EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008516 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4269 bases
Position: chrreftig_3:2002316-2006584
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014551	Lactamase_B	PF00753.27	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014717	-	1055	-	ENSCSAVP00000014551	281 (aa)	-	H2ZAD6

Gene Model

Click here to download ENSCSAVG00000008516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008516	-	84	64.706	ENSCSAVG00000009618	-	96	69.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008516	-	86	56.379	ENSG00000105755	ETHE1	95	56.379	Homo_sapiens
ENSCSAVG00000008516	-	80	57.522	ENSAPOG00000023998	ethe1	77	57.522	Acanthochromis_polyacanthus
ENSCSAVG00000008516	-	82	56.522	ENSAMEG00000004309	ETHE1	97	56.522	Ailuropoda_melanoleuca
ENSCSAVG00000008516	-	67	59.358	ENSACIG00000000998	ethe1	70	58.462	Amphilophus_citrinellus
ENSCSAVG00000008516	-	80	54.911	ENSACIG00000001047	ethe1	86	54.911	Amphilophus_citrinellus
ENSCSAVG00000008516	-	80	56.696	ENSACIG00000001017	ethe1	96	56.696	Amphilophus_citrinellus
ENSCSAVG00000008516	-	80	58.850	ENSAOCG00000009669	ethe1	74	58.850	Amphiprion_ocellaris
ENSCSAVG00000008516	-	80	58.850	ENSAPEG00000003969	ethe1	77	58.850	Amphiprion_percula
ENSCSAVG00000008516	-	79	58.371	ENSATEG00000008035	ethe1	98	58.371	Anabas_testudineus
ENSCSAVG00000008516	-	88	57.317	ENSATEG00000007692	ETHE1	94	59.729	Anabas_testudineus
ENSCSAVG00000008516	-	87	53.061	ENSATEG00000007855	ethe1	94	52.083	Anabas_testudineus
ENSCSAVG00000008516	-	88	55.691	ENSATEG00000007964	ethe1	95	57.207	Anabas_testudineus
ENSCSAVG00000008516	-	88	54.472	ENSATEG00000007777	ethe1	83	54.472	Anabas_testudineus
ENSCSAVG00000008516	-	84	59.574	ENSACAG00000004321	ETHE1	90	59.574	Anolis_carolinensis
ENSCSAVG00000008516	-	79	57.919	ENSANAG00000033114	ETHE1	97	57.919	Aotus_nancymaae
ENSCSAVG00000008516	-	88	54.435	ENSACLG00000001644	ethe1	83	54.435	Astatotilapia_calliptera
ENSCSAVG00000008516	-	79	48.869	ENSAMXG00000037704	ethe1	93	48.869	Astyanax_mexicanus
ENSCSAVG00000008516	-	87	56.148	ENSBTAG00000004379	ETHE1	94	56.148	Bos_taurus
ENSCSAVG00000008516	-	81	57.642	WBGene00007886	ethe-1	97	57.642	Caenorhabditis_elegans
ENSCSAVG00000008516	-	76	58.879	ENSCJAG00000008394	-	86	58.879	Callithrix_jacchus
ENSCSAVG00000008516	-	86	55.285	ENSCJAG00000013606	-	95	55.285	Callithrix_jacchus
ENSCSAVG00000008516	-	87	55.328	ENSCAFG00000004755	ETHE1	94	55.328	Canis_familiaris
ENSCSAVG00000008516	-	87	55.328	ENSCAFG00020014000	ETHE1	94	55.328	Canis_lupus_dingo
ENSCSAVG00000008516	-	87	55.738	ENSCHIG00000013680	ETHE1	94	55.738	Capra_hircus
ENSCSAVG00000008516	-	79	58.371	ENSTSYG00000035197	ETHE1	87	58.371	Carlito_syrichta
ENSCSAVG00000008516	-	75	58.571	ENSCAPG00000011904	ETHE1	84	58.571	Cavia_aperea
ENSCSAVG00000008516	-	79	58.824	ENSCPOG00000000484	ETHE1	97	58.824	Cavia_porcellus
ENSCSAVG00000008516	-	86	55.967	ENSCCAG00000025485	ETHE1	95	55.967	Cebus_capucinus
ENSCSAVG00000008516	-	86	55.556	ENSCATG00000029420	ETHE1	95	55.556	Cercocebus_atys
ENSCSAVG00000008516	-	87	55.738	ENSCLAG00000001597	ETHE1	94	55.738	Chinchilla_lanigera
ENSCSAVG00000008516	-	86	55.556	ENSCSAG00000003404	ETHE1	95	55.556	Chlorocebus_sabaeus
ENSCSAVG00000008516	-	84	60.426	ENSCPBG00000013116	ETHE1	87	60.426	Chrysemys_picta_bellii
ENSCSAVG00000008516	-	54	89.474	ENSCING00000010790	-	99	89.474	Ciona_intestinalis
ENSCSAVG00000008516	-	81	62.281	ENSCING00000002699	-	96	62.281	Ciona_intestinalis
ENSCSAVG00000008516	-	86	55.556	ENSCANG00000037959	ETHE1	95	55.556	Colobus_angolensis_palliatus
ENSCSAVG00000008516	-	87	55.738	ENSCGRG00001000826	Ethe1	94	55.738	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008516	-	85	54.545	ENSCSEG00000012287	ethe1	91	56.109	Cynoglossus_semilaevis
ENSCSAVG00000008516	-	80	57.080	ENSCVAG00000015428	ETHE1	93	55.804	Cyprinodon_variegatus
ENSCSAVG00000008516	-	79	57.466	ENSCVAG00000015391	ethe1	85	57.466	Cyprinodon_variegatus
ENSCSAVG00000008516	-	80	59.111	ENSDARG00000005713	ethe1	81	59.111	Danio_rerio
ENSCSAVG00000008516	-	79	60.181	ENSDORG00000002169	Ethe1	92	60.181	Dipodomys_ordii
ENSCSAVG00000008516	-	80	53.540	FBgn0050022	CG30022	81	53.540	Drosophila_melanogaster
ENSCSAVG00000008516	-	79	49.774	ENSETEG00000009673	ETHE1	97	49.774	Echinops_telfairi
ENSCSAVG00000008516	-	87	56.557	ENSEASG00005013250	ETHE1	94	56.557	Equus_asinus_asinus
ENSCSAVG00000008516	-	87	56.557	ENSECAG00000010891	ETHE1	94	56.557	Equus_caballus
ENSCSAVG00000008516	-	81	57.642	ENSELUG00000016303	ethe1	79	57.642	Esox_lucius
ENSCSAVG00000008516	-	87	55.738	ENSFCAG00000027744	ETHE1	94	55.738	Felis_catus
ENSCSAVG00000008516	-	87	56.557	ENSFDAG00000002222	ETHE1	96	56.557	Fukomys_damarensis
ENSCSAVG00000008516	-	80	57.080	ENSFHEG00000007931	ETHE1	76	57.080	Fundulus_heteroclitus
ENSCSAVG00000008516	-	77	54.419	ENSGMOG00000014903	ethe1	77	54.419	Gadus_morhua
ENSCSAVG00000008516	-	82	58.009	ENSGAFG00000010095	ethe1	98	58.009	Gambusia_affinis
ENSCSAVG00000008516	-	80	55.310	ENSGAFG00000010076	ethe1	97	54.751	Gambusia_affinis
ENSCSAVG00000008516	-	82	56.710	ENSGACG00000012528	ethe1	79	56.710	Gasterosteus_aculeatus
ENSCSAVG00000008516	-	84	58.475	ENSGAGG00000011637	ETHE1	88	58.475	Gopherus_agassizii
ENSCSAVG00000008516	-	69	55.385	ENSGGOG00000003960	ETHE1	90	55.385	Gorilla_gorilla
ENSCSAVG00000008516	-	88	53.629	ENSHBUG00000017833	ethe1	83	53.629	Haplochromis_burtoni
ENSCSAVG00000008516	-	86	55.967	ENSHGLG00000006665	ETHE1	95	55.967	Heterocephalus_glaber_female
ENSCSAVG00000008516	-	86	55.967	ENSHGLG00100006828	ETHE1	95	55.967	Heterocephalus_glaber_male
ENSCSAVG00000008516	-	88	53.968	ENSHCOG00000006738	ethe1	85	53.968	Hippocampus_comes
ENSCSAVG00000008516	-	86	54.545	ENSIPUG00000008948	ethe1	92	54.545	Ictalurus_punctatus
ENSCSAVG00000008516	-	84	55.932	ENSSTOG00000023958	ETHE1	95	55.144	Ictidomys_tridecemlineatus
ENSCSAVG00000008516	-	61	59.884	ENSJJAG00000013800	Ethe1	97	59.884	Jaculus_jaculus
ENSCSAVG00000008516	-	87	55.510	ENSKMAG00000019934	ethe1	95	55.510	Kryptolebias_marmoratus
ENSCSAVG00000008516	-	80	56.637	ENSLBEG00000024552	ethe1	76	56.637	Labrus_bergylta
ENSCSAVG00000008516	-	58	54.321	ENSLACG00000008551	ethe1	81	54.321	Latimeria_chalumnae
ENSCSAVG00000008516	-	80	60.177	ENSLOCG00000005717	ethe1	77	60.177	Lepisosteus_oculatus
ENSCSAVG00000008516	-	86	55.144	ENSLAFG00000012685	ETHE1	95	55.144	Loxodonta_africana
ENSCSAVG00000008516	-	86	55.556	ENSMFAG00000036993	ETHE1	95	55.556	Macaca_fascicularis
ENSCSAVG00000008516	-	86	55.556	ENSMMUG00000019264	ETHE1	95	55.556	Macaca_mulatta
ENSCSAVG00000008516	-	86	55.556	ENSMNEG00000039250	ETHE1	95	55.556	Macaca_nemestrina
ENSCSAVG00000008516	-	88	56.504	ENSMAMG00000009123	ETHE1	83	56.504	Mastacembelus_armatus
ENSCSAVG00000008516	-	88	53.629	ENSMZEG00005007552	ethe1	83	53.629	Maylandia_zebra
ENSCSAVG00000008516	-	81	52.609	ENSMZEG00005007535	ethe1	87	52.609	Maylandia_zebra
ENSCSAVG00000008516	-	87	54.918	ENSMICG00000014648	ETHE1	94	54.918	Microcebus_murinus
ENSCSAVG00000008516	-	87	54.918	ENSMOCG00000006120	Ethe1	94	54.918	Microtus_ochrogaster
ENSCSAVG00000008516	-	79	57.658	ENSMMOG00000014454	ethe1	89	57.658	Mola_mola
ENSCSAVG00000008516	-	70	56.345	ENSMALG00000010451	ethe1	96	56.345	Monopterus_albus
ENSCSAVG00000008516	-	88	54.878	ENSMALG00000010423	ethe1	83	57.399	Monopterus_albus
ENSCSAVG00000008516	-	87	55.738	MGP_CAROLIEiJ_G0029342	Ethe1	94	55.738	Mus_caroli
ENSCSAVG00000008516	-	87	55.738	ENSMUSG00000064254	Ethe1	94	55.738	Mus_musculus
ENSCSAVG00000008516	-	87	43.033	MGP_PahariEiJ_G0021193	Ethe1	92	43.033	Mus_pahari
ENSCSAVG00000008516	-	87	55.738	MGP_SPRETEiJ_G0030436	Ethe1	94	55.738	Mus_spretus
ENSCSAVG00000008516	-	87	56.148	ENSMPUG00000006865	ETHE1	94	56.148	Mustela_putorius_furo
ENSCSAVG00000008516	-	87	54.694	ENSNGAG00000010635	Ethe1	94	54.694	Nannospalax_galili
ENSCSAVG00000008516	-	90	50.923	ENSNBRG00000011439	ethe1	98	50.923	Neolamprologus_brichardi
ENSCSAVG00000008516	-	58	55.488	ENSNBRG00000001559	-	93	55.488	Neolamprologus_brichardi
ENSCSAVG00000008516	-	86	55.967	ENSNLEG00000001395	ETHE1	95	55.967	Nomascus_leucogenys
ENSCSAVG00000008516	-	76	61.033	ENSMEUG00000014820	ETHE1	94	61.033	Notamacropus_eugenii
ENSCSAVG00000008516	-	83	55.794	ENSOPRG00000003231	-	96	55.794	Ochotona_princeps
ENSCSAVG00000008516	-	87	56.557	ENSODEG00000008887	ETHE1	94	56.557	Octodon_degus
ENSCSAVG00000008516	-	80	59.292	ENSORLG00000015211	ethe1	77	59.292	Oryzias_latipes
ENSCSAVG00000008516	-	80	59.292	ENSORLG00020017793	ethe1	77	59.292	Oryzias_latipes_hni
ENSCSAVG00000008516	-	80	59.292	ENSORLG00015002734	ethe1	77	59.292	Oryzias_latipes_hsok
ENSCSAVG00000008516	-	80	60.619	ENSOMEG00000021188	ethe1	77	60.619	Oryzias_melastigma
ENSCSAVG00000008516	-	86	55.967	ENSOGAG00000009504	ETHE1	95	55.967	Otolemur_garnettii
ENSCSAVG00000008516	-	87	51.230	ENSOARG00000008652	ETHE1	94	51.230	Ovis_aries
ENSCSAVG00000008516	-	86	49.794	ENSPPAG00000032831	ETHE1	95	49.794	Pan_paniscus
ENSCSAVG00000008516	-	87	55.738	ENSPPRG00000009903	ETHE1	94	55.738	Panthera_pardus
ENSCSAVG00000008516	-	79	58.296	ENSPTIG00000021901	ETHE1	92	58.296	Panthera_tigris_altaica
ENSCSAVG00000008516	-	86	56.379	ENSPTRG00000011082	ETHE1	95	56.379	Pan_troglodytes
ENSCSAVG00000008516	-	86	55.556	ENSPANG00000013980	ETHE1	95	55.556	Papio_anubis
ENSCSAVG00000008516	-	81	58.515	ENSPKIG00000023493	ethe1	79	58.515	Paramormyrops_kingsleyae
ENSCSAVG00000008516	-	80	57.522	ENSPMGG00000007528	-	90	57.522	Periophthalmus_magnuspinnatus
ENSCSAVG00000008516	-	79	55.656	ENSPMGG00000010684	ethe1	96	55.656	Periophthalmus_magnuspinnatus
ENSCSAVG00000008516	-	87	55.328	ENSPEMG00000023092	Ethe1	94	55.328	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008516	-	79	58.108	ENSPMAG00000004229	ethe1	88	58.108	Petromyzon_marinus
ENSCSAVG00000008516	-	84	57.021	ENSPCIG00000020851	-	89	57.021	Phascolarctos_cinereus
ENSCSAVG00000008516	-	87	54.098	ENSPLAG00000007257	ethe1	92	46.212	Poecilia_latipinna
ENSCSAVG00000008516	-	87	53.689	ENSPMEG00000010476	ethe1	82	53.689	Poecilia_mexicana
ENSCSAVG00000008516	-	80	60.444	ENSPMEG00000010483	ethe1	96	60.444	Poecilia_mexicana
ENSCSAVG00000008516	-	80	56.195	ENSPREG00000015603	ETHE1	77	56.195	Poecilia_reticulata
ENSCSAVG00000008516	-	86	55.556	ENSPPYG00000010061	ETHE1	95	55.556	Pongo_abelii
ENSCSAVG00000008516	-	86	45.714	ENSPCAG00000006491	ETHE1	96	45.714	Procavia_capensis
ENSCSAVG00000008516	-	69	54.359	ENSPCOG00000023403	ETHE1	73	54.359	Propithecus_coquereli
ENSCSAVG00000008516	-	87	56.148	ENSPVAG00000016887	ETHE1	94	56.148	Pteropus_vampyrus
ENSCSAVG00000008516	-	81	52.174	ENSPNYG00000013048	ETHE1	87	52.174	Pundamilia_nyererei
ENSCSAVG00000008516	-	80	55.310	ENSPNYG00000013029	ETHE1	96	55.310	Pundamilia_nyererei
ENSCSAVG00000008516	-	88	54.032	ENSPNYG00000013000	ethe1	83	54.032	Pundamilia_nyererei
ENSCSAVG00000008516	-	80	56.637	ENSPNAG00000004361	ethe1	85	56.637	Pygocentrus_nattereri
ENSCSAVG00000008516	-	87	54.918	ENSRNOG00000019982	Ethe1	94	54.918	Rattus_norvegicus
ENSCSAVG00000008516	-	86	55.556	ENSRBIG00000007569	ETHE1	95	55.556	Rhinopithecus_bieti
ENSCSAVG00000008516	-	86	55.967	ENSRROG00000028814	ETHE1	95	55.967	Rhinopithecus_roxellana
ENSCSAVG00000008516	-	79	48.198	ENSSBOG00000027526	ETHE1	87	47.534	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008516	-	86	55.691	ENSSFOG00015019848	ethe1	84	55.691	Scleropages_formosus
ENSCSAVG00000008516	-	82	58.009	ENSSMAG00000004866	ethe1	78	58.009	Scophthalmus_maximus
ENSCSAVG00000008516	-	80	60.619	ENSSDUG00000011372	ethe1	75	60.619	Seriola_dumerili
ENSCSAVG00000008516	-	63	60.452	ENSSLDG00000022087	ethe1	65	60.452	Seriola_lalandi_dorsalis
ENSCSAVG00000008516	-	65	58.791	ENSSARG00000012826	ETHE1	96	58.791	Sorex_araneus
ENSCSAVG00000008516	-	85	54.583	ENSSPUG00000015962	ETHE1	97	57.919	Sphenodon_punctatus
ENSCSAVG00000008516	-	81	57.269	ENSSPAG00000012215	ethe1	77	57.269	Stegastes_partitus
ENSCSAVG00000008516	-	84	54.237	ENSSSCG00000003064	ETHE1	93	54.237	Sus_scrofa
ENSCSAVG00000008516	-	84	54.043	ENSTRUG00000009587	ethe1	79	54.043	Takifugu_rubripes
ENSCSAVG00000008516	-	62	57.225	ENSTNIG00000005019	-	98	57.225	Tetraodon_nigroviridis
ENSCSAVG00000008516	-	90	51.383	ENSTNIG00000005018	ethe1	99	51.383	Tetraodon_nigroviridis
ENSCSAVG00000008516	-	84	55.085	ENSTTRG00000014762	ETHE1	93	55.085	Tursiops_truncatus
ENSCSAVG00000008516	-	87	55.328	ENSUAMG00000010548	ETHE1	94	55.328	Ursus_americanus
ENSCSAVG00000008516	-	79	58.108	ENSUMAG00000022938	ETHE1	91	58.108	Ursus_maritimus
ENSCSAVG00000008516	-	61	61.628	ENSVPAG00000005250	ETHE1	68	61.628	Vicugna_pacos
ENSCSAVG00000008516	-	83	54.936	ENSVVUG00000008821	ETHE1	97	57.919	Vulpes_vulpes
ENSCSAVG00000008516	-	81	58.333	ENSXETG00000025507	ethe1	89	58.333	Xenopus_tropicalis
ENSCSAVG00000008516	-	87	48.387	ENSXCOG00000007813	ethe1	82	48.387	Xiphophorus_couchianus
ENSCSAVG00000008516	-	79	59.459	ENSXCOG00000007814	ethe1	79	59.459	Xiphophorus_couchianus
ENSCSAVG00000008516	-	80	55.752	ENSXMAG00000025910	ETHE1	77	55.752	Xiphophorus_maculatus
ENSCSAVG00000008516	-	82	58.874	ENSXMAG00000024588	ethe1	98	58.874	Xiphophorus_maculatus