EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008477 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 11646 bases
Position: chrreftig_48:579870-591515
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014480	eIF2A	PF08662.11	9.3e-09	1	1
ENSCSAVP00000014481	eIF2A	PF08662.11	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014646	-	1785	-	ENSCSAVP00000014481	376 (aa)	-	H2ZA66
ENSCSAVT00000014645	-	1636	-	ENSCSAVP00000014480	326 (aa)	-	H2ZA65

Gene Model

Click here to download ENSCSAVG00000008477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008477's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008477	-	94	35.025	ENSCSAVG00000003310	-	97	35.025
ENSCSAVG00000008477	-	84	32.000	ENSCSAVG00000003355	-	81	32.000
ENSCSAVG00000008477	-	82	30.000	ENSCSAVG00000011041	-	94	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008477	-	99	67.069	ENSG00000164087	POC1A	99	65.217	Homo_sapiens
ENSCSAVG00000008477	-	98	63.784	ENSAPOG00000002677	POC1A	95	63.784	Acanthochromis_polyacanthus
ENSCSAVG00000008477	-	99	63.852	ENSAMEG00000009136	POC1A	95	63.852	Ailuropoda_melanoleuca
ENSCSAVG00000008477	-	87	72.438	ENSACIG00000018288	poc1a	95	58.231	Amphilophus_citrinellus
ENSCSAVG00000008477	-	98	64.286	ENSAOCG00000001066	POC1A	98	64.286	Amphiprion_ocellaris
ENSCSAVG00000008477	-	98	68.750	ENSAPEG00000005795	poc1a	97	72.598	Amphiprion_percula
ENSCSAVG00000008477	-	99	66.667	ENSAPLG00000007756	POC1A	97	66.667	Anas_platyrhynchos
ENSCSAVG00000008477	-	96	66.565	ENSANAG00000030897	POC1A	96	66.565	Aotus_nancymaae
ENSCSAVG00000008477	-	98	64.638	ENSACLG00000017869	POC1A	94	64.638	Astatotilapia_calliptera
ENSCSAVG00000008477	-	99	66.873	ENSAMXG00000024703	poc1a	93	66.873	Astyanax_mexicanus
ENSCSAVG00000008477	-	99	64.785	ENSBTAG00000001471	POC1A	99	64.674	Bos_taurus
ENSCSAVG00000008477	-	96	67.702	ENSCJAG00000005972	POC1A	95	67.702	Callithrix_jacchus
ENSCSAVG00000008477	-	99	59.474	ENSCAFG00020022379	POC1A	96	59.474	Canis_lupus_dingo
ENSCSAVG00000008477	-	99	64.042	ENSCHIG00000002571	POC1A	96	64.042	Capra_hircus
ENSCSAVG00000008477	-	99	67.069	ENSTSYG00000008302	POC1A	95	67.069	Carlito_syrichta
ENSCSAVG00000008477	-	91	59.302	ENSCAPG00000016201	POC1A	87	59.302	Cavia_aperea
ENSCSAVG00000008477	-	99	66.767	ENSCPOG00000006740	POC1A	96	66.767	Cavia_porcellus
ENSCSAVG00000008477	-	96	66.869	ENSCCAG00000023380	POC1A	96	66.869	Cebus_capucinus
ENSCSAVG00000008477	-	99	63.325	ENSCATG00000021822	POC1A	96	63.325	Cercocebus_atys
ENSCSAVG00000008477	-	99	61.934	ENSCLAG00000010593	POC1A	95	61.934	Chinchilla_lanigera
ENSCSAVG00000008477	-	97	64.481	ENSCSAG00000013862	POC1A	99	64.481	Chlorocebus_sabaeus
ENSCSAVG00000008477	-	83	75.185	ENSCPBG00000016728	POC1A	98	75.185	Chrysemys_picta_bellii
ENSCSAVG00000008477	-	99	67.674	ENSCANG00000033064	POC1A	99	64.754	Colobus_angolensis_palliatus
ENSCSAVG00000008477	-	99	68.389	ENSCGRG00001007357	Poc1a	96	68.389	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008477	-	98	61.892	ENSCSEG00000010287	POC1A	91	61.892	Cynoglossus_semilaevis
ENSCSAVG00000008477	-	98	70.968	ENSCVAG00000015594	POC1A	95	70.968	Cyprinodon_variegatus
ENSCSAVG00000008477	-	71	58.503	ENSEBUG00000008246	POC1A	55	58.503	Eptatretus_burgeri
ENSCSAVG00000008477	-	85	66.547	ENSEBUG00000002614	POC1A	58	66.547	Eptatretus_burgeri
ENSCSAVG00000008477	-	86	59.559	ENSEBUG00000008013	poc1a	81	59.559	Eptatretus_burgeri
ENSCSAVG00000008477	-	86	74.021	ENSELUG00000015504	poc1a	95	62.269	Esox_lucius
ENSCSAVG00000008477	-	99	67.674	ENSFCAG00000015704	POC1A	95	67.674	Felis_catus
ENSCSAVG00000008477	-	98	66.393	ENSFALG00000008922	POC1A	95	66.393	Ficedula_albicollis
ENSCSAVG00000008477	-	99	67.069	ENSFDAG00000011606	POC1A	96	67.069	Fukomys_damarensis
ENSCSAVG00000008477	-	97	62.391	ENSFHEG00000015504	POC1A	93	62.391	Fundulus_heteroclitus
ENSCSAVG00000008477	-	98	69.605	ENSGALG00000034572	-	95	69.605	Gallus_gallus
ENSCSAVG00000008477	-	90	72.598	ENSGACG00000007015	poc1a	94	64.042	Gasterosteus_aculeatus
ENSCSAVG00000008477	-	99	65.879	ENSGAGG00000014637	POC1A	95	65.879	Gopherus_agassizii
ENSCSAVG00000008477	-	99	67.069	ENSGGOG00000006652	POC1A	95	67.069	Gorilla_gorilla
ENSCSAVG00000008477	-	99	66.767	ENSHGLG00000013436	POC1A	96	66.767	Heterocephalus_glaber_female
ENSCSAVG00000008477	-	99	63.613	ENSHGLG00100003479	POC1A	97	63.613	Heterocephalus_glaber_male
ENSCSAVG00000008477	-	98	60.053	ENSIPUG00000001227	POC1A	94	69.424	Ictalurus_punctatus
ENSCSAVG00000008477	-	99	66.163	ENSSTOG00000002638	POC1A	96	66.163	Ictidomys_tridecemlineatus
ENSCSAVG00000008477	-	99	67.372	ENSJJAG00000018739	Poc1a	96	67.372	Jaculus_jaculus
ENSCSAVG00000008477	-	97	65.432	ENSLBEG00000016119	POC1A	96	52.968	Labrus_bergylta
ENSCSAVG00000008477	-	98	63.391	ENSLACG00000018788	POC1A	85	74.296	Latimeria_chalumnae
ENSCSAVG00000008477	-	95	71.474	ENSLOCG00000013801	poc1a	95	71.474	Lepisosteus_oculatus
ENSCSAVG00000008477	-	99	59.580	ENSLAFG00000028434	POC1A	93	66.192	Loxodonta_africana
ENSCSAVG00000008477	-	99	64.208	ENSMFAG00000001970	POC1A	99	64.208	Macaca_fascicularis
ENSCSAVG00000008477	-	99	63.325	ENSMMUG00000012485	POC1A	96	63.325	Macaca_mulatta
ENSCSAVG00000008477	-	96	64.208	ENSMNEG00000042811	POC1A	99	64.208	Macaca_nemestrina
ENSCSAVG00000008477	-	99	67.069	ENSMLEG00000039574	POC1A	99	64.208	Mandrillus_leucophaeus
ENSCSAVG00000008477	-	83	74.349	ENSMAMG00000014233	POC1A	97	53.864	Mastacembelus_armatus
ENSCSAVG00000008477	-	86	71.886	ENSMZEG00005013503	POC1A	62	71.886	Maylandia_zebra
ENSCSAVG00000008477	-	92	70.492	ENSMGAG00000001628	POC1A	96	57.957	Meleagris_gallopavo
ENSCSAVG00000008477	-	99	67.477	ENSMAUG00000017403	Poc1a	96	67.477	Mesocricetus_auratus
ENSCSAVG00000008477	-	99	67.576	ENSMICG00000002709	POC1A	95	67.576	Microcebus_murinus
ENSCSAVG00000008477	-	97	64.798	ENSMOCG00000003396	Poc1a	96	64.286	Microtus_ochrogaster
ENSCSAVG00000008477	-	98	60.647	ENSMMOG00000010427	poc1a	91	60.647	Mola_mola
ENSCSAVG00000008477	-	93	67.961	ENSMODG00000011717	POC1A	94	62.994	Monodelphis_domestica
ENSCSAVG00000008477	-	98	66.970	ENSMALG00000009054	poc1a	91	66.970	Monopterus_albus
ENSCSAVG00000008477	-	99	66.869	MGP_CAROLIEiJ_G0032617	Poc1a	96	66.869	Mus_caroli
ENSCSAVG00000008477	-	99	66.565	ENSMUSG00000023345	Poc1a	99	64.688	Mus_musculus
ENSCSAVG00000008477	-	99	67.173	MGP_PahariEiJ_G0015485	Poc1a	96	67.173	Mus_pahari
ENSCSAVG00000008477	-	99	66.565	MGP_SPRETEiJ_G0033763	Poc1a	97	66.565	Mus_spretus
ENSCSAVG00000008477	-	99	63.255	ENSMPUG00000011723	POC1A	96	63.255	Mustela_putorius_furo
ENSCSAVG00000008477	-	99	64.550	ENSMLUG00000015092	POC1A	88	64.550	Myotis_lucifugus
ENSCSAVG00000008477	-	99	64.021	ENSNGAG00000005212	Poc1a	96	64.021	Nannospalax_galili
ENSCSAVG00000008477	-	87	71.378	ENSNBRG00000022135	poc1a	95	58.942	Neolamprologus_brichardi
ENSCSAVG00000008477	-	99	67.069	ENSNLEG00000007084	POC1A	99	64.946	Nomascus_leucogenys
ENSCSAVG00000008477	-	83	62.082	ENSMEUG00000007715	-	69	62.082	Notamacropus_eugenii
ENSCSAVG00000008477	-	97	62.169	ENSOPRG00000008831	POC1A	91	62.169	Ochotona_princeps
ENSCSAVG00000008477	-	99	63.969	ENSODEG00000018290	POC1A	97	63.969	Octodon_degus
ENSCSAVG00000008477	-	85	70.863	ENSONIG00000014378	POC1A	61	70.863	Oreochromis_niloticus
ENSCSAVG00000008477	-	97	64.674	ENSOCUG00000002080	POC1A	99	64.674	Oryctolagus_cuniculus
ENSCSAVG00000008477	-	98	64.438	ENSOMEG00000019834	POC1A	94	52.995	Oryzias_melastigma
ENSCSAVG00000008477	-	97	65.217	ENSOGAG00000032245	POC1A	88	65.812	Otolemur_garnettii
ENSCSAVG00000008477	-	99	63.780	ENSOARG00000006352	POC1A	96	63.780	Ovis_aries
ENSCSAVG00000008477	-	99	67.069	ENSPPAG00000043583	POC1A	99	65.301	Pan_paniscus
ENSCSAVG00000008477	-	99	67.674	ENSPPRG00000003365	POC1A	95	67.674	Panthera_pardus
ENSCSAVG00000008477	-	96	65.301	ENSPTIG00000005388	POC1A	99	65.301	Panthera_tigris_altaica
ENSCSAVG00000008477	-	99	67.069	ENSPTRG00000014989	POC1A	99	65.217	Pan_troglodytes
ENSCSAVG00000008477	-	90	71.906	ENSPSIG00000014809	POC1A	89	71.761	Pelodiscus_sinensis
ENSCSAVG00000008477	-	98	64.324	ENSPMGG00000005356	poc1a	91	64.324	Periophthalmus_magnuspinnatus
ENSCSAVG00000008477	-	97	64.174	ENSPEMG00000024131	Poc1a	93	69.310	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008477	-	87	75.000	ENSPMAG00000000333	poc1a	73	66.866	Petromyzon_marinus
ENSCSAVG00000008477	-	100	62.205	ENSPCIG00000018160	POC1A	97	62.205	Phascolarctos_cinereus
ENSCSAVG00000008477	-	99	64.042	ENSPPYG00000013816	POC1A	96	64.042	Pongo_abelii
ENSCSAVG00000008477	-	99	64.042	ENSPCAG00000002118	POC1A	97	64.042	Procavia_capensis
ENSCSAVG00000008477	-	99	66.970	ENSPCOG00000012625	POC1A	99	65.940	Propithecus_coquereli
ENSCSAVG00000008477	-	91	60.135	ENSPVAG00000012480	POC1A	93	51.451	Pteropus_vampyrus
ENSCSAVG00000008477	-	98	63.684	ENSPNYG00000019517	poc1a	94	63.684	Pundamilia_nyererei
ENSCSAVG00000008477	-	86	76.157	ENSPNAG00000007556	POC1A	94	62.408	Pygocentrus_nattereri
ENSCSAVG00000008477	-	97	61.918	ENSRNOG00000037295	Poc1a	99	61.918	Rattus_norvegicus
ENSCSAVG00000008477	-	99	67.674	ENSRBIG00000031748	POC1A	99	64.754	Rhinopithecus_bieti
ENSCSAVG00000008477	-	99	67.372	ENSRROG00000044472	POC1A	99	64.481	Rhinopithecus_roxellana
ENSCSAVG00000008477	-	96	66.869	ENSSBOG00000027902	POC1A	99	65.027	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008477	-	98	60.836	ENSSMAG00000013505	POC1A	93	60.836	Scophthalmus_maximus
ENSCSAVG00000008477	-	85	73.022	ENSSDUG00000016161	POC1A	95	53.226	Seriola_dumerili
ENSCSAVG00000008477	-	98	66.250	ENSSLDG00000003828	POC1A	92	72.325	Seriola_lalandi_dorsalis
ENSCSAVG00000008477	-	85	77.612	ENSSPUG00000008656	POC1A	99	57.110	Sphenodon_punctatus
ENSCSAVG00000008477	-	98	50.785	ENSSPAG00000020330	POC1A	88	50.785	Stegastes_partitus
ENSCSAVG00000008477	-	99	63.061	ENSSSCG00000011426	POC1A	96	63.061	Sus_scrofa
ENSCSAVG00000008477	-	98	66.027	ENSTGUG00000006036	POC1A	97	66.027	Taeniopygia_guttata
ENSCSAVG00000008477	-	89	67.883	ENSTRUG00000007900	POC1A	94	59.281	Takifugu_rubripes
ENSCSAVG00000008477	-	90	66.212	ENSTNIG00000014818	POC1A	94	66.212	Tetraodon_nigroviridis
ENSCSAVG00000008477	-	99	61.155	ENSTTRG00000016798	POC1A	96	61.155	Tursiops_truncatus
ENSCSAVG00000008477	-	99	62.992	ENSUAMG00000020816	POC1A	99	68.456	Ursus_americanus
ENSCSAVG00000008477	-	97	63.859	ENSUMAG00000021482	POC1A	99	63.859	Ursus_maritimus
ENSCSAVG00000008477	-	91	72.662	ENSXETG00000010813	poc1a	95	59.259	Xenopus_tropicalis