EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000008596 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
1162 bases
Position
chrreftig_7:2775665-2776826
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000014715LSMPF01423.229.4e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000014883-813-ENSCSAVP00000014715125 (aa)-H2ZAV0
Gene Model
Click here to download ENSCSAVG00000008596's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008596's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000008596-8132.673ENSCSAVG00000004708-5533.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000008596-7093.182ENSG00000130520LSM49973.529Homo_sapiens
ENSCSAVG00000008596-7887.629ENSAPOG00000005643lsm45793.023Acanthochromis_polyacanthus
ENSCSAVG00000008596-7093.103ENSAMEG00000011162LSM45991.860Ailuropoda_melanoleuca
ENSCSAVG00000008596-7887.629ENSAOCG00000006414lsm45893.023Amphiprion_ocellaris
ENSCSAVG00000008596-7887.629ENSAPEG00000006238lsm45893.023Amphiprion_percula
ENSCSAVG00000008596-7887.629ENSATEG00000016559lsm45793.023Anabas_testudineus
ENSCSAVG00000008596-7093.182ENSANAG00000034659LSM46293.023Aotus_nancymaae
ENSCSAVG00000008596-7887.629ENSACLG00000022738lsm45993.023Astatotilapia_calliptera
ENSCSAVG00000008596-7492.391ENSAMXG00000016932lsm46193.023Astyanax_mexicanus
ENSCSAVG00000008596-7093.182ENSBTAG00000008578LSM46293.023Bos_taurus
ENSCSAVG00000008596-6674.390WBGene00003078lsm-46774.390Caenorhabditis_elegans
ENSCSAVG00000008596-7093.182ENSCJAG00000014171LSM46293.023Callithrix_jacchus
ENSCSAVG00000008596-7093.182ENSCAFG00000014900LSM45693.023Canis_familiaris
ENSCSAVG00000008596-7093.182ENSCAFG00020012137LSM46293.023Canis_lupus_dingo
ENSCSAVG00000008596-7093.103ENSCHIG00000010928LSM45692.941Capra_hircus
ENSCSAVG00000008596-7093.182ENSTSYG00000030906LSM46293.023Carlito_syrichta
ENSCSAVG00000008596-7093.182ENSCAPG00000014140LSM46293.023Cavia_aperea
ENSCSAVG00000008596-7093.182ENSCPOG00000024117LSM46293.023Cavia_porcellus
ENSCSAVG00000008596-7093.182ENSCCAG00000036308LSM46293.023Cebus_capucinus
ENSCSAVG00000008596-7093.182ENSCATG00000029311LSM49773.134Cercocebus_atys
ENSCSAVG00000008596-7093.182ENSCLAG00000010828LSM46293.023Chinchilla_lanigera
ENSCSAVG00000008596-7093.182ENSCSAG00000005370LSM46293.023Chlorocebus_sabaeus
ENSCSAVG00000008596-7093.182ENSCPBG00000012925LSM46293.023Chrysemys_picta_bellii
ENSCSAVG00000008596-10085.827ENSCING00000007519-6897.674Ciona_intestinalis
ENSCSAVG00000008596-7093.182ENSCANG00000043686LSM49771.014Colobus_angolensis_palliatus
ENSCSAVG00000008596-7092.045ENSCGRG00001014436Lsm46093.976Cricetulus_griseus_chok1gshd
ENSCSAVG00000008596-7091.954ENSCGRG00000009398Lsm46093.902Cricetulus_griseus_crigri
ENSCSAVG00000008596-7887.629ENSCSEG00000016127lsm46193.023Cynoglossus_semilaevis
ENSCSAVG00000008596-6687.805ENSCVAG00000021828lsm45593.056Cyprinodon_variegatus
ENSCSAVG00000008596-7888.660ENSCVAG00000010601lsm46094.186Cyprinodon_variegatus
ENSCSAVG00000008596-7689.474ENSDARG00000023852lsm46093.023Danio_rerio
ENSCSAVG00000008596-7093.182ENSDORG00000024225Lsm46293.023Dipodomys_ordii
ENSCSAVG00000008596-7881.633FBgn0032240CG177685688.372Drosophila_melanogaster
ENSCSAVG00000008596-5891.781ENSETEG00000007762-5791.549Echinops_telfairi
ENSCSAVG00000008596-6093.333ENSEBUG00000003639-5388.750Eptatretus_burgeri
ENSCSAVG00000008596-9971.654ENSELUG00000012821lsm49674.803Esox_lucius
ENSCSAVG00000008596-7093.182ENSFCAG00000040580LSM46293.023Felis_catus
ENSCSAVG00000008596-7093.103ENSFALG00000009478LSM46291.860Ficedula_albicollis
ENSCSAVG00000008596-7093.103ENSFDAG00000010124LSM46292.941Fukomys_damarensis
ENSCSAVG00000008596-7392.308ENSGMOG00000007729lsm47182.692Gadus_morhua
ENSCSAVG00000008596-7093.182ENSGALG00000003385LSM46293.023Gallus_gallus
ENSCSAVG00000008596-9178.226ENSGAFG00000004903lsm45490.141Gambusia_affinis
ENSCSAVG00000008596-7492.473ENSGACG00000008140lsm45793.023Gasterosteus_aculeatus
ENSCSAVG00000008596-7093.182ENSGAGG00000017812LSM46293.023Gopherus_agassizii
ENSCSAVG00000008596-7093.182ENSGGOG00000012914-9773.134Gorilla_gorilla
ENSCSAVG00000008596-7093.182ENSHGLG00000006568LSM46293.023Heterocephalus_glaber_female
ENSCSAVG00000008596-7492.391ENSHGLG00100007894LSM49293.023Heterocephalus_glaber_male
ENSCSAVG00000008596-7887.629ENSHCOG00000008819lsm46193.023Hippocampus_comes
ENSCSAVG00000008596-7492.391ENSIPUG00000005368Lsm46193.023Ictalurus_punctatus
ENSCSAVG00000008596-7093.182ENSSTOG00000016494LSM46293.023Ictidomys_tridecemlineatus
ENSCSAVG00000008596-7092.045ENSJJAG00000017420Lsm46291.860Jaculus_jaculus
ENSCSAVG00000008596-6991.860ENSKMAG00000005073lsm46091.860Kryptolebias_marmoratus
ENSCSAVG00000008596-7887.629ENSLBEG00000027930lsm45893.023Labrus_bergylta
ENSCSAVG00000008596-7093.182ENSLACG00000015861LSM46193.023Latimeria_chalumnae
ENSCSAVG00000008596-7493.478ENSLOCG00000002025lsm46194.186Lepisosteus_oculatus
ENSCSAVG00000008596-7091.954ENSLAFG00000017459LSM46290.698Loxodonta_africana
ENSCSAVG00000008596-7093.182ENSMFAG00000031194LSM49771.014Macaca_fascicularis
ENSCSAVG00000008596-7093.182ENSMMUG00000004405LSM46293.023Macaca_mulatta
ENSCSAVG00000008596-7093.182ENSMNEG00000042899LSM49771.014Macaca_nemestrina
ENSCSAVG00000008596-7093.182ENSMLEG00000027948LSM49773.134Mandrillus_leucophaeus
ENSCSAVG00000008596-9770.290ENSMAMG00000006190lsm46193.023Mastacembelus_armatus
ENSCSAVG00000008596-7887.629ENSMZEG00005016420lsm45993.023Maylandia_zebra
ENSCSAVG00000008596-9973.643ENSMGAG00000004976LSM46291.860Meleagris_gallopavo
ENSCSAVG00000008596-7492.391ENSMICG00000000222LSM46293.023Microcebus_murinus
ENSCSAVG00000008596-7092.045ENSMOCG00000020861Lsm46093.976Microtus_ochrogaster
ENSCSAVG00000008596-5893.151ENSMODG00000015044-5792.958Monodelphis_domestica
ENSCSAVG00000008596-7984.848ENSMALG00000018159lsm46091.860Monopterus_albus
ENSCSAVG00000008596-7092.045MGP_CAROLIEiJ_G0031158Lsm46093.976Mus_caroli
ENSCSAVG00000008596-7092.045ENSMUSG00000031848Lsm48086.747Mus_musculus
ENSCSAVG00000008596-7092.045MGP_PahariEiJ_G0021623Lsm46093.976Mus_pahari
ENSCSAVG00000008596-7092.045MGP_SPRETEiJ_G0032276Lsm46093.976Mus_spretus
ENSCSAVG00000008596-7093.182ENSMPUG00000015589LSM46293.023Mustela_putorius_furo
ENSCSAVG00000008596-7093.103ENSMLUG00000004010LSM46291.860Myotis_lucifugus
ENSCSAVG00000008596-7092.045ENSNGAG00000008644Lsm46291.860Nannospalax_galili
ENSCSAVG00000008596-7885.714ENSNBRG00000022150lsm45292.941Neolamprologus_brichardi
ENSCSAVG00000008596-5890.411ENSMEUG00000013229LSM45790.141Notamacropus_eugenii
ENSCSAVG00000008596-6292.208ENSOPRG00000005575LSM46092.958Ochotona_princeps
ENSCSAVG00000008596-7093.182ENSODEG00000020549-6293.023Octodon_degus
ENSCSAVG00000008596-7082.955ENSODEG00000004519-5888.462Octodon_degus
ENSCSAVG00000008596-7887.629ENSONIG00000012724lsm45993.023Oreochromis_niloticus
ENSCSAVG00000008596-7087.912ENSOANG00000007434LSM47787.640Ornithorhynchus_anatinus
ENSCSAVG00000008596-9874.436ENSORLG00000008391lsm46091.860Oryzias_latipes
ENSCSAVG00000008596-9177.419ENSORLG00020014829lsm46091.860Oryzias_latipes_hni
ENSCSAVG00000008596-9177.419ENSORLG00015010205lsm46091.860Oryzias_latipes_hsok
ENSCSAVG00000008596-9475.000ENSOMEG00000003606lsm46091.860Oryzias_melastigma
ENSCSAVG00000008596-7392.308ENSOGAG00000027992LSM45991.860Otolemur_garnettii
ENSCSAVG00000008596-7093.103ENSOARG00000012553LSM45992.941Ovis_aries
ENSCSAVG00000008596-7093.182ENSPPAG00000044045-6293.023Pan_paniscus
ENSCSAVG00000008596-7093.182ENSPPRG00000018264LSM46293.023Panthera_pardus
ENSCSAVG00000008596-7093.103ENSPTIG00000006306LSM46292.941Panthera_tigris_altaica
ENSCSAVG00000008596-7093.182ENSPTRG00000031470LSM46293.023Pan_troglodytes
ENSCSAVG00000008596-7093.182ENSPANG00000014399LSM49773.134Papio_anubis
ENSCSAVG00000008596-7492.391ENSPKIG00000006154lsm46193.023Paramormyrops_kingsleyae
ENSCSAVG00000008596-7093.103ENSPSIG00000012358LSM46292.941Pelodiscus_sinensis
ENSCSAVG00000008596-7092.045ENSPEMG00000001358Lsm46093.976Peromyscus_maniculatus_bairdii
ENSCSAVG00000008596-8782.569ENSPLAG00000016267lsm46093.023Poecilia_latipinna
ENSCSAVG00000008596-9080.672ENSPMEG00000016378lsm46192.941Poecilia_mexicana
ENSCSAVG00000008596-7093.182ENSPPYG00000009736LSM46293.023Pongo_abelii
ENSCSAVG00000008596-5891.781ENSPCAG00000008513LSM45791.549Procavia_capensis
ENSCSAVG00000008596-7492.391ENSPCOG00000019837LSM46293.023Propithecus_coquereli
ENSCSAVG00000008596-7093.182ENSPVAG00000015383LSM46293.023Pteropus_vampyrus
ENSCSAVG00000008596-7887.629ENSPNYG00000016794lsm45993.023Pundamilia_nyererei
ENSCSAVG00000008596-7392.308ENSPNAG00000016598lsm46392.941Pygocentrus_nattereri
ENSCSAVG00000008596-7092.045ENSRNOG00000019572Lsm46093.976Rattus_norvegicus
ENSCSAVG00000008596-7093.182ENSRBIG00000024717LSM49772.464Rhinopithecus_bieti
ENSCSAVG00000008596-7093.182ENSRROG00000045706LSM49772.464Rhinopithecus_roxellana
ENSCSAVG00000008596-5993.243ENSSBOG00000022455LSM45893.056Saimiri_boliviensis_boliviensis
ENSCSAVG00000008596-7093.182ENSSHAG00000011559LSM46293.023Sarcophilus_harrisii
ENSCSAVG00000008596-7492.391ENSSFOG00015021067lsm46193.023Scleropages_formosus
ENSCSAVG00000008596-7985.859ENSSMAG00000021020lsm45793.023Scophthalmus_maximus
ENSCSAVG00000008596-7887.629ENSSDUG00000009588lsm45193.023Seriola_dumerili
ENSCSAVG00000008596-7887.629ENSSLDG00000006827lsm45193.023Seriola_lalandi_dorsalis
ENSCSAVG00000008596-7093.103ENSSPUG00000010166LSM45592.941Sphenodon_punctatus
ENSCSAVG00000008596-7887.629ENSSPAG00000011615lsm45793.023Stegastes_partitus
ENSCSAVG00000008596-7093.182ENSSSCG00000034314LSM46293.023Sus_scrofa
ENSCSAVG00000008596-9873.684ENSTRUG00000021737lsm46091.860Takifugu_rubripes
ENSCSAVG00000008596-9873.881ENSTNIG00000010191lsm46093.023Tetraodon_nigroviridis
ENSCSAVG00000008596-7093.182ENSUAMG00000000665LSM47193.023Ursus_americanus
ENSCSAVG00000008596-7093.182ENSUMAG00000009013LSM46293.023Ursus_maritimus
ENSCSAVG00000008596-7493.478ENSXETG00000024933lsm46294.186Xenopus_tropicalis

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