EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008586 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8219 bases
Position: chrreftig_25:1328700-1336918
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014693	RNA_pol_Rpc82	PF05645.13	4.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014861	-	1578	-	ENSCSAVP00000014693	525 (aa)	-	H2ZAS8

Gene Model

Click here to download ENSCSAVG00000008586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008586	-	99	47.280	ENSG00000186141	POLR3C	99	47.280	Homo_sapiens
ENSCSAVG00000008586	-	99	43.327	ENSAPOG00000008722	polr3c	99	43.223	Acanthochromis_polyacanthus
ENSCSAVG00000008586	-	99	47.477	ENSAMEG00000017531	POLR3C	99	47.477	Ailuropoda_melanoleuca
ENSCSAVG00000008586	-	99	42.701	ENSACIG00000008064	polr3c	99	42.701	Amphilophus_citrinellus
ENSCSAVG00000008586	-	99	44.382	ENSAOCG00000011695	polr3c	99	44.382	Amphiprion_ocellaris
ENSCSAVG00000008586	-	99	44.382	ENSAPEG00000004426	polr3c	99	44.382	Amphiprion_percula
ENSCSAVG00000008586	-	99	43.327	ENSATEG00000023618	polr3c	92	43.510	Anabas_testudineus
ENSCSAVG00000008586	-	99	47.467	ENSANAG00000036434	POLR3C	99	47.467	Aotus_nancymaae
ENSCSAVG00000008586	-	99	42.960	ENSACLG00000019970	polr3c	99	42.960	Astatotilapia_calliptera
ENSCSAVG00000008586	-	99	43.750	ENSAMXG00000008273	polr3c	99	43.750	Astyanax_mexicanus
ENSCSAVG00000008586	-	99	48.037	ENSBTAG00000021637	POLR3C	99	48.037	Bos_taurus
ENSCSAVG00000008586	-	99	47.467	ENSCJAG00000002314	POLR3C	99	47.467	Callithrix_jacchus
ENSCSAVG00000008586	-	99	47.290	ENSCAFG00000011257	POLR3C	99	47.471	Canis_familiaris
ENSCSAVG00000008586	-	95	47.471	ENSCAFG00020020066	POLR3C	99	47.471	Canis_lupus_dingo
ENSCSAVG00000008586	-	99	48.037	ENSCHIG00000022431	POLR3C	99	48.037	Capra_hircus
ENSCSAVG00000008586	-	99	47.477	ENSTSYG00000002292	POLR3C	99	47.477	Carlito_syrichta
ENSCSAVG00000008586	-	95	38.281	ENSCAPG00000011559	POLR3C	100	38.281	Cavia_aperea
ENSCSAVG00000008586	-	99	47.290	ENSCPOG00000004654	POLR3C	99	47.290	Cavia_porcellus
ENSCSAVG00000008586	-	99	47.467	ENSCCAG00000027077	POLR3C	99	47.467	Cebus_capucinus
ENSCSAVG00000008586	-	99	47.081	ENSCATG00000040166	POLR3C	99	47.655	Cercocebus_atys
ENSCSAVG00000008586	-	97	49.796	ENSCLAG00000001652	POLR3C	99	49.796	Chinchilla_lanigera
ENSCSAVG00000008586	-	99	47.842	ENSCSAG00000001762	POLR3C	99	47.842	Chlorocebus_sabaeus
ENSCSAVG00000008586	-	99	46.916	ENSCHOG00000006911	POLR3C	99	46.916	Choloepus_hoffmanni
ENSCSAVG00000008586	-	99	48.496	ENSCPBG00000007883	POLR3C	99	48.496	Chrysemys_picta_bellii
ENSCSAVG00000008586	-	99	76.515	ENSCING00000007024	-	99	77.083	Ciona_intestinalis
ENSCSAVG00000008586	-	99	47.655	ENSCANG00000032538	POLR3C	99	47.655	Colobus_angolensis_palliatus
ENSCSAVG00000008586	-	99	46.904	ENSCGRG00001005471	Polr3c	99	46.904	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008586	-	99	46.904	ENSCGRG00000016787	Polr3c	99	46.904	Cricetulus_griseus_crigri
ENSCSAVG00000008586	-	99	42.672	ENSCSEG00000002425	polr3c	98	42.672	Cynoglossus_semilaevis
ENSCSAVG00000008586	-	99	42.364	ENSCVAG00000022458	polr3c	99	42.545	Cyprinodon_variegatus
ENSCSAVG00000008586	-	99	42.364	ENSCVAG00000009443	polr3c	99	42.545	Cyprinodon_variegatus
ENSCSAVG00000008586	-	99	45.203	ENSDARG00000057562	polr3c	99	45.203	Danio_rerio
ENSCSAVG00000008586	-	72	48.831	ENSDNOG00000012149	POLR3C	99	48.953	Dasypus_novemcinctus
ENSCSAVG00000008586	-	99	47.477	ENSDORG00000013430	Polr3c	99	47.477	Dipodomys_ordii
ENSCSAVG00000008586	-	85	46.916	ENSETEG00000017696	POLR3C	84	47.137	Echinops_telfairi
ENSCSAVG00000008586	-	99	47.850	ENSEASG00005007417	POLR3C	99	48.030	Equus_asinus_asinus
ENSCSAVG00000008586	-	99	46.916	ENSECAG00000023713	POLR3C	99	46.916	Equus_caballus
ENSCSAVG00000008586	-	99	45.113	ENSEEUG00000011124	POLR3C	99	45.301	Erinaceus_europaeus
ENSCSAVG00000008586	-	99	44.362	ENSELUG00000013209	polr3c	99	44.547	Esox_lucius
ENSCSAVG00000008586	-	99	47.556	ENSFCAG00000013360	POLR3C	99	47.477	Felis_catus
ENSCSAVG00000008586	-	99	47.664	ENSFDAG00000021078	POLR3C	99	47.664	Fukomys_damarensis
ENSCSAVG00000008586	-	99	42.029	ENSFHEG00000000872	polr3c	99	42.676	Fundulus_heteroclitus
ENSCSAVG00000008586	-	99	42.385	ENSGMOG00000018937	polr3c	99	42.385	Gadus_morhua
ENSCSAVG00000008586	-	86	48.052	ENSGALG00000052515	-	100	47.835	Gallus_gallus
ENSCSAVG00000008586	-	99	42.048	ENSGAFG00000014721	polr3c	99	42.596	Gambusia_affinis
ENSCSAVG00000008586	-	99	44.134	ENSGACG00000011829	polr3c	99	44.134	Gasterosteus_aculeatus
ENSCSAVG00000008586	-	99	48.496	ENSGAGG00000010176	POLR3C	99	48.496	Gopherus_agassizii
ENSCSAVG00000008586	-	99	47.092	ENSGGOG00000007279	POLR3C	99	47.092	Gorilla_gorilla
ENSCSAVG00000008586	-	99	42.960	ENSHBUG00000003619	polr3c	99	42.960	Haplochromis_burtoni
ENSCSAVG00000008586	-	99	47.477	ENSHGLG00000014978	POLR3C	99	47.477	Heterocephalus_glaber_female
ENSCSAVG00000008586	-	99	47.477	ENSHGLG00100015620	POLR3C	99	47.477	Heterocephalus_glaber_male
ENSCSAVG00000008586	-	99	43.727	ENSHCOG00000000823	polr3c	99	43.727	Hippocampus_comes
ENSCSAVG00000008586	-	99	44.384	ENSIPUG00000008657	polr3c	99	44.384	Ictalurus_punctatus
ENSCSAVG00000008586	-	99	47.556	ENSSTOG00000014601	POLR3C	99	47.556	Ictidomys_tridecemlineatus
ENSCSAVG00000008586	-	99	46.617	ENSJJAG00000011447	Polr3c	99	46.617	Jaculus_jaculus
ENSCSAVG00000008586	-	99	41.712	ENSKMAG00000001574	polr3c	99	41.530	Kryptolebias_marmoratus
ENSCSAVG00000008586	-	99	43.534	ENSLBEG00000026567	polr3c	99	43.534	Labrus_bergylta
ENSCSAVG00000008586	-	99	42.402	ENSLACG00000017216	POLR3C	99	42.884	Latimeria_chalumnae
ENSCSAVG00000008586	-	99	38.734	ENSLOCG00000006400	polr3c	99	39.292	Lepisosteus_oculatus
ENSCSAVG00000008586	-	99	47.290	ENSLAFG00000029485	POLR3C	99	47.290	Loxodonta_africana
ENSCSAVG00000008586	-	99	47.655	ENSMFAG00000040338	POLR3C	99	47.655	Macaca_fascicularis
ENSCSAVG00000008586	-	99	47.655	ENSMMUG00000016735	POLR3C	99	47.655	Macaca_mulatta
ENSCSAVG00000008586	-	99	47.655	ENSMNEG00000040944	POLR3C	99	47.655	Macaca_nemestrina
ENSCSAVG00000008586	-	99	47.655	ENSMLEG00000031091	POLR3C	99	47.655	Mandrillus_leucophaeus
ENSCSAVG00000008586	-	99	42.623	ENSMAMG00000014770	polr3c	99	42.623	Mastacembelus_armatus
ENSCSAVG00000008586	-	99	42.599	ENSMZEG00005015882	polr3c	99	42.599	Maylandia_zebra
ENSCSAVG00000008586	-	99	46.904	ENSMAUG00000001454	-	99	46.904	Mesocricetus_auratus
ENSCSAVG00000008586	-	72	42.268	ENSMAUG00000021521	-	93	42.268	Mesocricetus_auratus
ENSCSAVG00000008586	-	99	47.744	ENSMICG00000034253	POLR3C	99	47.744	Microcebus_murinus
ENSCSAVG00000008586	-	99	44.173	ENSMOCG00000000997	Polr3c	99	44.173	Microtus_ochrogaster
ENSCSAVG00000008586	-	99	43.199	ENSMMOG00000003989	polr3c	99	43.199	Mola_mola
ENSCSAVG00000008586	-	99	46.139	ENSMODG00000018745	-	73	46.717	Monodelphis_domestica
ENSCSAVG00000008586	-	99	42.779	ENSMALG00000000156	polr3c	99	42.779	Monopterus_albus
ENSCSAVG00000008586	-	99	46.904	MGP_CAROLIEiJ_G0025390	Polr3c	99	47.092	Mus_caroli
ENSCSAVG00000008586	-	99	47.092	ENSMUSG00000028099	Polr3c	99	47.092	Mus_musculus
ENSCSAVG00000008586	-	99	46.717	MGP_PahariEiJ_G0026835	Polr3c	99	46.904	Mus_pahari
ENSCSAVG00000008586	-	99	46.529	MGP_SPRETEiJ_G0026337	Polr3c	99	46.717	Mus_spretus
ENSCSAVG00000008586	-	99	47.477	ENSMPUG00000000656	POLR3C	99	47.477	Mustela_putorius_furo
ENSCSAVG00000008586	-	99	46.241	ENSMLUG00000004060	POLR3C	99	46.241	Myotis_lucifugus
ENSCSAVG00000008586	-	99	46.893	ENSNGAG00000013090	Polr3c	99	47.655	Nannospalax_galili
ENSCSAVG00000008586	-	99	42.162	ENSNBRG00000003707	polr3c	99	42.960	Neolamprologus_brichardi
ENSCSAVG00000008586	-	99	46.529	ENSNLEG00000005645	POLR3C	99	47.092	Nomascus_leucogenys
ENSCSAVG00000008586	-	86	50.820	ENSMEUG00000012664	POLR3C	86	50.820	Notamacropus_eugenii
ENSCSAVG00000008586	-	99	45.677	ENSOPRG00000004244	POLR3C	99	45.677	Ochotona_princeps
ENSCSAVG00000008586	-	99	46.729	ENSODEG00000000304	POLR3C	99	46.729	Octodon_degus
ENSCSAVG00000008586	-	99	42.391	ENSONIG00000006370	polr3c	99	42.391	Oreochromis_niloticus
ENSCSAVG00000008586	-	67	33.884	ENSOANG00000000559	-	100	33.884	Ornithorhynchus_anatinus
ENSCSAVG00000008586	-	99	46.429	ENSOCUG00000003050	POLR3C	99	46.429	Oryctolagus_cuniculus
ENSCSAVG00000008586	-	99	43.382	ENSORLG00000010133	polr3c	99	43.382	Oryzias_latipes
ENSCSAVG00000008586	-	99	43.248	ENSORLG00020009245	polr3c	99	43.431	Oryzias_latipes_hni
ENSCSAVG00000008586	-	99	43.223	ENSORLG00015015223	polr3c	99	43.223	Oryzias_latipes_hsok
ENSCSAVG00000008586	-	99	42.831	ENSOMEG00000008558	polr3c	99	42.831	Oryzias_melastigma
ENSCSAVG00000008586	-	99	47.103	ENSOGAG00000000209	POLR3C	99	47.103	Otolemur_garnettii
ENSCSAVG00000008586	-	99	48.037	ENSOARG00000020588	POLR3C	99	48.037	Ovis_aries
ENSCSAVG00000008586	-	99	47.092	ENSPPAG00000025184	POLR3C	99	47.092	Pan_paniscus
ENSCSAVG00000008586	-	99	47.477	ENSPPRG00000008809	POLR3C	99	47.477	Panthera_pardus
ENSCSAVG00000008586	-	99	47.477	ENSPTIG00000009916	POLR3C	99	47.477	Panthera_tigris_altaica
ENSCSAVG00000008586	-	99	47.280	ENSPTRG00000001208	POLR3C	99	47.280	Pan_troglodytes
ENSCSAVG00000008586	-	99	47.655	ENSPANG00000019404	POLR3C	99	47.655	Papio_anubis
ENSCSAVG00000008586	-	99	43.462	ENSPKIG00000014883	polr3c	99	43.462	Paramormyrops_kingsleyae
ENSCSAVG00000008586	-	99	47.932	ENSPSIG00000004694	POLR3C	99	48.308	Pelodiscus_sinensis
ENSCSAVG00000008586	-	99	43.808	ENSPMGG00000007761	polr3c	99	43.808	Periophthalmus_magnuspinnatus
ENSCSAVG00000008586	-	99	45.966	ENSPEMG00000016322	Polr3c	99	46.154	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008586	-	99	43.566	ENSPMAG00000006993	polr3c	99	43.566	Petromyzon_marinus
ENSCSAVG00000008586	-	99	45.763	ENSPCIG00000011954	POLR3C	99	45.763	Phascolarctos_cinereus
ENSCSAVG00000008586	-	99	42.153	ENSPFOG00000014106	polr3c	99	42.336	Poecilia_formosa
ENSCSAVG00000008586	-	99	43.421	ENSPLAG00000018932	polr3c	99	43.258	Poecilia_latipinna
ENSCSAVG00000008586	-	99	42.153	ENSPMEG00000023273	polr3c	99	42.153	Poecilia_mexicana
ENSCSAVG00000008586	-	99	42.514	ENSPREG00000017050	polr3c	99	42.514	Poecilia_reticulata
ENSCSAVG00000008586	-	99	47.467	ENSPPYG00000000936	POLR3C	99	47.467	Pongo_abelii
ENSCSAVG00000008586	-	90	47.619	ENSPCAG00000010501	POLR3C	99	47.826	Procavia_capensis
ENSCSAVG00000008586	-	89	52.459	ENSPCOG00000024937	POLR3C	99	52.459	Propithecus_coquereli
ENSCSAVG00000008586	-	99	47.092	ENSPVAG00000014483	POLR3C	99	47.170	Pteropus_vampyrus
ENSCSAVG00000008586	-	99	42.960	ENSPNYG00000004504	polr3c	99	42.960	Pundamilia_nyererei
ENSCSAVG00000008586	-	98	43.542	ENSPNAG00000018675	polr3c	99	43.327	Pygocentrus_nattereri
ENSCSAVG00000008586	-	99	46.904	ENSRNOG00000033560	Polr3c	99	47.664	Rattus_norvegicus
ENSCSAVG00000008586	-	99	47.842	ENSRBIG00000035432	POLR3C	99	47.842	Rhinopithecus_bieti
ENSCSAVG00000008586	-	99	47.842	ENSRROG00000039959	POLR3C	99	47.842	Rhinopithecus_roxellana
ENSCSAVG00000008586	-	90	45.851	ENSSBOG00000028429	POLR3C	98	45.851	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008586	-	99	45.763	ENSSHAG00000018565	POLR3C	99	45.763	Sarcophilus_harrisii
ENSCSAVG00000008586	-	99	44.963	ENSSFOG00015021863	polr3c	99	45.336	Scleropages_formosus
ENSCSAVG00000008586	-	99	44.156	ENSSMAG00000016000	polr3c	99	43.970	Scophthalmus_maximus
ENSCSAVG00000008586	-	99	44.569	ENSSDUG00000006590	polr3c	99	44.569	Seriola_dumerili
ENSCSAVG00000008586	-	99	44.424	ENSSLDG00000015614	polr3c	99	44.424	Seriola_lalandi_dorsalis
ENSCSAVG00000008586	-	62	50.453	ENSSARG00000014380	POLR3C	98	50.453	Sorex_araneus
ENSCSAVG00000008586	-	99	48.218	ENSSPUG00000001834	POLR3C	99	48.218	Sphenodon_punctatus
ENSCSAVG00000008586	-	99	43.820	ENSSPAG00000022520	polr3c	99	43.820	Stegastes_partitus
ENSCSAVG00000008586	-	99	47.290	ENSSSCG00000006691	POLR3C	99	47.290	Sus_scrofa
ENSCSAVG00000008586	-	99	43.527	ENSTGUG00000016941	POLR3C	99	43.527	Taeniopygia_guttata
ENSCSAVG00000008586	-	99	42.593	ENSTRUG00000010726	polr3c	99	42.593	Takifugu_rubripes
ENSCSAVG00000008586	-	99	44.465	ENSTNIG00000019501	polr3c	99	44.362	Tetraodon_nigroviridis
ENSCSAVG00000008586	-	73	47.949	ENSTBEG00000015610	POLR3C	97	48.205	Tupaia_belangeri
ENSCSAVG00000008586	-	99	47.477	ENSUAMG00000021906	POLR3C	99	47.477	Ursus_americanus
ENSCSAVG00000008586	-	99	47.477	ENSUMAG00000010180	POLR3C	99	47.477	Ursus_maritimus
ENSCSAVG00000008586	-	99	47.290	ENSVVUG00000007421	POLR3C	99	47.290	Vulpes_vulpes
ENSCSAVG00000008586	-	99	39.700	ENSXCOG00000019524	polr3c	99	39.700	Xiphophorus_couchianus
ENSCSAVG00000008586	-	99	42.413	ENSXMAG00000016215	polr3c	99	42.413	Xiphophorus_maculatus