EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 19288 bases
Position: chrreftig_156:280614-299901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014747	IBN_N	PF03810.19	9.9e-12	1	1
ENSCSAVP00000014748	IBN_N	PF03810.19	1.2e-11	1	1
ENSCSAVP00000014746	IBN_N	PF03810.19	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014919	-	2642	-	ENSCSAVP00000014747	867 (aa)	-	H2ZAY2
ENSCSAVT00000014918	-	2794	-	ENSCSAVP00000014746	906 (aa)	-	H2ZAY1
ENSCSAVT00000014920	-	3178	-	ENSCSAVP00000014748	882 (aa)	-	H2ZAY3

Gene Model

Click here to download ENSCSAVG00000008624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008624	-	100	62.147	ENSG00000108424	KPNB1	100	63.378	Homo_sapiens
ENSCSAVG00000008624	-	100	62.599	ENSAPOG00000020572	kpnb1	100	62.599	Acanthochromis_polyacanthus
ENSCSAVG00000008624	-	96	62.588	ENSAMEG00000004613	KPNB1	99	62.588	Ailuropoda_melanoleuca
ENSCSAVG00000008624	-	98	62.890	ENSACIG00000023130	kpnb1	99	62.890	Amphilophus_citrinellus
ENSCSAVG00000008624	-	100	62.599	ENSAOCG00000007048	kpnb1	100	62.599	Amphiprion_ocellaris
ENSCSAVG00000008624	-	100	62.599	ENSAPEG00000008270	kpnb1	100	62.599	Amphiprion_percula
ENSCSAVG00000008624	-	100	62.260	ENSATEG00000015139	kpnb1	100	62.260	Anabas_testudineus
ENSCSAVG00000008624	-	98	61.021	ENSAPLG00000010177	KPNB1	98	61.021	Anas_platyrhynchos
ENSCSAVG00000008624	-	100	62.938	ENSACAG00000007097	KPNB1	100	62.938	Anolis_carolinensis
ENSCSAVG00000008624	-	100	60.000	ENSANAG00000024932	-	99	60.000	Aotus_nancymaae
ENSCSAVG00000008624	-	100	62.373	ENSACLG00000015070	kpnb1	100	62.373	Astatotilapia_calliptera
ENSCSAVG00000008624	-	100	62.938	ENSAMXG00000041903	kpnb1	100	62.938	Astyanax_mexicanus
ENSCSAVG00000008624	-	100	62.260	ENSBTAG00000006586	KPNB1	100	62.260	Bos_taurus
ENSCSAVG00000008624	-	99	41.932	WBGene00002075	imb-1	98	41.932	Caenorhabditis_elegans
ENSCSAVG00000008624	-	100	62.147	ENSCJAG00000007834	KPNB1	100	62.147	Callithrix_jacchus
ENSCSAVG00000008624	-	100	62.260	ENSCAFG00000016678	KPNB1	100	62.260	Canis_familiaris
ENSCSAVG00000008624	-	100	62.260	ENSCAFG00020023205	KPNB1	100	62.260	Canis_lupus_dingo
ENSCSAVG00000008624	-	100	62.260	ENSCHIG00000014896	KPNB1	100	62.260	Capra_hircus
ENSCSAVG00000008624	-	100	60.678	ENSTSYG00000014472	KPNB1	99	60.678	Carlito_syrichta
ENSCSAVG00000008624	-	96	62.588	ENSCAPG00000014185	KPNB1	99	62.588	Cavia_aperea
ENSCSAVG00000008624	-	100	62.387	ENSCPOG00000006566	KPNB1	100	62.387	Cavia_porcellus
ENSCSAVG00000008624	-	100	57.416	ENSCCAG00000029263	-	99	57.416	Cebus_capucinus
ENSCSAVG00000008624	-	100	56.294	ENSCCAG00000018551	-	100	56.294	Cebus_capucinus
ENSCSAVG00000008624	-	100	62.147	ENSCATG00000037124	KPNB1	100	62.147	Cercocebus_atys
ENSCSAVG00000008624	-	100	62.500	ENSCLAG00000017091	KPNB1	100	62.500	Chinchilla_lanigera
ENSCSAVG00000008624	-	100	62.147	ENSCSAG00000002605	KPNB1	100	62.147	Chlorocebus_sabaeus
ENSCSAVG00000008624	-	72	68.571	ENSCHOG00000010604	KPNB1	71	68.571	Choloepus_hoffmanni
ENSCSAVG00000008624	-	99	62.959	ENSCPBG00000027423	KPNB1	95	62.284	Chrysemys_picta_bellii
ENSCSAVG00000008624	-	99	78.677	ENSCING00000004639	-	99	78.677	Ciona_intestinalis
ENSCSAVG00000008624	-	96	60.958	ENSCANG00000013489	KPNB1	99	60.958	Colobus_angolensis_palliatus
ENSCSAVG00000008624	-	100	62.260	ENSCGRG00001016042	Kpnb1	100	62.260	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008624	-	96	62.588	ENSCGRG00000013910	Kpnb1	99	62.588	Cricetulus_griseus_crigri
ENSCSAVG00000008624	-	97	61.789	ENSCSEG00000007991	kpnb1	100	61.789	Cynoglossus_semilaevis
ENSCSAVG00000008624	-	100	62.486	ENSDARG00000104889	kpnb1	100	62.486	Danio_rerio
ENSCSAVG00000008624	-	99	51.299	FBgn0262743	Fs(2)Ket	99	51.299	Drosophila_melanogaster
ENSCSAVG00000008624	-	99	60.870	ENSEBUG00000013869	kpnb1	99	60.870	Eptatretus_burgeri
ENSCSAVG00000008624	-	100	62.260	ENSEASG00005000805	KPNB1	100	62.260	Equus_asinus_asinus
ENSCSAVG00000008624	-	100	62.260	ENSECAG00000014560	KPNB1	100	62.260	Equus_caballus
ENSCSAVG00000008624	-	85	60.759	ENSEEUG00000005046	KPNB1	88	60.759	Erinaceus_europaeus
ENSCSAVG00000008624	-	100	62.260	ENSELUG00000015847	kpnb1	100	62.260	Esox_lucius
ENSCSAVG00000008624	-	100	62.260	ENSFCAG00000023994	KPNB1	100	62.260	Felis_catus
ENSCSAVG00000008624	-	96	62.706	ENSFDAG00000019923	KPNB1	99	62.706	Fukomys_damarensis
ENSCSAVG00000008624	-	100	62.147	ENSFHEG00000020199	kpnb1	100	62.147	Fundulus_heteroclitus
ENSCSAVG00000008624	-	100	59.209	ENSGMOG00000011607	kpnb1	99	59.209	Gadus_morhua
ENSCSAVG00000008624	-	100	62.260	ENSGALG00000036962	KPNB1	100	62.260	Gallus_gallus
ENSCSAVG00000008624	-	100	62.260	ENSGAFG00000000783	kpnb1	100	62.260	Gambusia_affinis
ENSCSAVG00000008624	-	100	59.730	ENSGACG00000014765	kpnb1	100	59.730	Gasterosteus_aculeatus
ENSCSAVG00000008624	-	96	62.941	ENSGAGG00000023737	KPNB1	92	62.941	Gopherus_agassizii
ENSCSAVG00000008624	-	100	62.147	ENSGGOG00000008089	KPNB1	100	62.147	Gorilla_gorilla
ENSCSAVG00000008624	-	100	62.373	ENSHBUG00000016826	kpnb1	100	62.373	Haplochromis_burtoni
ENSCSAVG00000008624	-	100	62.486	ENSHGLG00000014138	KPNB1	100	62.486	Heterocephalus_glaber_female
ENSCSAVG00000008624	-	96	62.824	ENSHGLG00100006572	KPNB1	99	62.824	Heterocephalus_glaber_male
ENSCSAVG00000008624	-	100	60.791	ENSHCOG00000002084	kpnb1	100	60.791	Hippocampus_comes
ENSCSAVG00000008624	-	99	60.069	ENSIPUG00000012402	kpnb1	96	59.657	Ictalurus_punctatus
ENSCSAVG00000008624	-	100	62.147	ENSSTOG00000007896	KPNB1	100	62.147	Ictidomys_tridecemlineatus
ENSCSAVG00000008624	-	100	61.921	ENSJJAG00000010909	Kpnb1	100	61.921	Jaculus_jaculus
ENSCSAVG00000008624	-	100	62.147	ENSKMAG00000001547	kpnb1	100	62.147	Kryptolebias_marmoratus
ENSCSAVG00000008624	-	99	61.872	ENSLBEG00000025794	kpnb1	99	61.458	Labrus_bergylta
ENSCSAVG00000008624	-	89	64.202	ENSLACG00000017620	KPNB1	99	64.202	Latimeria_chalumnae
ENSCSAVG00000008624	-	100	62.373	ENSLOCG00000013753	kpnb1	100	63.051	Lepisosteus_oculatus
ENSCSAVG00000008624	-	100	58.989	ENSLAFG00000001328	KPNB1	100	58.989	Loxodonta_africana
ENSCSAVG00000008624	-	96	62.471	ENSMFAG00000030197	KPNB1	99	62.471	Macaca_fascicularis
ENSCSAVG00000008624	-	99	61.574	ENSMMUG00000019760	KPNB1	99	61.574	Macaca_mulatta
ENSCSAVG00000008624	-	100	62.147	ENSMNEG00000040927	KPNB1	100	62.147	Macaca_nemestrina
ENSCSAVG00000008624	-	96	62.471	ENSMLEG00000038185	KPNB1	96	62.471	Mandrillus_leucophaeus
ENSCSAVG00000008624	-	100	62.599	ENSMAMG00000011036	kpnb1	100	62.599	Mastacembelus_armatus
ENSCSAVG00000008624	-	100	62.373	ENSMZEG00005004564	kpnb1	100	62.373	Maylandia_zebra
ENSCSAVG00000008624	-	56	60.124	ENSMGAG00000002770	-	99	60.124	Meleagris_gallopavo
ENSCSAVG00000008624	-	100	62.260	ENSMAUG00000006211	Kpnb1	100	62.260	Mesocricetus_auratus
ENSCSAVG00000008624	-	100	62.147	ENSMICG00000012059	KPNB1	84	62.147	Microcebus_murinus
ENSCSAVG00000008624	-	100	62.260	ENSMOCG00000003683	Kpnb1	100	62.260	Microtus_ochrogaster
ENSCSAVG00000008624	-	100	62.712	ENSMODG00000012505	KPNB1	100	62.712	Monodelphis_domestica
ENSCSAVG00000008624	-	100	62.373	ENSMALG00000000863	kpnb1	100	62.373	Monopterus_albus
ENSCSAVG00000008624	-	94	62.545	MGP_CAROLIEiJ_G0017050	Kpnb1	100	62.545	Mus_caroli
ENSCSAVG00000008624	-	100	62.260	ENSMUSG00000001440	Kpnb1	100	62.260	Mus_musculus
ENSCSAVG00000008624	-	100	61.808	ENSMPUG00000015220	KPNB1	100	61.808	Mustela_putorius_furo
ENSCSAVG00000008624	-	100	58.625	ENSMLUG00000014522	KPNB1	100	58.625	Myotis_lucifugus
ENSCSAVG00000008624	-	96	62.353	ENSNGAG00000017610	Kpnb1	99	62.353	Nannospalax_galili
ENSCSAVG00000008624	-	100	62.373	ENSNBRG00000019305	kpnb1	100	62.373	Neolamprologus_brichardi
ENSCSAVG00000008624	-	100	62.147	ENSNLEG00000001446	KPNB1	100	62.147	Nomascus_leucogenys
ENSCSAVG00000008624	-	100	58.983	ENSMEUG00000014284	KPNB1	100	58.983	Notamacropus_eugenii
ENSCSAVG00000008624	-	100	62.500	ENSODEG00000017287	KPNB1	100	62.500	Octodon_degus
ENSCSAVG00000008624	-	100	62.486	ENSONIG00000009269	kpnb1	100	62.486	Oreochromis_niloticus
ENSCSAVG00000008624	-	100	62.373	ENSOCUG00000015425	KPNB1	100	62.373	Oryctolagus_cuniculus
ENSCSAVG00000008624	-	100	62.260	ENSORLG00000019936	kpnb1	100	62.260	Oryzias_latipes
ENSCSAVG00000008624	-	100	62.260	ENSORLG00020021181	kpnb1	100	62.260	Oryzias_latipes_hni
ENSCSAVG00000008624	-	100	62.147	ENSORLG00015012177	kpnb1	100	62.147	Oryzias_latipes_hsok
ENSCSAVG00000008624	-	100	62.373	ENSOMEG00000021022	kpnb1	100	62.373	Oryzias_melastigma
ENSCSAVG00000008624	-	100	62.147	ENSOGAG00000006153	KPNB1	100	62.147	Otolemur_garnettii
ENSCSAVG00000008624	-	96	62.588	ENSOARG00000008469	KPNB1	97	62.588	Ovis_aries
ENSCSAVG00000008624	-	100	62.147	ENSPPAG00000028842	KPNB1	100	62.147	Pan_paniscus
ENSCSAVG00000008624	-	96	62.588	ENSPPRG00000022879	KPNB1	97	62.588	Panthera_pardus
ENSCSAVG00000008624	-	96	62.588	ENSPTIG00000006870	KPNB1	97	62.588	Panthera_tigris_altaica
ENSCSAVG00000008624	-	100	62.147	ENSPTRG00000009333	KPNB1	100	62.147	Pan_troglodytes
ENSCSAVG00000008624	-	100	62.147	ENSPANG00000022099	KPNB1	100	62.147	Papio_anubis
ENSCSAVG00000008624	-	100	63.051	ENSPKIG00000017563	kpnb1	100	63.051	Paramormyrops_kingsleyae
ENSCSAVG00000008624	-	96	63.294	ENSPSIG00000009775	KPNB1	99	63.294	Pelodiscus_sinensis
ENSCSAVG00000008624	-	100	61.808	ENSPMGG00000001041	kpnb1	93	62.641	Periophthalmus_magnuspinnatus
ENSCSAVG00000008624	-	100	62.260	ENSPEMG00000017783	Kpnb1	100	62.260	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008624	-	99	61.218	ENSPMAG00000007117	kpnb1	99	61.218	Petromyzon_marinus
ENSCSAVG00000008624	-	100	62.599	ENSPCIG00000001034	KPNB1	100	62.599	Phascolarctos_cinereus
ENSCSAVG00000008624	-	100	62.260	ENSPFOG00000009014	kpnb1	100	62.260	Poecilia_formosa
ENSCSAVG00000008624	-	100	62.260	ENSPLAG00000010922	kpnb1	100	62.260	Poecilia_latipinna
ENSCSAVG00000008624	-	100	62.260	ENSPREG00000012268	kpnb1	100	62.260	Poecilia_reticulata
ENSCSAVG00000008624	-	100	61.921	ENSPPYG00000025935	KPNB1	100	61.921	Pongo_abelii
ENSCSAVG00000008624	-	69	75.000	ENSPCAG00000002526	KPNB1	70	75.000	Procavia_capensis
ENSCSAVG00000008624	-	100	62.147	ENSPCOG00000026259	KPNB1	100	62.147	Propithecus_coquereli
ENSCSAVG00000008624	-	100	61.808	ENSPVAG00000004910	KPNB1	100	61.808	Pteropus_vampyrus
ENSCSAVG00000008624	-	100	59.784	ENSPNYG00000017703	kpnb1	97	63.556	Pundamilia_nyererei
ENSCSAVG00000008624	-	99	57.305	ENSPNAG00000024047	kpnb1	99	56.965	Pygocentrus_nattereri
ENSCSAVG00000008624	-	100	62.260	ENSRNOG00000009275	Kpnb1	100	62.260	Rattus_norvegicus
ENSCSAVG00000008624	-	100	62.034	ENSRBIG00000002254	KPNB1	99	62.034	Rhinopithecus_bieti
ENSCSAVG00000008624	-	99	62.171	ENSRROG00000030419	KPNB1	99	62.171	Rhinopithecus_roxellana
ENSCSAVG00000008624	-	99	31.271	YLR347C	KAP95	99	31.271	Saccharomyces_cerevisiae
ENSCSAVG00000008624	-	100	62.147	ENSSBOG00000030025	KPNB1	94	62.147	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008624	-	96	62.807	ENSSHAG00000018214	KPNB1	100	62.807	Sarcophilus_harrisii
ENSCSAVG00000008624	-	100	62.712	ENSSFOG00015020000	kpnb1	100	62.712	Scleropages_formosus
ENSCSAVG00000008624	-	100	62.599	ENSSDUG00000016218	kpnb1	100	62.599	Seriola_dumerili
ENSCSAVG00000008624	-	98	62.933	ENSSLDG00000021549	kpnb1	97	62.933	Seriola_lalandi_dorsalis
ENSCSAVG00000008624	-	100	62.373	ENSSPUG00000017799	KPNB1	100	62.373	Sphenodon_punctatus
ENSCSAVG00000008624	-	100	62.373	ENSSPAG00000019346	kpnb1	100	62.373	Stegastes_partitus
ENSCSAVG00000008624	-	100	62.260	ENSSSCG00000017514	KPNB1	100	62.260	Sus_scrofa
ENSCSAVG00000008624	-	96	58.706	ENSTGUG00000003387	KPNB1	99	58.706	Taeniopygia_guttata
ENSCSAVG00000008624	-	100	62.034	ENSTRUG00000000542	kpnb1	100	62.034	Takifugu_rubripes
ENSCSAVG00000008624	-	100	61.695	ENSTNIG00000006494	kpnb1	100	61.695	Tetraodon_nigroviridis
ENSCSAVG00000008624	-	96	62.588	ENSTTRG00000004682	KPNB1	99	62.588	Tursiops_truncatus
ENSCSAVG00000008624	-	100	62.260	ENSUAMG00000025344	KPNB1	99	62.260	Ursus_americanus
ENSCSAVG00000008624	-	98	61.724	ENSUMAG00000016471	KPNB1	98	61.724	Ursus_maritimus
ENSCSAVG00000008624	-	100	52.316	ENSVPAG00000003675	KPNB1	100	52.316	Vicugna_pacos
ENSCSAVG00000008624	-	100	62.260	ENSVVUG00000003085	KPNB1	100	62.260	Vulpes_vulpes
ENSCSAVG00000008624	-	100	62.260	ENSXETG00000014717	kpnb1	100	62.260	Xenopus_tropicalis
ENSCSAVG00000008624	-	100	62.147	ENSXMAG00000018792	kpnb1	100	62.147	Xiphophorus_maculatus