EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008493 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1425 bases
Position: chrreftig_2:2162613-2164037
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014510	tRNA-synt_1d	PF00750.19	9.9e-76	1	1
ENSCSAVP00000014510	DALR_1	PF05746.15	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014675	-	1425	-	ENSCSAVP00000014510	475 (aa)	-	H2ZA95

Gene Model

Click here to download ENSCSAVG00000008493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008493	-	99	41.632	ENSG00000146282	RARS2	79	41.632	Homo_sapiens
ENSCSAVG00000008493	-	99	40.795	ENSAPOG00000009040	rars2	80	40.795	Acanthochromis_polyacanthus
ENSCSAVG00000008493	-	99	41.139	ENSAMEG00000004455	RARS2	79	41.139	Ailuropoda_melanoleuca
ENSCSAVG00000008493	-	97	39.348	ENSACIG00000009620	rars2	81	36.585	Amphilophus_citrinellus
ENSCSAVG00000008493	-	99	40.795	ENSAOCG00000004368	rars2	80	40.795	Amphiprion_ocellaris
ENSCSAVG00000008493	-	99	40.586	ENSAPEG00000008839	rars2	80	40.586	Amphiprion_percula
ENSCSAVG00000008493	-	99	39.749	ENSATEG00000018075	rars2	80	39.749	Anabas_testudineus
ENSCSAVG00000008493	-	81	36.528	ENSAPLG00000009188	RARS2	99	36.528	Anas_platyrhynchos
ENSCSAVG00000008493	-	99	41.561	ENSACAG00000014970	RARS2	79	41.561	Anolis_carolinensis
ENSCSAVG00000008493	-	99	41.509	ENSANAG00000027711	RARS2	80	41.509	Aotus_nancymaae
ENSCSAVG00000008493	-	97	41.756	ENSACLG00000025254	rars2	78	41.756	Astatotilapia_calliptera
ENSCSAVG00000008493	-	99	39.706	ENSAMXG00000013899	rars2	80	39.706	Astyanax_mexicanus
ENSCSAVG00000008493	-	99	42.050	ENSBTAG00000016967	RARS2	79	41.841	Bos_taurus
ENSCSAVG00000008493	-	99	41.632	ENSCJAG00000000692	RARS2	81	41.632	Callithrix_jacchus
ENSCSAVG00000008493	-	99	42.050	ENSCAFG00000003072	RARS2	79	42.050	Canis_familiaris
ENSCSAVG00000008493	-	80	30.513	ENSCAFG00000017058	RARS	58	30.513	Canis_familiaris
ENSCSAVG00000008493	-	99	42.050	ENSCAFG00020015902	RARS2	79	42.050	Canis_lupus_dingo
ENSCSAVG00000008493	-	99	42.050	ENSCHIG00000011962	RARS2	80	42.050	Capra_hircus
ENSCSAVG00000008493	-	99	41.004	ENSTSYG00000006847	RARS2	79	41.004	Carlito_syrichta
ENSCSAVG00000008493	-	98	32.334	ENSCAPG00000006263	RARS2	81	32.334	Cavia_aperea
ENSCSAVG00000008493	-	98	41.401	ENSCPOG00000025172	RARS2	78	41.401	Cavia_porcellus
ENSCSAVG00000008493	-	99	41.213	ENSCCAG00000031089	RARS2	79	41.213	Cebus_capucinus
ENSCSAVG00000008493	-	99	42.050	ENSCATG00000023833	RARS2	81	42.050	Cercocebus_atys
ENSCSAVG00000008493	-	99	41.213	ENSCLAG00000015838	RARS2	80	41.213	Chinchilla_lanigera
ENSCSAVG00000008493	-	99	42.050	ENSCSAG00000017345	RARS2	79	42.050	Chlorocebus_sabaeus
ENSCSAVG00000008493	-	92	37.444	ENSCHOG00000003468	RARS2	74	37.444	Choloepus_hoffmanni
ENSCSAVG00000008493	-	99	41.314	ENSCPBG00000019897	RARS2	79	41.314	Chrysemys_picta_bellii
ENSCSAVG00000008493	-	99	39.121	ENSCANG00000034918	RARS2	79	39.121	Colobus_angolensis_palliatus
ENSCSAVG00000008493	-	99	40.295	ENSCGRG00001021675	Rars2	79	40.295	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008493	-	99	40.295	ENSCGRG00000007968	Rars2	81	40.295	Cricetulus_griseus_crigri
ENSCSAVG00000008493	-	99	39.662	ENSCSEG00000004086	rars2	79	39.662	Cynoglossus_semilaevis
ENSCSAVG00000008493	-	87	35.731	ENSCVAG00000000789	rars2	99	35.731	Cyprinodon_variegatus
ENSCSAVG00000008493	-	99	37.475	ENSDARG00000032277	rars2	80	37.475	Danio_rerio
ENSCSAVG00000008493	-	55	33.333	ENSDNOG00000015032	RARS	56	33.333	Dasypus_novemcinctus
ENSCSAVG00000008493	-	99	42.259	ENSDNOG00000000543	RARS2	73	44.510	Dasypus_novemcinctus
ENSCSAVG00000008493	-	98	41.401	ENSDORG00000013440	Rars2	78	41.401	Dipodomys_ordii
ENSCSAVG00000008493	-	98	33.970	FBgn0037526	ArgRS-m	77	33.970	Drosophila_melanogaster
ENSCSAVG00000008493	-	99	37.500	ENSETEG00000012660	RARS2	83	37.500	Echinops_telfairi
ENSCSAVG00000008493	-	98	38.627	ENSEBUG00000012480	rars2	78	38.627	Eptatretus_burgeri
ENSCSAVG00000008493	-	99	41.841	ENSEASG00005005661	RARS2	79	41.841	Equus_asinus_asinus
ENSCSAVG00000008493	-	76	30.541	ENSEASG00005012782	RARS	53	30.541	Equus_asinus_asinus
ENSCSAVG00000008493	-	99	41.423	ENSECAG00000011589	RARS2	72	41.423	Equus_caballus
ENSCSAVG00000008493	-	99	35.579	ENSEEUG00000003098	RARS2	79	35.579	Erinaceus_europaeus
ENSCSAVG00000008493	-	99	42.553	ENSELUG00000016961	rars2	85	42.553	Esox_lucius
ENSCSAVG00000008493	-	99	41.983	ENSFCAG00000024551	RARS2	79	41.860	Felis_catus
ENSCSAVG00000008493	-	99	41.737	ENSFALG00000002936	RARS2	79	41.737	Ficedula_albicollis
ENSCSAVG00000008493	-	99	42.017	ENSFDAG00000013359	RARS2	79	42.017	Fukomys_damarensis
ENSCSAVG00000008493	-	80	30.691	ENSFHEG00000000411	rars	58	30.691	Fundulus_heteroclitus
ENSCSAVG00000008493	-	99	41.127	ENSFHEG00000020816	rars2	84	41.127	Fundulus_heteroclitus
ENSCSAVG00000008493	-	99	39.662	ENSGMOG00000005050	rars2	82	39.662	Gadus_morhua
ENSCSAVG00000008493	-	99	42.947	ENSGALG00000015806	RARS2	79	42.947	Gallus_gallus
ENSCSAVG00000008493	-	99	39.014	ENSGAFG00000001829	rars2	81	39.014	Gambusia_affinis
ENSCSAVG00000008493	-	97	41.558	ENSGACG00000008226	rars2	77	41.558	Gasterosteus_aculeatus
ENSCSAVG00000008493	-	99	41.474	ENSGAGG00000025105	RARS2	79	41.474	Gopherus_agassizii
ENSCSAVG00000008493	-	99	41.632	ENSGGOG00000010027	RARS2	79	41.632	Gorilla_gorilla
ENSCSAVG00000008493	-	97	41.756	ENSHBUG00000002243	rars2	78	41.756	Haplochromis_burtoni
ENSCSAVG00000008493	-	99	42.050	ENSHGLG00000001593	RARS2	79	42.050	Heterocephalus_glaber_female
ENSCSAVG00000008493	-	99	42.050	ENSHGLG00100012820	RARS2	79	42.050	Heterocephalus_glaber_male
ENSCSAVG00000008493	-	96	40.909	ENSHCOG00000007279	rars2	81	40.909	Hippocampus_comes
ENSCSAVG00000008493	-	80	30.946	ENSHCOG00000020064	rars	58	30.946	Hippocampus_comes
ENSCSAVG00000008493	-	98	38.004	ENSIPUG00000015528	RARS2	79	38.004	Ictalurus_punctatus
ENSCSAVG00000008493	-	99	41.807	ENSSTOG00000004466	RARS2	79	41.807	Ictidomys_tridecemlineatus
ENSCSAVG00000008493	-	94	38.876	ENSJJAG00000017673	Rars2	77	38.876	Jaculus_jaculus
ENSCSAVG00000008493	-	99	40.833	ENSKMAG00000019816	rars2	79	40.833	Kryptolebias_marmoratus
ENSCSAVG00000008493	-	97	41.304	ENSLBEG00000012135	rars2	90	41.304	Labrus_bergylta
ENSCSAVG00000008493	-	99	34.310	ENSLOCG00000016928	rars2	79	34.310	Lepisosteus_oculatus
ENSCSAVG00000008493	-	99	41.286	ENSLAFG00000004915	RARS2	80	41.286	Loxodonta_africana
ENSCSAVG00000008493	-	99	42.259	ENSMFAG00000039420	RARS2	81	42.050	Macaca_fascicularis
ENSCSAVG00000008493	-	99	42.050	ENSMMUG00000017039	RARS2	79	42.050	Macaca_mulatta
ENSCSAVG00000008493	-	93	39.686	ENSMNEG00000043383	RARS2	99	39.141	Macaca_nemestrina
ENSCSAVG00000008493	-	99	40.167	ENSMLEG00000036913	RARS2	79	40.167	Mandrillus_leucophaeus
ENSCSAVG00000008493	-	99	40.938	ENSMAMG00000003906	rars2	79	40.938	Mastacembelus_armatus
ENSCSAVG00000008493	-	97	41.756	ENSMZEG00005002255	rars2	78	41.756	Maylandia_zebra
ENSCSAVG00000008493	-	99	42.105	ENSMGAG00000013668	RARS2	79	42.105	Meleagris_gallopavo
ENSCSAVG00000008493	-	99	39.873	ENSMAUG00000008929	Rars2	79	39.873	Mesocricetus_auratus
ENSCSAVG00000008493	-	99	41.004	ENSMICG00000003097	RARS2	79	41.004	Microcebus_murinus
ENSCSAVG00000008493	-	98	41.756	ENSMOCG00000003114	Rars2	78	41.756	Microtus_ochrogaster
ENSCSAVG00000008493	-	76	30.270	ENSMOCG00000005240	Rars	54	30.270	Microtus_ochrogaster
ENSCSAVG00000008493	-	98	41.239	ENSMMOG00000015665	rars2	94	41.239	Mola_mola
ENSCSAVG00000008493	-	99	40.336	ENSMODG00000018307	RARS2	80	40.336	Monodelphis_domestica
ENSCSAVG00000008493	-	99	39.024	ENSMALG00000022188	rars2	87	39.024	Monopterus_albus
ENSCSAVG00000008493	-	99	40.506	MGP_CAROLIEiJ_G0025880	Rars2	79	40.506	Mus_caroli
ENSCSAVG00000008493	-	99	40.506	ENSMUSG00000028292	Rars2	79	40.506	Mus_musculus
ENSCSAVG00000008493	-	99	40.295	MGP_PahariEiJ_G0024003	Rars2	79	40.295	Mus_pahari
ENSCSAVG00000008493	-	99	40.717	MGP_SPRETEiJ_G0026829	Rars2	79	40.717	Mus_spretus
ENSCSAVG00000008493	-	99	41.139	ENSMPUG00000009453	RARS2	74	41.139	Mustela_putorius_furo
ENSCSAVG00000008493	-	99	42.227	ENSMLUG00000006165	RARS2	79	42.227	Myotis_lucifugus
ENSCSAVG00000008493	-	99	39.457	ENSNGAG00000023107	Rars2	80	39.457	Nannospalax_galili
ENSCSAVG00000008493	-	97	39.789	ENSNBRG00000022608	rars2	82	39.789	Neolamprologus_brichardi
ENSCSAVG00000008493	-	99	40.586	ENSNLEG00000012955	RARS2	80	40.586	Nomascus_leucogenys
ENSCSAVG00000008493	-	76	39.058	ENSMEUG00000015245	RARS2	69	39.058	Notamacropus_eugenii
ENSCSAVG00000008493	-	84	47.143	ENSOPRG00000012195	RARS2	67	47.143	Ochotona_princeps
ENSCSAVG00000008493	-	99	41.213	ENSODEG00000007822	RARS2	79	41.213	Octodon_degus
ENSCSAVG00000008493	-	97	39.300	ENSONIG00000005860	rars2	79	39.300	Oreochromis_niloticus
ENSCSAVG00000008493	-	99	41.561	ENSOANG00000000540	RARS2	80	41.561	Ornithorhynchus_anatinus
ENSCSAVG00000008493	-	99	41.509	ENSOCUG00000004871	RARS2	77	41.509	Oryctolagus_cuniculus
ENSCSAVG00000008493	-	99	39.749	ENSORLG00000011436	rars2	80	39.749	Oryzias_latipes
ENSCSAVG00000008493	-	99	39.540	ENSORLG00020017396	rars2	84	39.540	Oryzias_latipes_hni
ENSCSAVG00000008493	-	99	39.749	ENSORLG00015012326	rars2	86	37.849	Oryzias_latipes_hsok
ENSCSAVG00000008493	-	99	39.331	ENSOMEG00000022692	rars2	80	39.331	Oryzias_melastigma
ENSCSAVG00000008493	-	99	43.096	ENSOGAG00000017143	RARS2	79	43.096	Otolemur_garnettii
ENSCSAVG00000008493	-	99	42.050	ENSOARG00000013003	RARS2	79	42.050	Ovis_aries
ENSCSAVG00000008493	-	99	41.632	ENSPPAG00000036963	RARS2	79	41.632	Pan_paniscus
ENSCSAVG00000008493	-	99	41.772	ENSPPRG00000003040	RARS2	79	41.772	Panthera_pardus
ENSCSAVG00000008493	-	99	41.983	ENSPTIG00000018696	RARS2	79	41.983	Panthera_tigris_altaica
ENSCSAVG00000008493	-	99	41.423	ENSPTRG00000018407	RARS2	79	41.423	Pan_troglodytes
ENSCSAVG00000008493	-	99	42.050	ENSPANG00000000663	RARS2	80	42.050	Papio_anubis
ENSCSAVG00000008493	-	99	40.506	ENSPKIG00000017877	rars2	79	40.506	Paramormyrops_kingsleyae
ENSCSAVG00000008493	-	87	37.530	ENSPSIG00000012072	RARS2	99	37.530	Pelodiscus_sinensis
ENSCSAVG00000008493	-	97	42.675	ENSPMGG00000013710	rars2	92	41.164	Periophthalmus_magnuspinnatus
ENSCSAVG00000008493	-	99	40.717	ENSPEMG00000014309	Rars2	82	40.717	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008493	-	99	36.743	ENSPMAG00000007604	rars2	79	36.743	Petromyzon_marinus
ENSCSAVG00000008493	-	99	40.336	ENSPCIG00000026604	RARS2	80	40.336	Phascolarctos_cinereus
ENSCSAVG00000008493	-	99	39.212	ENSPFOG00000018503	rars2	79	39.212	Poecilia_formosa
ENSCSAVG00000008493	-	80	30.435	ENSPLAG00000022374	rars	59	30.435	Poecilia_latipinna
ENSCSAVG00000008493	-	99	38.797	ENSPLAG00000019436	rars2	80	38.797	Poecilia_latipinna
ENSCSAVG00000008493	-	99	38.797	ENSPMEG00000012427	rars2	80	38.797	Poecilia_mexicana
ENSCSAVG00000008493	-	99	35.565	ENSPREG00000009322	rars2	90	35.565	Poecilia_reticulata
ENSCSAVG00000008493	-	99	41.423	ENSPPYG00000016829	RARS2	80	41.423	Pongo_abelii
ENSCSAVG00000008493	-	92	40.858	ENSPCAG00000007709	RARS2	76	40.858	Procavia_capensis
ENSCSAVG00000008493	-	76	31.351	ENSPCAG00000009628	RARS	58	31.351	Procavia_capensis
ENSCSAVG00000008493	-	99	40.833	ENSPCOG00000016317	RARS2	80	40.833	Propithecus_coquereli
ENSCSAVG00000008493	-	99	41.841	ENSPVAG00000005013	RARS2	79	41.841	Pteropus_vampyrus
ENSCSAVG00000008493	-	76	51.807	ENSPVAG00000005760	RARS	57	51.807	Pteropus_vampyrus
ENSCSAVG00000008493	-	97	41.756	ENSPNYG00000023401	rars2	80	41.756	Pundamilia_nyererei
ENSCSAVG00000008493	-	97	41.202	ENSPNAG00000007263	rars2	80	40.586	Pygocentrus_nattereri
ENSCSAVG00000008493	-	99	40.421	ENSRNOG00000008643	Rars2	80	40.421	Rattus_norvegicus
ENSCSAVG00000008493	-	99	41.632	ENSRBIG00000035898	RARS2	81	41.632	Rhinopithecus_bieti
ENSCSAVG00000008493	-	99	41.632	ENSRROG00000045733	RARS2	80	41.632	Rhinopithecus_roxellana
ENSCSAVG00000008493	-	99	34.694	YHR091C	MSR1	74	34.694	Saccharomyces_cerevisiae
ENSCSAVG00000008493	-	98	35.774	YDR341C	YDR341C	76	35.774	Saccharomyces_cerevisiae
ENSCSAVG00000008493	-	99	41.004	ENSSBOG00000006101	RARS2	80	41.004	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008493	-	99	40.084	ENSSHAG00000010566	RARS2	96	40.084	Sarcophilus_harrisii
ENSCSAVG00000008493	-	99	39.662	ENSSFOG00015021960	rars2	80	39.662	Scleropages_formosus
ENSCSAVG00000008493	-	99	40.756	ENSSMAG00000001661	rars2	79	40.756	Scophthalmus_maximus
ENSCSAVG00000008493	-	99	40.377	ENSSDUG00000004354	rars2	91	39.662	Seriola_dumerili
ENSCSAVG00000008493	-	99	40.377	ENSSLDG00000024195	rars2	80	40.377	Seriola_lalandi_dorsalis
ENSCSAVG00000008493	-	99	40.586	ENSSARG00000006016	RARS2	80	40.586	Sorex_araneus
ENSCSAVG00000008493	-	98	40.987	ENSSPUG00000001067	RARS2	82	40.987	Sphenodon_punctatus
ENSCSAVG00000008493	-	99	41.102	ENSSPAG00000013619	rars2	79	41.102	Stegastes_partitus
ENSCSAVG00000008493	-	99	41.929	ENSSSCG00000004303	RARS2	83	41.841	Sus_scrofa
ENSCSAVG00000008493	-	99	40.717	ENSTGUG00000012447	RARS2	79	40.717	Taeniopygia_guttata
ENSCSAVG00000008493	-	99	40.466	ENSTRUG00000017791	rars2	79	40.466	Takifugu_rubripes
ENSCSAVG00000008493	-	99	39.496	ENSTNIG00000016407	rars2	79	39.496	Tetraodon_nigroviridis
ENSCSAVG00000008493	-	74	36.786	ENSTBEG00000003580	RARS2	59	36.786	Tupaia_belangeri
ENSCSAVG00000008493	-	93	40.498	ENSTTRG00000008930	RARS2	78	40.498	Tursiops_truncatus
ENSCSAVG00000008493	-	99	41.350	ENSUAMG00000028068	RARS2	93	38.925	Ursus_americanus
ENSCSAVG00000008493	-	98	42.060	ENSUMAG00000010416	RARS2	78	42.060	Ursus_maritimus
ENSCSAVG00000008493	-	93	41.071	ENSVPAG00000004163	RARS2	78	41.071	Vicugna_pacos
ENSCSAVG00000008493	-	76	31.165	ENSVVUG00000003095	RARS	65	31.233	Vulpes_vulpes
ENSCSAVG00000008493	-	99	41.841	ENSVVUG00000009876	RARS2	92	39.496	Vulpes_vulpes
ENSCSAVG00000008493	-	98	40.377	ENSXETG00000019802	rars2	79	40.377	Xenopus_tropicalis
ENSCSAVG00000008493	-	99	40.289	ENSXMAG00000016921	rars2	80	40.289	Xiphophorus_maculatus