EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008336 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6452 bases
Position: chrreftig_2872:2076-8527
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014216	MMR_HSR1	PF01926.23	3.3e-05	1	1
ENSCSAVP00000014215	MMR_HSR1	PF01926.23	3.9e-05	1	1
ENSCSAVP00000014214	MMR_HSR1	PF01926.23	6.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014380	-	1030	-	ENSCSAVP00000014215	186 (aa)	-	H2Z9F0
ENSCSAVT00000014381	-	1016	-	ENSCSAVP00000014216	169 (aa)	-	H2Z9F1
ENSCSAVT00000014379	-	1066	-	ENSCSAVP00000014214	188 (aa)	-	H2Z9E9

Gene Model

Click here to download ENSCSAVG00000008336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008336	-	83	37.762	ENSCSAVG00000001959	-	78	37.762
ENSCSAVG00000008336	-	90	36.601	ENSCSAVG00000007620	-	90	35.329
ENSCSAVG00000008336	-	100	35.829	ENSCSAVG00000007011	-	100	35.829
ENSCSAVG00000008336	-	87	34.000	ENSCSAVG00000000504	-	81	34.000
ENSCSAVG00000008336	-	81	36.957	ENSCSAVG00000008290	-	72	36.957
ENSCSAVG00000008336	-	84	34.014	ENSCSAVG00000000015	-	76	35.374
ENSCSAVG00000008336	-	81	34.783	ENSCSAVG00000000059	-	77	34.783
ENSCSAVG00000008336	-	66	30.172	ENSCSAVG00000009147	-	57	30.252
ENSCSAVG00000008336	-	100	35.882	ENSCSAVG00000007010	-	99	35.135
ENSCSAVG00000008336	-	51	31.250	ENSCSAVG00000003938	-	88	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008336	-	100	87.059	ENSG00000134108	ARL8B	100	86.631	Homo_sapiens
ENSCSAVG00000008336	-	100	87.059	ENSAPOG00000013328	arl8bb	100	86.631	Acanthochromis_polyacanthus
ENSCSAVG00000008336	-	100	85.882	ENSAPOG00000018714	arl8ba	100	85.561	Acanthochromis_polyacanthus
ENSCSAVG00000008336	-	100	85.294	ENSACIG00000008614	arl8ba	100	85.027	Amphilophus_citrinellus
ENSCSAVG00000008336	-	100	87.647	ENSACIG00000009595	arl8bb	100	87.166	Amphilophus_citrinellus
ENSCSAVG00000008336	-	100	87.059	ENSAOCG00000024419	arl8bb	100	86.631	Amphiprion_ocellaris
ENSCSAVG00000008336	-	100	85.882	ENSAOCG00000002781	arl8ba	100	85.561	Amphiprion_ocellaris
ENSCSAVG00000008336	-	100	87.059	ENSAPEG00000022867	arl8bb	100	86.631	Amphiprion_percula
ENSCSAVG00000008336	-	100	85.882	ENSAPEG00000002399	arl8ba	100	85.561	Amphiprion_percula
ENSCSAVG00000008336	-	100	87.059	ENSATEG00000009204	arl8bb	100	86.631	Anabas_testudineus
ENSCSAVG00000008336	-	100	85.882	ENSATEG00000024817	arl8ba	100	85.561	Anabas_testudineus
ENSCSAVG00000008336	-	100	88.235	ENSACAG00000012512	ARL8B	99	87.701	Anolis_carolinensis
ENSCSAVG00000008336	-	100	87.059	ENSANAG00000021118	ARL8B	77	86.400	Aotus_nancymaae
ENSCSAVG00000008336	-	100	84.706	ENSACLG00000013597	arl8ba	100	84.492	Astatotilapia_calliptera
ENSCSAVG00000008336	-	100	87.059	ENSACLG00000021872	arl8bb	100	86.631	Astatotilapia_calliptera
ENSCSAVG00000008336	-	100	85.294	ENSAMXG00000030683	arl8ba	100	84.492	Astyanax_mexicanus
ENSCSAVG00000008336	-	100	85.294	ENSAMXG00000032775	arl8bb	100	85.027	Astyanax_mexicanus
ENSCSAVG00000008336	-	100	87.059	ENSBTAG00000012902	ARL8B	100	86.631	Bos_taurus
ENSCSAVG00000008336	-	100	87.059	ENSCJAG00000046554	ARL8B	100	86.631	Callithrix_jacchus
ENSCSAVG00000008336	-	100	87.059	ENSCAFG00000005617	ARL8B	100	86.631	Canis_familiaris
ENSCSAVG00000008336	-	100	87.059	ENSCAFG00020009368	ARL8B	100	86.631	Canis_lupus_dingo
ENSCSAVG00000008336	-	100	86.471	ENSCPOG00000031098	ARL8B	100	86.096	Cavia_porcellus
ENSCSAVG00000008336	-	100	87.059	ENSCCAG00000028492	ARL8B	100	86.631	Cebus_capucinus
ENSCSAVG00000008336	-	100	87.059	ENSCATG00000039869	ARL8B	100	86.631	Cercocebus_atys
ENSCSAVG00000008336	-	100	87.059	ENSCSAG00000010899	ARL8B	77	87.500	Chlorocebus_sabaeus
ENSCSAVG00000008336	-	100	87.647	ENSCPBG00000014937	ARL8B	100	87.166	Chrysemys_picta_bellii
ENSCSAVG00000008336	-	100	96.471	ENSCING00000024495	-	100	96.257	Ciona_intestinalis
ENSCSAVG00000008336	-	100	87.059	ENSCANG00000032641	ARL8B	100	86.631	Colobus_angolensis_palliatus
ENSCSAVG00000008336	-	100	87.059	ENSCGRG00001018115	Arl8b	100	86.631	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008336	-	100	87.059	ENSCGRG00000016383	Arl8b	100	86.631	Cricetulus_griseus_crigri
ENSCSAVG00000008336	-	100	85.294	ENSCSEG00000021772	arl8ba	100	85.027	Cynoglossus_semilaevis
ENSCSAVG00000008336	-	100	85.294	ENSCSEG00000014248	-	88	85.027	Cynoglossus_semilaevis
ENSCSAVG00000008336	-	100	86.471	ENSCVAG00000020378	arl8ba	100	86.096	Cyprinodon_variegatus
ENSCSAVG00000008336	-	88	89.634	ENSCVAG00000005239	ARL8B	98	89.634	Cyprinodon_variegatus
ENSCSAVG00000008336	-	100	85.882	ENSDARG00000070318	arl8bb	100	85.561	Danio_rerio
ENSCSAVG00000008336	-	100	87.059	ENSDARG00000006915	arl8ba	100	86.631	Danio_rerio
ENSCSAVG00000008336	-	100	87.059	ENSDNOG00000046163	ARL8B	78	86.631	Dasypus_novemcinctus
ENSCSAVG00000008336	-	100	86.471	ENSDORG00000023904	Arl8b	100	86.096	Dipodomys_ordii
ENSCSAVG00000008336	-	100	75.294	ENSETEG00000011407	ARL8B	100	75.882	Echinops_telfairi
ENSCSAVG00000008336	-	100	87.647	ENSEBUG00000009183	arl8ba	98	88.043	Eptatretus_burgeri
ENSCSAVG00000008336	-	100	87.059	ENSEASG00005013084	ARL8B	100	86.631	Equus_asinus_asinus
ENSCSAVG00000008336	-	100	87.059	ENSECAG00000013084	ARL8B	100	86.631	Equus_caballus
ENSCSAVG00000008336	-	100	85.882	ENSEEUG00000000612	ARL8B	100	86.471	Erinaceus_europaeus
ENSCSAVG00000008336	-	100	84.706	ENSELUG00000003984	arl8bb	77	83.422	Esox_lucius
ENSCSAVG00000008336	-	100	86.471	ENSELUG00000009390	arl8ba	100	86.096	Esox_lucius
ENSCSAVG00000008336	-	100	87.059	ENSFCAG00000000736	ARL8B	100	86.631	Felis_catus
ENSCSAVG00000008336	-	100	86.471	ENSFDAG00000001253	ARL8B	100	86.096	Fukomys_damarensis
ENSCSAVG00000008336	-	100	86.471	ENSFHEG00000019579	arl8bb	89	86.096	Fundulus_heteroclitus
ENSCSAVG00000008336	-	100	87.059	ENSFHEG00000020247	arl8ba	100	86.631	Fundulus_heteroclitus
ENSCSAVG00000008336	-	100	86.471	ENSGMOG00000002416	arl8bb	100	86.096	Gadus_morhua
ENSCSAVG00000008336	-	100	88.235	ENSGALG00000008314	ARL8B	100	87.701	Gallus_gallus
ENSCSAVG00000008336	-	100	87.059	ENSGAFG00000008497	arl8bb	100	86.631	Gambusia_affinis
ENSCSAVG00000008336	-	100	87.059	ENSGAFG00000010938	arl8ba	96	85.714	Gambusia_affinis
ENSCSAVG00000008336	-	100	84.118	ENSGACG00000012267	arl8ba	98	84.783	Gasterosteus_aculeatus
ENSCSAVG00000008336	-	100	84.706	ENSGACG00000011972	arl8bb	100	84.492	Gasterosteus_aculeatus
ENSCSAVG00000008336	-	100	87.059	ENSGGOG00000004952	ARL8B	100	86.631	Gorilla_gorilla
ENSCSAVG00000008336	-	100	87.059	ENSHBUG00000014610	arl8bb	100	86.631	Haplochromis_burtoni
ENSCSAVG00000008336	-	100	84.706	ENSHBUG00000002201	arl8ba	100	84.492	Haplochromis_burtoni
ENSCSAVG00000008336	-	100	86.471	ENSHGLG00000001846	ARL8B	100	86.096	Heterocephalus_glaber_female
ENSCSAVG00000008336	-	100	86.471	ENSHGLG00100001048	ARL8B	100	86.096	Heterocephalus_glaber_male
ENSCSAVG00000008336	-	100	84.706	ENSHCOG00000000920	arl8ba	100	84.492	Hippocampus_comes
ENSCSAVG00000008336	-	100	85.294	ENSHCOG00000010468	arl8bb	100	85.027	Hippocampus_comes
ENSCSAVG00000008336	-	100	85.882	ENSIPUG00000021761	arl8bb	100	85.027	Ictalurus_punctatus
ENSCSAVG00000008336	-	100	85.882	ENSIPUG00000000931	arl8ba	100	85.027	Ictalurus_punctatus
ENSCSAVG00000008336	-	100	86.471	ENSSTOG00000009294	ARL8B	100	86.096	Ictidomys_tridecemlineatus
ENSCSAVG00000008336	-	100	86.471	ENSKMAG00000006196	arl8ba	100	86.096	Kryptolebias_marmoratus
ENSCSAVG00000008336	-	100	87.059	ENSKMAG00000020329	arl8bb	100	86.631	Kryptolebias_marmoratus
ENSCSAVG00000008336	-	100	84.706	ENSLBEG00000022310	arl8ba	85	84.492	Labrus_bergylta
ENSCSAVG00000008336	-	100	78.307	ENSLBEG00000019016	arl8bb	100	78.307	Labrus_bergylta
ENSCSAVG00000008336	-	100	87.059	ENSLOCG00000010957	arl8bb	99	86.631	Lepisosteus_oculatus
ENSCSAVG00000008336	-	100	87.059	ENSLAFG00000007764	ARL8B	100	86.631	Loxodonta_africana
ENSCSAVG00000008336	-	100	87.059	ENSMFAG00000035233	ARL8B	100	86.631	Macaca_fascicularis
ENSCSAVG00000008336	-	100	87.059	ENSMMUG00000008810	ARL8B	100	86.631	Macaca_mulatta
ENSCSAVG00000008336	-	100	87.059	ENSMNEG00000029717	ARL8B	100	86.631	Macaca_nemestrina
ENSCSAVG00000008336	-	100	87.059	ENSMLEG00000038749	ARL8B	100	86.631	Mandrillus_leucophaeus
ENSCSAVG00000008336	-	100	86.471	ENSMAMG00000023379	arl8bb	100	86.096	Mastacembelus_armatus
ENSCSAVG00000008336	-	100	85.294	ENSMAMG00000016958	arl8ba	100	85.027	Mastacembelus_armatus
ENSCSAVG00000008336	-	100	87.059	ENSMZEG00005010708	arl8bb	100	86.631	Maylandia_zebra
ENSCSAVG00000008336	-	100	84.706	ENSMZEG00005015103	arl8ba	100	84.492	Maylandia_zebra
ENSCSAVG00000008336	-	100	87.059	ENSMAUG00000016691	Arl8b	100	86.631	Mesocricetus_auratus
ENSCSAVG00000008336	-	100	87.059	ENSMICG00000029477	-	100	86.631	Microcebus_murinus
ENSCSAVG00000008336	-	92	81.410	ENSMICG00000028928	-	99	77.222	Microcebus_murinus
ENSCSAVG00000008336	-	100	87.059	ENSMOCG00000018769	Arl8b	100	86.631	Microtus_ochrogaster
ENSCSAVG00000008336	-	88	89.024	ENSMMOG00000010994	arl8bb	98	89.024	Mola_mola
ENSCSAVG00000008336	-	88	88.415	ENSMMOG00000011045	arl8ba	98	88.415	Mola_mola
ENSCSAVG00000008336	-	100	87.059	ENSMALG00000008164	arl8bb	100	86.631	Monopterus_albus
ENSCSAVG00000008336	-	100	85.882	ENSMALG00000001217	arl8ba	100	85.561	Monopterus_albus
ENSCSAVG00000008336	-	100	87.059	MGP_CAROLIEiJ_G0028705	Arl8b	100	86.631	Mus_caroli
ENSCSAVG00000008336	-	100	87.059	ENSMUSG00000030105	Arl8b	100	86.631	Mus_musculus
ENSCSAVG00000008336	-	100	87.059	MGP_PahariEiJ_G0022456	Arl8b	100	86.631	Mus_pahari
ENSCSAVG00000008336	-	100	87.059	MGP_SPRETEiJ_G0029733	Arl8b	100	86.631	Mus_spretus
ENSCSAVG00000008336	-	100	87.059	ENSNGAG00000012594	Arl8b	100	86.631	Nannospalax_galili
ENSCSAVG00000008336	-	100	87.059	ENSNBRG00000023542	arl8bb	100	86.631	Neolamprologus_brichardi
ENSCSAVG00000008336	-	100	84.706	ENSNBRG00000018737	arl8ba	100	84.492	Neolamprologus_brichardi
ENSCSAVG00000008336	-	100	87.059	ENSNLEG00000034641	ARL8B	100	86.631	Nomascus_leucogenys
ENSCSAVG00000008336	-	100	87.059	ENSOPRG00000003294	ARL8B	100	86.631	Ochotona_princeps
ENSCSAVG00000008336	-	100	87.059	ENSODEG00000009293	ARL8B	100	86.631	Octodon_degus
ENSCSAVG00000008336	-	100	84.706	ENSONIG00000004057	arl8ba	100	84.492	Oreochromis_niloticus
ENSCSAVG00000008336	-	100	87.059	ENSONIG00000020279	arl8bb	100	86.631	Oreochromis_niloticus
ENSCSAVG00000008336	-	100	86.471	ENSORLG00000027941	arl8ba	100	86.096	Oryzias_latipes
ENSCSAVG00000008336	-	100	87.059	ENSORLG00000012782	arl8bb	100	86.096	Oryzias_latipes
ENSCSAVG00000008336	-	100	87.059	ENSORLG00020002055	arl8bb	100	86.096	Oryzias_latipes_hni
ENSCSAVG00000008336	-	100	86.471	ENSORLG00020021398	arl8ba	100	86.096	Oryzias_latipes_hni
ENSCSAVG00000008336	-	100	85.294	ENSORLG00015017615	arl8ba	100	85.027	Oryzias_latipes_hsok
ENSCSAVG00000008336	-	100	87.059	ENSORLG00015018436	arl8bb	100	86.096	Oryzias_latipes_hsok
ENSCSAVG00000008336	-	100	86.471	ENSOMEG00000001959	arl8ba	100	86.096	Oryzias_melastigma
ENSCSAVG00000008336	-	100	87.059	ENSOMEG00000023857	arl8bb	100	86.631	Oryzias_melastigma
ENSCSAVG00000008336	-	100	87.059	ENSOGAG00000026863	ARL8B	74	87.500	Otolemur_garnettii
ENSCSAVG00000008336	-	95	89.266	ENSOARG00000007805	ARL8B	100	89.266	Ovis_aries
ENSCSAVG00000008336	-	100	87.059	ENSPPAG00000043156	ARL8B	100	86.631	Pan_paniscus
ENSCSAVG00000008336	-	100	87.059	ENSPPRG00000022808	ARL8B	100	86.631	Panthera_pardus
ENSCSAVG00000008336	-	100	87.059	ENSPTRG00000014572	ARL8B	100	86.631	Pan_troglodytes
ENSCSAVG00000008336	-	100	87.059	ENSPANG00000009815	ARL8B	100	86.631	Papio_anubis
ENSCSAVG00000008336	-	100	87.059	ENSPKIG00000025083	arl8ba	100	86.631	Paramormyrops_kingsleyae
ENSCSAVG00000008336	-	100	87.647	ENSPKIG00000019809	arl8bb	69	87.166	Paramormyrops_kingsleyae
ENSCSAVG00000008336	-	88	89.024	ENSPMGG00000021129	arl8bb	98	89.024	Periophthalmus_magnuspinnatus
ENSCSAVG00000008336	-	100	85.882	ENSPMGG00000017975	arl8ba	100	85.561	Periophthalmus_magnuspinnatus
ENSCSAVG00000008336	-	100	84.118	ENSPMAG00000007507	arl8ba	98	84.783	Petromyzon_marinus
ENSCSAVG00000008336	-	100	87.647	ENSPCIG00000028258	ARL8B	100	87.166	Phascolarctos_cinereus
ENSCSAVG00000008336	-	100	87.059	ENSPFOG00000003916	arl8bb	100	86.631	Poecilia_formosa
ENSCSAVG00000008336	-	100	87.059	ENSPFOG00000016361	arl8ba	100	86.631	Poecilia_formosa
ENSCSAVG00000008336	-	100	87.059	ENSPLAG00000020975	arl8ba	100	86.631	Poecilia_latipinna
ENSCSAVG00000008336	-	100	87.059	ENSPLAG00000007941	-	100	86.631	Poecilia_latipinna
ENSCSAVG00000008336	-	100	87.059	ENSPMEG00000004015	arl8bb	100	86.631	Poecilia_mexicana
ENSCSAVG00000008336	-	100	87.059	ENSPMEG00000009058	arl8ba	100	86.631	Poecilia_mexicana
ENSCSAVG00000008336	-	100	87.059	ENSPREG00000004191	arl8ba	100	86.096	Poecilia_reticulata
ENSCSAVG00000008336	-	100	87.059	ENSPREG00000021315	arl8bb	100	86.631	Poecilia_reticulata
ENSCSAVG00000008336	-	96	89.385	ENSPPYG00000013694	ARL8B	96	89.385	Pongo_abelii
ENSCSAVG00000008336	-	100	87.059	ENSPCOG00000013027	ARL8B	100	86.631	Propithecus_coquereli
ENSCSAVG00000008336	-	100	87.059	ENSPVAG00000015922	ARL8B	100	86.631	Pteropus_vampyrus
ENSCSAVG00000008336	-	100	84.706	ENSPNYG00000016248	arl8ba	100	84.492	Pundamilia_nyererei
ENSCSAVG00000008336	-	100	87.059	ENSPNYG00000015445	arl8bb	100	86.631	Pundamilia_nyererei
ENSCSAVG00000008336	-	100	85.882	ENSPNAG00000017354	arl8bb	100	85.561	Pygocentrus_nattereri
ENSCSAVG00000008336	-	100	85.882	ENSPNAG00000007931	arl8ba	100	85.027	Pygocentrus_nattereri
ENSCSAVG00000008336	-	100	87.059	ENSRNOG00000055860	Arl8b	100	86.631	Rattus_norvegicus
ENSCSAVG00000008336	-	100	87.059	ENSRBIG00000040961	ARL8B	100	86.631	Rhinopithecus_bieti
ENSCSAVG00000008336	-	100	87.059	ENSRROG00000010772	ARL8B	100	86.631	Rhinopithecus_roxellana
ENSCSAVG00000008336	-	100	87.059	ENSSBOG00000032344	ARL8B	100	86.631	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008336	-	100	87.059	ENSSFOG00015019411	arl8ba	100	86.631	Scleropages_formosus
ENSCSAVG00000008336	-	100	87.059	ENSSFOG00015020131	arl8bb	100	86.631	Scleropages_formosus
ENSCSAVG00000008336	-	100	85.294	ENSSMAG00000016740	arl8ba	100	85.027	Scophthalmus_maximus
ENSCSAVG00000008336	-	100	86.471	ENSSMAG00000015130	arl8bb	100	85.561	Scophthalmus_maximus
ENSCSAVG00000008336	-	100	86.471	ENSSDUG00000012529	arl8bb	100	86.096	Seriola_dumerili
ENSCSAVG00000008336	-	100	86.471	ENSSDUG00000021055	arl8ba	84	86.096	Seriola_dumerili
ENSCSAVG00000008336	-	100	86.471	ENSSLDG00000009588	arl8bb	100	86.096	Seriola_lalandi_dorsalis
ENSCSAVG00000008336	-	100	86.471	ENSSLDG00000001636	-	67	85.143	Seriola_lalandi_dorsalis
ENSCSAVG00000008336	-	100	87.059	ENSSPAG00000020792	arl8bb	98	89.024	Stegastes_partitus
ENSCSAVG00000008336	-	100	85.882	ENSSPAG00000005746	arl8ba	100	85.561	Stegastes_partitus
ENSCSAVG00000008336	-	100	86.471	ENSSSCG00000011535	-	100	86.096	Sus_scrofa
ENSCSAVG00000008336	-	100	87.059	ENSTRUG00000011496	arl8bb	100	86.631	Takifugu_rubripes
ENSCSAVG00000008336	-	100	84.118	ENSTRUG00000023169	arl8ba	100	83.957	Takifugu_rubripes
ENSCSAVG00000008336	-	100	85.294	ENSTNIG00000014751	arl8ba	100	85.027	Tetraodon_nigroviridis
ENSCSAVG00000008336	-	100	86.471	ENSTNIG00000007336	arl8bb	100	86.096	Tetraodon_nigroviridis
ENSCSAVG00000008336	-	100	87.059	ENSUMAG00000019574	ARL8B	100	86.631	Ursus_maritimus
ENSCSAVG00000008336	-	100	87.059	ENSVVUG00000009760	ARL8B	100	86.631	Vulpes_vulpes
ENSCSAVG00000008336	-	100	87.059	ENSXETG00000005212	arl8b	100	86.631	Xenopus_tropicalis
ENSCSAVG00000008336	-	88	89.634	ENSXCOG00000013402	arl8ba	98	89.634	Xiphophorus_couchianus
ENSCSAVG00000008336	-	100	87.059	ENSXCOG00000004543	arl8bb	100	86.631	Xiphophorus_couchianus
ENSCSAVG00000008336	-	100	87.059	ENSXMAG00000008092	arl8bb	100	86.631	Xiphophorus_maculatus
ENSCSAVG00000008336	-	100	87.059	ENSXMAG00000016669	arl8ba	100	86.631	Xiphophorus_maculatus