestinalis
ENSCSAVG00000008290-9577.348ENSCANG00000042758ARL39977.348Colobus_angolensis_palliatus
ENSCSAVG00000008290-9576.796ENSCGRG00001020323Arl39976.796Cricetulus_griseus_chok1gshd
ENSCSAVG00000008290-9576.796ENSCGRG00000002057Arl39976.796Cricetulus_griseus_crigri
ENSCSAVG00000008290-9576.243ENSCSEG00000013309arl39876.243Cynoglossus_semilaevis
ENSCSAVG00000008290-9569.061ENSCSEG00000018550-9969.061Cynoglossus_semilaevis
ENSCSAVG00000008290-9576.243ENSCVAG00000021960arl39976.243Cyprinodon_variegatus
ENSCSAVG00000008290-9571.271ENSCVAG00000016797-9971.271Cyprinodon_variegatus
ENSCSAVG00000008290-9577.348ENSDARG00000071409arl39977.348Danio_rerio
ENSCSAVG00000008290-9577.348ENSDNOG00000033500ARL38277.348Dasypus_novemcinctus
ENSCSAVG00000008290-9577.348ENSDORG00000012086Arl39977.348Dipodomys_ordii
ENSCSAVG00000008290-5483.495ENSETEG00000002373ARL35783.495Echinops_telfairi
ENSCSAVG00000008290-7980.795ENSEASG00005015209ARL39080.795Equus_asinus_asinus
ENSCSAVG00000008290-7980.795ENSECAG00000000300ARL38980.795Equus_caballus
ENSCSAVG00000008290-8777.246ENSEEUG00000004224ARL310077.246Erinaceus_europaeus
ENSCSAVG00000008290-9577.348ENSELUG00000018031arl39777.348Esox_lucius
ENSCSAVG00000008290-9570.718ENSELUG00000013130-9970.718Esox_lucius
ENSCSAVG00000008290-9577.348ENSFCAG00000001251ARL39977.348Felis_catus
ENSCSAVG00000008290-9578.453ENSFALG00000008720ARL39978.453Ficedula_albicollis
ENSCSAVG00000008290-9577.348ENSFDAG00000006628ARL310077.348Fukomys_damarensis
ENSCSAVG00000008290-9570.718ENSFHEG00000018216-8970.718Fundulus_heteroclitus
ENSCSAVG00000008290-9576.243ENSFHEG00000010692arl39976.243Fundulus_heteroclitus
ENSCSAVG00000008290-9376.836ENSGMOG00000001544arl39776.836Gadus_morhua
ENSCSAVG00000008290-9577.901ENSGALG00000008049ARL39977.901Gallus_gallus
ENSCSAVG00000008290-8663.636ENSGAFG00000010573-8966.061Gambusia_affinis
ENSCSAVG00000008290-9576.243ENSGAFG00000005872arl39976.136Gambusia_affinis
ENSCSAVG00000008290-9365.169ENSGACG00000016756-9865.169Gasterosteus_aculeatus
ENSCSAVG00000008290-9376.836ENSGACG00000003070arl39376.836Gasterosteus_aculeatus
ENSCSAVG00000008290-8379.747ENSGAGG00000024365ARL39379.747Gopherus_agassizii
ENSCSAVG00000008290-9576.796ENSGGOG00000003895ARL39976.796Gorilla_gorilla
ENSCSAVG00000008290-9570.718ENSHBUG00000023185-9970.718Haplochromis_burtoni
ENSCSAVG00000008290-9775.135ENSHBUG00000000803arl39976.243Haplochromis_burtoni
ENSCSAVG00000008290-9577.348ENSHGLG00000003244ARL39977.348Heterocephalus_glaber_female
ENSCSAVG00000008290-9577.348ENSHGLG00100016401ARL310077.348Heterocephalus_glaber_male
ENSCSAVG00000008290-9576.796ENSHCOG00000015600arl39976.796Hippocampus_comes
ENSCSAVG00000008290-9577.348ENSIPUG00000008227arl39977.348Ictalurus_punctatus
ENSCSAVG00000008290-9576.796ENSIPUG00000015451arl39976.796Ictalurus_punctatus
ENSCSAVG00000008290-9577.348ENSSTOG00000014453ARL39977.348Ictidomys_tridecemlineatus
ENSCSAVG00000008290-9576.796ENSJJAG00000001249Arl39976.796Jaculus_jaculus
ENSCSAVG00000008290-9569.061ENSKMAG00000017791-9969.061Kryptolebias_marmoratus
ENSCSAVG00000008290-9576.243ENSKMAG00000009772arl39976.243Kryptolebias_marmoratus
ENSCSAVG00000008290-9569.061ENSLBEG00000017331-9969.540Labrus_bergylta
ENSCSAVG00000008290-9576.243ENSLBEG00000025929arl39976.243Labrus_bergylta
ENSCSAVG00000008290-9577.348ENSLACG00000001595ARL310077.348Latimeria_chalumnae
ENSCSAVG00000008290-9576.243ENSLOCG00000015256-9976.243Lepisosteus_oculatus
ENSCSAVG00000008290-9577.901ENSLOCG00000012693arl39977.901Lepisosteus_oculatus
ENSCSAVG00000008290-9577.348ENSLAFG00000005070ARL39977.348Loxodonta_africana
ENSCSAVG00000008290-9577.901ENSMFAG00000045820ARL39977.901Macaca_fascicularis
ENSCSAVG00000008290-9577.901ENSMMUG00000047000ARL39977.901Macaca_mulatta
ENSCSAVG00000008290-9568.508ENSMNEG00000041783ARL39970.718Macaca_nemestrina
ENSCSAVG00000008290-9570.166ENSMAMG00000012951-9970.166Mastacembelus_armatus
ENSCSAVG00000008290-9576.243ENSMAMG00000002666arl39576.243Mastacembelus_armatus
ENSCSAVG00000008290-9570.718ENSMZEG00005018934-9770.718Maylandia_zebra
ENSCSAVG00000008290-9775.135ENSMZEG00005004024arl39976.243Maylandia_zebra
ENSCSAVG00000008290-9577.901ENSMGAG00000010320ARL310077.901Meleagris_gallopavo
ENSCSAVG00000008290-9577.348ENSMICG00000012249ARL39977.348Microcebus_murinus
ENSCSAVG00000008290-9576.796ENSMOCG00000015961Arl39976.796Microtus_ochrogaster
ENSCSAVG00000008290-9567.403ENSMMOG00000009663-9868.156Mola_mola
ENSCSAVG00000008290-9575.691ENSMMOG00000013128arl39975.691Mola_mola
ENSCSAVG00000008290-9576.243ENSMALG00000005347arl39878.313Monopterus_albus
ENSCSAVG00000008290-9576.796MGP_CAROLIEiJ_G0023039Arl39976.796Mus_caroli
ENSCSAVG00000008290-9576.796ENSMUSG00000025035Arl39976.796Mus_musculus
ENSCSAVG00000008290-9576.243MGP_PahariEiJ_G0014529Arl39976.243Mus_pahari
ENSCSAVG00000008290-9576.796MGP_SPRETEiJ_G0023960Arl39976.796Mus_spretus
ENSCSAVG00000008290-9577.348ENSMPUG00000016864ARL39977.348Mustela_putorius_furo
ENSCSAVG00000008290-9576.243ENSMLUG00000012603ARL39976.243Myotis_lucifugus
ENSCSAVG00000008290-9576.243ENSNGAG00000024014Arl39976.243Nannospalax_galili
ENSCSAVG00000008290-9576.243ENSNBRG00000007962arl39976.243Neolamprologus_brichardi
ENSCSAVG00000008290-9571.271ENSNBRG00000005929-9771.271Neolamprologus_brichardi
ENSCSAVG00000008290-9577.348ENSNLEG00000015183ARL39977.348Nomascus_leucogenys
ENSCSAVG00000008290-9576.796ENSOPRG00000012347ARL39976.796Ochotona_princeps
ENSCSAVG00000008290-9577.348ENSODEG00000008389ARL39977.348Octodon_degus
ENSCSAVG00000008290-9571.271ENSONIG00000000203-9971.271Oreochromis_niloticus
ENSCSAVG00000008290-9576.243ENSONIG00000015815arl39776.243Oreochromis_niloticus
ENSCSAVG00000008290-9577.901ENSOANG00000001653ARL39977.901Ornithorhynchus_anatinus
ENSCSAVG00000008290-9576.796ENSOCUG00000005792ARL39976.796Oryctolagus_cuniculus
ENSCSAVG00000008290-9576.243ENSORLG00000010952arl39976.243Oryzias_latipes
ENSCSAVG00000008290-9569.613ENSORLG00000007235-9669.613Oryzias_latipes
ENSCSAVG00000008290-9576.243ENSORLG00020002949arl39976.243Oryzias_latipes_hni
ENSCSAVG00000008290-9570.166ENSORLG00020019239-9970.166Oryzias_latipes_hni
ENSCSAVG00000008290-9576.243ENSORLG00015002410arl39976.243Oryzias_latipes_hsok
ENSCSAVG00000008290-9570.166ENSORLG00015007242-9970.166Oryzias_latipes_hsok
ENSCSAVG00000008290-9576.243ENSOMEG00000007691arl39778.313Oryzias_melastigma
ENSCSAVG00000008290-9570.718ENSOMEG00000003861-9970.718Oryzias_melastigma
ENSCSAVG00000008290-9577.348ENSOGAG00000003631ARL39977.348Otolemur_garnettii
ENSCSAVG00000008290-9577.901ENSOARG00000001689ARL39977.901Ovis_aries
ENSCSAVG00000008290-9576.796ENSPPAG00000034961ARL39976.796Pan_paniscus
ENSCSAVG00000008290-9577.348ENSPPRG00000007715ARL39977.348Panthera_pardus
ENSCSAVG00000008290-9577.348ENSPTIG00000021020ARL39977.348Panthera_tigris_altaica
ENSCSAVG00000008290-9577.348ENSPANG00000033639ARL39977.348Papio_anubis
ENSCSAVG00000008290-9873.404ENSPKIG00000012886arl39776.647Paramormyrops_kingsleyae
ENSCSAVG00000008290-9576.243ENSPKIG00000017974-9976.243Paramormyrops_kingsleyae
ENSCSAVG00000008290-9577.901ENSPSIG00000003938ARL39977.901Pelodiscus_sinensis
ENSCSAVG00000008290-9567.403ENSPMGG00000008658-9967.403Periophthalmus_magnuspinnatus
ENSCSAVG00000008290-9576.796ENSPMGG00000020994arl39576.796Periophthalmus_magnuspinnatus
ENSCSAVG00000008290-9576.796ENSPEMG00000012608Arl39976.796Peromyscus_maniculatus_bairdii
ENSCSAVG00000008290-9578.453ENSPMAG00000009519-9978.453Petromyzon_marinus
ENSCSAVG00000008290-9577.348ENSPCIG00000028982ARL39977.348Phascolarctos_cinereus
ENSCSAVG00000008290-9571.271ENSPFOG00000019829-9971.271Poecilia_formosa
ENSCSAVG00000008290-9576.243ENSPLAG00000001962arl39976.136Poecilia_latipinna
ENSCSAVG00000008290-9272.000ENSPLAG00000016871-8072.000Poecilia_latipinna
ENSCSAVG00000008290-9576.243ENSPMEG00000008907arl39476.243Poecilia_mexicana
ENSCSAVG00000008290-9571.271ENSPMEG00000017082-9971.271Poecilia_mexicana
ENSCSAVG00000008290-9570.718ENSPREG00000014738-9870.718Poecilia_reticulata
ENSCSAVG00000008290-8778.313ENSPREG00000003821arl37378.313Poecilia_reticulata
ENSCSAVG00000008290-9576.796ENSPPYG00000002608ARL39976.796Pongo_abelii
ENSCSAVG00000008290-9577.348ENSPCAG00000009867ARL39977.348Procavia_capensis
ENSCSAVG00000008290-9576.796ENSPCOG00000024271ARL39976.796Propithecus_coquereli
ENSCSAVG00000008290-9576.796ENSPVAG00000011297ARL39976.796Pteropus_vampyrus
ENSCSAVG00000008290-9570.166ENSPNYG00000009889-9770.166Pundamilia_nyererei
ENSCSAVG00000008290-9576.243ENSPNYG00000003962arl39976.243Pundamilia_nyererei
ENSCSAVG00000008290-9576.796ENSPNAG00000027037arl39976.796Pygocentrus_nattereri
ENSCSAVG00000008290-9572.928ENSPNAG00000004165-9973.563Pygocentrus_nattereri
ENSCSAVG00000008290-9577.348ENSPNAG00000014755zgc:1101979879.042Pygocentrus_nattereri
ENSCSAVG00000008290-9576.796ENSRNOG00000019973Arl39776.796Rattus_norvegicus
ENSCSAVG00000008290-9577.348ENSRBIG00000031934ARL39977.348Rhinopithecus_bieti
ENSCSAVG00000008290-9577.348ENSRROG00000030757ARL39977.348Rhinopithecus_roxellana
ENSCSAVG00000008290-9577.348ENSSBOG00000030806ARL38277.348Saimiri_boliviensis_boliviensis
ENSCSAVG00000008290-9577.348ENSSHAG00000018738ARL39977.348Sarcophilus_harrisii
ENSCSAVG00000008290-9576.243ENSSFOG00015015338-9976.243Scleropages_formosus
ENSCSAVG00000008290-9576.243ENSSMAG00000005803arl39976.243Scophthalmus_maximus
ENSCSAVG00000008290-9576.243ENSSDUG00000013976arl39976.243Seriola_dumerili
ENSCSAVG00000008290-9570.718ENSSDUG00000004762-9970.718Seriola_dumerili
ENSCSAVG00000008290-9576.243ENSSLDG00000017576arl39976.243Seriola_lalandi_dorsalis
ENSCSAVG00000008290-9570.718ENSSLDG00000009955-9970.718Seriola_lalandi_dorsalis
ENSCSAVG00000008290-8779.518ENSSPUG00000011154ARL38479.518Sphenodon_punctatus
ENSCSAVG00000008290-9576.243ENSSPAG00000009787arl39877.844Stegastes_partitus
ENSCSAVG00000008290-9569.061ENSSPAG00000001502-9469.061Stegastes_partitus
ENSCSAVG00000008290-9577.348ENSSSCG00000031782ARL39977.348Sus_scrofa
ENSCSAVG00000008290-9578.453ENSTGUG00000010164ARL310078.453Taeniopygia_guttata
ENSCSAVG00000008290-9564.088ENSTRUG00000018668-9164.088Takifugu_rubripes
ENSCSAVG00000008290-9575.138ENSTRUG00000018107arl39975.138Takifugu_rubripes
ENSCSAVG00000008290-9563.536ENSTNIG00000009030-9963.536Tetraodon_nigroviridis
ENSCSAVG00000008290-9575.691ENSTNIG00000004344arl39975.691Tetraodon_nigroviridis
ENSCSAVG00000008290-9574.033ENSTBEG00000004286ARL310074.033Tupaia_belangeri
ENSCSAVG00000008290-9574.586ENSTTRG00000012610ARL39977.348Tursiops_truncatus
ENSCSAVG00000008290-9576.796ENSUAMG00000026665ARL39976.796Ursus_americanus
ENSCSAVG00000008290-9577.348ENSUMAG00000023500ARL39977.348Ursus_maritimus
ENSCSAVG00000008290-9577.348ENSVPAG00000007391ARL310077.348Vicugna_pacos
ENSCSAVG00000008290-9577.348ENSVVUG00000004222ARL39977.348Vulpes_vulpes
ENSCSAVG00000008290-9577.901ENSXETG00000015225arl39977.901Xenopus_tropicalis
ENSCSAVG00000008290-8774.096ENSXCOG00000002882-9274.096Xiphophorus_couchianus
ENSCSAVG00000008290-9576.243ENSXCOG00000005902arl38576.243Xiphophorus_couchianus
ENSCSAVG00000008290-9552.119ENSXMAG00000022054-9952.119Xiphophorus_maculatus
ENSCSAVG00000008290-9675.410ENSXMAG00000015696arl39775.410Xiphophorus_maculatus

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