EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008394 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 12343 bases
Position: chrreftig_49:1391154-1403496
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014335	ARS2	PF04959.13	8.6e-57	1	1
ENSCSAVP00000014334	ARS2	PF04959.13	7.4e-56	1	1
ENSCSAVP00000014337	ARS2	PF04959.13	2.8e-53	1	1
ENSCSAVP00000014336	ARS2	PF04959.13	3e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014499	-	2870	-	ENSCSAVP00000014334	902 (aa)	-	H2Z9R9
ENSCSAVT00000014500	-	2750	-	ENSCSAVP00000014335	862 (aa)	-	H2Z9S0
ENSCSAVT00000014501	-	1815	-	ENSCSAVP00000014336	605 (aa)	-	H2Z9S1
ENSCSAVT00000014502	-	2536	-	ENSCSAVP00000014337	722 (aa)	-	H2Z9S2

Gene Model

Click here to download ENSCSAVG00000008394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008394	-	81	54.039	ENSG00000087087	SRRT	100	47.233	Homo_sapiens
ENSCSAVG00000008394	-	81	55.429	ENSAPOG00000002304	srrt	100	42.031	Acanthochromis_polyacanthus
ENSCSAVG00000008394	-	79	55.172	ENSAMEG00000014506	SRRT	100	39.850	Ailuropoda_melanoleuca
ENSCSAVG00000008394	-	91	47.563	ENSACIG00000015795	srrt	93	50.545	Amphilophus_citrinellus
ENSCSAVG00000008394	-	82	53.868	ENSAOCG00000009189	-	100	39.934	Amphiprion_ocellaris
ENSCSAVG00000008394	-	99	44.042	ENSAOCG00000009693	srrt	100	42.140	Amphiprion_ocellaris
ENSCSAVG00000008394	-	89	55.429	ENSAPEG00000003646	srrt	100	42.249	Amphiprion_percula
ENSCSAVG00000008394	-	82	53.868	ENSAPEG00000020016	-	100	39.934	Amphiprion_percula
ENSCSAVG00000008394	-	57	52.586	ENSATEG00000003652	-	95	45.386	Anabas_testudineus
ENSCSAVG00000008394	-	89	54.857	ENSATEG00000014425	srrt	100	41.871	Anabas_testudineus
ENSCSAVG00000008394	-	89	55.172	ENSACAG00000001014	SRRT	100	40.904	Anolis_carolinensis
ENSCSAVG00000008394	-	79	55.172	ENSANAG00000031718	SRRT	100	40.689	Aotus_nancymaae
ENSCSAVG00000008394	-	81	55.714	ENSACLG00000013156	srrt	96	41.740	Astatotilapia_calliptera
ENSCSAVG00000008394	-	77	52.450	ENSACLG00000009423	-	100	38.706	Astatotilapia_calliptera
ENSCSAVG00000008394	-	81	56.980	ENSAMXG00000016671	srrt	86	43.532	Astyanax_mexicanus
ENSCSAVG00000008394	-	81	54.039	ENSBTAG00000001134	SRRT	100	40.517	Bos_taurus
ENSCSAVG00000008394	-	91	40.309	WBGene00017085	E01A2.2	92	41.611	Caenorhabditis_elegans
ENSCSAVG00000008394	-	81	53.760	ENSCJAG00000014917	SRRT	100	39.914	Callithrix_jacchus
ENSCSAVG00000008394	-	79	55.172	ENSCAFG00000023538	SRRT	100	40.649	Canis_familiaris
ENSCSAVG00000008394	-	79	55.202	ENSCAFG00020013358	SRRT	100	40.499	Canis_lupus_dingo
ENSCSAVG00000008394	-	84	54.039	ENSCHIG00000010495	SRRT	100	40.709	Capra_hircus
ENSCSAVG00000008394	-	81	53.760	ENSTSYG00000036426	SRRT	96	38.679	Carlito_syrichta
ENSCSAVG00000008394	-	85	53.760	ENSCAPG00000013586	SRRT	99	45.489	Cavia_aperea
ENSCSAVG00000008394	-	85	53.760	ENSCPOG00000001739	SRRT	100	40.236	Cavia_porcellus
ENSCSAVG00000008394	-	81	54.039	ENSCCAG00000015877	SRRT	100	40.581	Cebus_capucinus
ENSCSAVG00000008394	-	81	54.318	ENSCATG00000036306	SRRT	100	40.474	Cercocebus_atys
ENSCSAVG00000008394	-	81	54.039	ENSCLAG00000007568	SRRT	99	43.831	Chinchilla_lanigera
ENSCSAVG00000008394	-	81	54.039	ENSCSAG00000017996	SRRT	100	40.366	Chlorocebus_sabaeus
ENSCSAVG00000008394	-	73	47.794	ENSCHOG00000007815	SRRT	67	45.697	Choloepus_hoffmanni
ENSCSAVG00000008394	-	77	44.853	ENSCPBG00000011553	SRRT	84	42.105	Chrysemys_picta_bellii
ENSCSAVG00000008394	-	90	83.947	ENSCING00000003506	-	100	69.767	Ciona_intestinalis
ENSCSAVG00000008394	-	81	54.039	ENSCANG00000034556	SRRT	100	40.543	Colobus_angolensis_palliatus
ENSCSAVG00000008394	-	79	55.172	ENSCGRG00001001594	Srrt	100	40.172	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008394	-	57	55.172	ENSCGRG00000007292	Srrt	99	43.623	Cricetulus_griseus_crigri
ENSCSAVG00000008394	-	82	55.874	ENSCSEG00000017878	srrt	100	40.000	Cynoglossus_semilaevis
ENSCSAVG00000008394	-	85	53.143	ENSCSEG00000005233	-	100	37.652	Cynoglossus_semilaevis
ENSCSAVG00000008394	-	87	55.523	ENSCVAG00000017344	-	94	41.919	Cyprinodon_variegatus
ENSCSAVG00000008394	-	81	57.429	ENSCVAG00000019848	srrt	100	42.984	Cyprinodon_variegatus
ENSCSAVG00000008394	-	81	56.571	ENSDARG00000017762	srrt	100	42.935	Danio_rerio
ENSCSAVG00000008394	-	79	55.172	ENSDNOG00000003851	SRRT	100	40.194	Dasypus_novemcinctus
ENSCSAVG00000008394	-	79	54.416	ENSDORG00000005584	Srrt	99	45.769	Dipodomys_ordii
ENSCSAVG00000008394	-	98	53.226	FBgn0033062	Ars2	99	40.273	Drosophila_melanogaster
ENSCSAVG00000008394	-	67	55.172	ENSETEG00000016175	SRRT	76	47.521	Echinops_telfairi
ENSCSAVG00000008394	-	79	46.521	ENSEBUG00000008517	-	83	48.180	Eptatretus_burgeri
ENSCSAVG00000008394	-	79	55.172	ENSEASG00005016956	SRRT	100	40.194	Equus_asinus_asinus
ENSCSAVG00000008394	-	79	55.172	ENSECAG00000012292	SRRT	100	40.194	Equus_caballus
ENSCSAVG00000008394	-	57	57.635	ENSEEUG00000009117	SRRT	55	53.947	Erinaceus_europaeus
ENSCSAVG00000008394	-	89	56.125	ENSELUG00000006651	srrt	100	40.947	Esox_lucius
ENSCSAVG00000008394	-	84	53.824	ENSELUG00000021216	-	100	40.152	Esox_lucius
ENSCSAVG00000008394	-	79	55.460	ENSFCAG00000006855	SRRT	100	40.497	Felis_catus
ENSCSAVG00000008394	-	81	54.039	ENSFDAG00000021347	SRRT	99	45.205	Fukomys_damarensis
ENSCSAVG00000008394	-	57	46.857	ENSFHEG00000004105	-	94	42.151	Fundulus_heteroclitus
ENSCSAVG00000008394	-	91	48.142	ENSFHEG00000002756	srrt	93	52.970	Fundulus_heteroclitus
ENSCSAVG00000008394	-	76	53.754	ENSGMOG00000018694	-	79	44.615	Gadus_morhua
ENSCSAVG00000008394	-	89	54.755	ENSGMOG00000018619	srrt	100	40.656	Gadus_morhua
ENSCSAVG00000008394	-	82	52.035	ENSGAFG00000020383	-	100	38.976	Gambusia_affinis
ENSCSAVG00000008394	-	81	57.020	ENSGAFG00000005423	srrt	100	42.746	Gambusia_affinis
ENSCSAVG00000008394	-	81	54.958	ENSGACG00000020387	srrt	100	42.140	Gasterosteus_aculeatus
ENSCSAVG00000008394	-	86	52.381	ENSGACG00000001100	-	100	37.820	Gasterosteus_aculeatus
ENSCSAVG00000008394	-	81	54.039	ENSGGOG00000001508	SRRT	99	40.474	Gorilla_gorilla
ENSCSAVG00000008394	-	81	55.714	ENSHBUG00000002942	srrt	96	41.850	Haplochromis_burtoni
ENSCSAVG00000008394	-	81	54.039	ENSHGLG00000008344	Srrt	89	47.368	Heterocephalus_glaber_female
ENSCSAVG00000008394	-	81	54.039	ENSHGLG00100018857	Srrt	99	44.134	Heterocephalus_glaber_male
ENSCSAVG00000008394	-	97	41.433	ENSHCOG00000008904	-	100	41.696	Hippocampus_comes
ENSCSAVG00000008394	-	81	55.014	ENSHCOG00000005403	srrt	100	41.026	Hippocampus_comes
ENSCSAVG00000008394	-	81	57.184	ENSIPUG00000021150	srrt	100	41.009	Ictalurus_punctatus
ENSCSAVG00000008394	-	81	54.039	ENSSTOG00000013776	SRRT	100	40.043	Ictidomys_tridecemlineatus
ENSCSAVG00000008394	-	79	55.172	ENSJJAG00000010446	Srrt	99	44.961	Jaculus_jaculus
ENSCSAVG00000008394	-	86	56.857	ENSKMAG00000013599	srrt	100	42.367	Kryptolebias_marmoratus
ENSCSAVG00000008394	-	77	53.602	ENSKMAG00000008468	-	100	39.286	Kryptolebias_marmoratus
ENSCSAVG00000008394	-	99	41.485	ENSLBEG00000016308	srrt	100	41.512	Labrus_bergylta
ENSCSAVG00000008394	-	67	51.056	ENSLBEG00000028983	-	90	51.546	Labrus_bergylta
ENSCSAVG00000008394	-	65	46.250	ENSLACG00000001089	SRRT	84	41.958	Latimeria_chalumnae
ENSCSAVG00000008394	-	58	62.136	ENSLOCG00000013658	srrt	99	36.930	Lepisosteus_oculatus
ENSCSAVG00000008394	-	79	55.172	ENSLAFG00000007725	SRRT	100	41.056	Loxodonta_africana
ENSCSAVG00000008394	-	81	54.039	ENSMFAG00000033745	SRRT	100	40.216	Macaca_fascicularis
ENSCSAVG00000008394	-	81	54.039	ENSMMUG00000021255	SRRT	100	40.366	Macaca_mulatta
ENSCSAVG00000008394	-	81	54.039	ENSMNEG00000041864	SRRT	100	40.366	Macaca_nemestrina
ENSCSAVG00000008394	-	81	54.039	ENSMLEG00000029479	SRRT	100	40.216	Mandrillus_leucophaeus
ENSCSAVG00000008394	-	82	53.582	ENSMAMG00000010681	-	100	40.237	Mastacembelus_armatus
ENSCSAVG00000008394	-	89	54.571	ENSMAMG00000014311	srrt	100	41.967	Mastacembelus_armatus
ENSCSAVG00000008394	-	81	55.714	ENSMZEG00005016135	srrt	96	41.740	Maylandia_zebra
ENSCSAVG00000008394	-	77	52.450	ENSMZEG00005028002	-	100	38.639	Maylandia_zebra
ENSCSAVG00000008394	-	79	55.172	ENSMAUG00000011386	Srrt	99	45.644	Mesocricetus_auratus
ENSCSAVG00000008394	-	81	54.039	ENSMICG00000009471	SRRT	100	40.086	Microcebus_murinus
ENSCSAVG00000008394	-	81	54.039	ENSMOCG00000001971	Srrt	99	45.577	Microtus_ochrogaster
ENSCSAVG00000008394	-	81	55.747	ENSMMOG00000016399	srrt	100	42.265	Mola_mola
ENSCSAVG00000008394	-	86	53.779	ENSMMOG00000011137	-	88	40.751	Mola_mola
ENSCSAVG00000008394	-	57	53.868	ENSMODG00000004862	SRRT	98	45.315	Monodelphis_domestica
ENSCSAVG00000008394	-	81	54.545	ENSMALG00000018604	srrt	100	38.309	Monopterus_albus
ENSCSAVG00000008394	-	69	41.355	ENSMALG00000005567	-	98	39.698	Monopterus_albus
ENSCSAVG00000008394	-	81	54.039	MGP_CAROLIEiJ_G0027870	Srrt	99	46.346	Mus_caroli
ENSCSAVG00000008394	-	81	54.039	ENSMUSG00000037364	Srrt	99	46.346	Mus_musculus
ENSCSAVG00000008394	-	81	54.039	MGP_PahariEiJ_G0024456	Srrt	99	46.154	Mus_pahari
ENSCSAVG00000008394	-	81	54.039	MGP_SPRETEiJ_G0028875	Srrt	99	46.346	Mus_spretus
ENSCSAVG00000008394	-	79	55.172	ENSMPUG00000015839	SRRT	100	40.669	Mustela_putorius_furo
ENSCSAVG00000008394	-	81	54.039	ENSMLUG00000009975	SRRT	100	40.602	Myotis_lucifugus
ENSCSAVG00000008394	-	85	54.039	ENSNGAG00000023715	Srrt	100	42.105	Nannospalax_galili
ENSCSAVG00000008394	-	81	55.556	ENSNBRG00000019100	srrt	100	41.556	Neolamprologus_brichardi
ENSCSAVG00000008394	-	79	48.974	ENSNLEG00000011987	SRRT	98	37.648	Nomascus_leucogenys
ENSCSAVG00000008394	-	80	48.127	ENSMEUG00000011941	SRRT	100	36.150	Notamacropus_eugenii
ENSCSAVG00000008394	-	59	58.000	ENSOPRG00000002502	-	53	57.807	Ochotona_princeps
ENSCSAVG00000008394	-	81	54.039	ENSODEG00000016856	SRRT	99	45.349	Octodon_degus
ENSCSAVG00000008394	-	81	55.714	ENSONIG00000004242	srrt	100	40.276	Oreochromis_niloticus
ENSCSAVG00000008394	-	77	53.026	ENSONIG00000016080	-	100	38.585	Oreochromis_niloticus
ENSCSAVG00000008394	-	81	56.000	ENSORLG00000008120	srrt	100	42.556	Oryzias_latipes
ENSCSAVG00000008394	-	81	55.714	ENSORLG00020003058	srrt	100	42.556	Oryzias_latipes_hni
ENSCSAVG00000008394	-	81	55.714	ENSORLG00015008062	srrt	100	42.444	Oryzias_latipes_hsok
ENSCSAVG00000008394	-	78	54.942	ENSOMEG00000006963	-	100	39.313	Oryzias_melastigma
ENSCSAVG00000008394	-	91	47.148	ENSOMEG00000003155	srrt	95	48.703	Oryzias_melastigma
ENSCSAVG00000008394	-	81	54.039	ENSOGAG00000017242	SRRT	100	40.194	Otolemur_garnettii
ENSCSAVG00000008394	-	81	54.039	ENSOARG00000015645	SRRT	100	40.561	Ovis_aries
ENSCSAVG00000008394	-	89	54.039	ENSPPAG00000041090	SRRT	100	40.432	Pan_paniscus
ENSCSAVG00000008394	-	79	55.460	ENSPPRG00000009557	SRRT	100	40.652	Panthera_pardus
ENSCSAVG00000008394	-	79	55.460	ENSPTIG00000014355	SRRT	100	40.497	Panthera_tigris_altaica
ENSCSAVG00000008394	-	89	54.039	ENSPTRG00000019511	SRRT	100	40.432	Pan_troglodytes
ENSCSAVG00000008394	-	81	54.039	ENSPANG00000020763	SRRT	78	48.958	Papio_anubis
ENSCSAVG00000008394	-	92	55.460	ENSPKIG00000022212	-	100	41.960	Paramormyrops_kingsleyae
ENSCSAVG00000008394	-	89	58.621	ENSPKIG00000005434	srrt	100	43.417	Paramormyrops_kingsleyae
ENSCSAVG00000008394	-	89	55.172	ENSPSIG00000016311	SRRT	100	41.222	Pelodiscus_sinensis
ENSCSAVG00000008394	-	97	44.769	ENSPMGG00000002841	srrt	93	49.784	Periophthalmus_magnuspinnatus
ENSCSAVG00000008394	-	81	54.039	ENSPEMG00000010834	Srrt	99	45.349	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008394	-	80	51.676	ENSPMAG00000009614	-	100	38.720	Petromyzon_marinus
ENSCSAVG00000008394	-	83	54.598	ENSPCIG00000000816	SRRT	100	39.957	Phascolarctos_cinereus
ENSCSAVG00000008394	-	81	56.734	ENSPFOG00000005704	srrt	100	42.699	Poecilia_formosa
ENSCSAVG00000008394	-	82	52.326	ENSPFOG00000016554	-	100	38.717	Poecilia_formosa
ENSCSAVG00000008394	-	81	56.734	ENSPLAG00000021992	srrt	100	43.045	Poecilia_latipinna
ENSCSAVG00000008394	-	77	52.326	ENSPLAG00000004526	-	99	41.681	Poecilia_latipinna
ENSCSAVG00000008394	-	86	56.734	ENSPMEG00000001182	srrt	100	42.936	Poecilia_mexicana
ENSCSAVG00000008394	-	82	52.326	ENSPMEG00000001520	-	89	40.127	Poecilia_mexicana
ENSCSAVG00000008394	-	81	56.160	ENSPREG00000022308	srrt	100	42.395	Poecilia_reticulata
ENSCSAVG00000008394	-	75	55.263	ENSPPYG00000017432	SRRT	100	34.375	Pongo_abelii
ENSCSAVG00000008394	-	83	53.541	ENSPCAG00000001621	SRRT	100	39.552	Procavia_capensis
ENSCSAVG00000008394	-	81	54.039	ENSPCOG00000025751	SRRT	100	40.086	Propithecus_coquereli
ENSCSAVG00000008394	-	69	47.414	ENSPVAG00000000834	SRRT	100	37.902	Pteropus_vampyrus
ENSCSAVG00000008394	-	81	55.714	ENSPNYG00000018710	srrt	100	41.850	Pundamilia_nyererei
ENSCSAVG00000008394	-	71	50.323	ENSPNAG00000010629	srrt	88	35.104	Pygocentrus_nattereri
ENSCSAVG00000008394	-	57	45.143	ENSRNOG00000048277	AABR07035787.1	99	41.968	Rattus_norvegicus
ENSCSAVG00000008394	-	81	54.039	ENSRBIG00000035718	SRRT	100	40.366	Rhinopithecus_bieti
ENSCSAVG00000008394	-	81	54.039	ENSRROG00000030622	SRRT	100	40.366	Rhinopithecus_roxellana
ENSCSAVG00000008394	-	81	54.039	ENSSBOG00000033570	SRRT	100	40.581	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008394	-	57	54.286	ENSSHAG00000007349	-	99	40.209	Sarcophilus_harrisii
ENSCSAVG00000008394	-	81	57.225	ENSSFOG00015017293	srrt	100	42.716	Scleropages_formosus
ENSCSAVG00000008394	-	81	55.556	ENSSMAG00000015342	srrt	93	50.547	Scophthalmus_maximus
ENSCSAVG00000008394	-	75	51.163	ENSSMAG00000018195	-	100	38.196	Scophthalmus_maximus
ENSCSAVG00000008394	-	57	44.857	ENSSDUG00000002051	-	100	40.202	Seriola_dumerili
ENSCSAVG00000008394	-	81	55.429	ENSSDUG00000012049	srrt	99	46.314	Seriola_dumerili
ENSCSAVG00000008394	-	91	44.179	ENSSLDG00000017477	srrt	100	42.411	Seriola_lalandi_dorsalis
ENSCSAVG00000008394	-	77	52.874	ENSSPAG00000018943	-	99	41.837	Stegastes_partitus
ENSCSAVG00000008394	-	81	55.143	ENSSPAG00000005665	srrt	98	42.208	Stegastes_partitus
ENSCSAVG00000008394	-	76	55.183	ENSSSCG00000024789	SRRT	98	38.889	Sus_scrofa
ENSCSAVG00000008394	-	86	54.070	ENSTRUG00000000023	-	76	54.366	Takifugu_rubripes
ENSCSAVG00000008394	-	81	55.014	ENSTRUG00000016075	srrt	100	41.023	Takifugu_rubripes
ENSCSAVG00000008394	-	51	53.247	ENSTNIG00000019765	-	97	53.994	Tetraodon_nigroviridis
ENSCSAVG00000008394	-	85	54.310	ENSTNIG00000003111	-	100	39.064	Tetraodon_nigroviridis
ENSCSAVG00000008394	-	57	54.958	ENSTNIG00000011779	srrt	99	42.152	Tetraodon_nigroviridis
ENSCSAVG00000008394	-	81	54.318	ENSTTRG00000011104	SRRT	100	40.649	Tursiops_truncatus
ENSCSAVG00000008394	-	79	55.172	ENSUAMG00000027997	SRRT	96	40.541	Ursus_americanus
ENSCSAVG00000008394	-	79	55.172	ENSUMAG00000011295	SRRT	100	40.497	Ursus_maritimus
ENSCSAVG00000008394	-	79	55.172	ENSVVUG00000023572	SRRT	100	40.649	Vulpes_vulpes
ENSCSAVG00000008394	-	76	54.734	ENSXETG00000025124	srrt	83	45.420	Xenopus_tropicalis
ENSCSAVG00000008394	-	51	41.463	ENSXCOG00000013105	-	92	41.256	Xiphophorus_couchianus
ENSCSAVG00000008394	-	81	56.447	ENSXMAG00000007627	srrt	100	46.593	Xiphophorus_maculatus
ENSCSAVG00000008394	-	87	52.035	ENSXMAG00000002090	-	100	38.895	Xiphophorus_maculatus