EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008659 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4809 bases
Position: chrreftig_7:2834813-2839621
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014805	Bystin	PF05291.11	2.8e-128	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014978	-	1559	-	ENSCSAVP00000014805	438 (aa)	-	H2ZB40

Gene Model

Click here to download ENSCSAVG00000008659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008659	-	96	54.206	ENSG00000112578	BYSL	91	65.663	Homo_sapiens
ENSCSAVG00000008659	-	94	58.554	ENSAPOG00000017917	bysl	99	55.936	Acanthochromis_polyacanthus
ENSCSAVG00000008659	-	96	54.206	ENSAMEG00000013033	BYSL	97	54.206	Ailuropoda_melanoleuca
ENSCSAVG00000008659	-	68	68.000	ENSACIG00000019537	bysl	98	68.000	Amphilophus_citrinellus
ENSCSAVG00000008659	-	94	58.795	ENSAOCG00000001625	bysl	99	55.936	Amphiprion_ocellaris
ENSCSAVG00000008659	-	94	58.795	ENSAPEG00000014739	bysl	99	55.936	Amphiprion_percula
ENSCSAVG00000008659	-	100	54.525	ENSATEG00000006316	bysl	99	54.318	Anabas_testudineus
ENSCSAVG00000008659	-	74	63.333	ENSAPLG00000008733	BYSL	98	63.333	Anas_platyrhynchos
ENSCSAVG00000008659	-	87	61.399	ENSACAG00000003079	BYSL	81	59.949	Anolis_carolinensis
ENSCSAVG00000008659	-	96	54.907	ENSANAG00000036138	BYSL	97	54.907	Aotus_nancymaae
ENSCSAVG00000008659	-	99	55.378	ENSACLG00000022434	bysl	99	54.920	Astatotilapia_calliptera
ENSCSAVG00000008659	-	94	58.313	ENSAMXG00000008799	bysl	94	57.831	Astyanax_mexicanus
ENSCSAVG00000008659	-	97	54.943	ENSBTAG00000010101	BYSL	99	53.811	Bos_taurus
ENSCSAVG00000008659	-	88	44.275	WBGene00000276	byn-1	88	44.275	Caenorhabditis_elegans
ENSCSAVG00000008659	-	96	54.673	ENSCJAG00000004266	BYSL	97	54.673	Callithrix_jacchus
ENSCSAVG00000008659	-	98	55.862	ENSCAFG00000001614	BYSL	98	55.862	Canis_familiaris
ENSCSAVG00000008659	-	98	55.862	ENSCAFG00020008426	BYSL	98	55.862	Canis_lupus_dingo
ENSCSAVG00000008659	-	98	54.587	ENSCHIG00000017590	BYSL	71	53.456	Capra_hircus
ENSCSAVG00000008659	-	96	54.312	ENSTSYG00000029904	BYSL	97	54.312	Carlito_syrichta
ENSCSAVG00000008659	-	67	65.986	ENSCAPG00000015987	BYSL	99	65.986	Cavia_aperea
ENSCSAVG00000008659	-	97	53.917	ENSCPOG00000004403	BYSL	99	53.917	Cavia_porcellus
ENSCSAVG00000008659	-	96	55.140	ENSCCAG00000036583	BYSL	97	55.140	Cebus_capucinus
ENSCSAVG00000008659	-	98	53.456	ENSCATG00000039266	BYSL	98	53.456	Cercocebus_atys
ENSCSAVG00000008659	-	97	54.378	ENSCLAG00000014143	BYSL	99	54.378	Chinchilla_lanigera
ENSCSAVG00000008659	-	98	53.456	ENSCSAG00000011306	BYSL	98	53.456	Chlorocebus_sabaeus
ENSCSAVG00000008659	-	51	68.444	ENSCHOG00000011476	BYSL	51	68.444	Choloepus_hoffmanni
ENSCSAVG00000008659	-	99	54.709	ENSCPBG00000017439	BYSL	99	54.000	Chrysemys_picta_bellii
ENSCSAVG00000008659	-	99	84.668	ENSCING00000001646	-	100	84.211	Ciona_intestinalis
ENSCSAVG00000008659	-	98	53.687	ENSCANG00000031335	BYSL	98	53.687	Colobus_angolensis_palliatus
ENSCSAVG00000008659	-	89	52.821	ENSCGRG00001010109	-	89	54.692	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008659	-	87	54.569	ENSCGRG00001006626	-	98	50.476	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008659	-	66	57.931	ENSCGRG00001007527	-	99	56.352	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008659	-	64	62.676	ENSCGRG00001008990	-	91	62.676	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008659	-	67	54.362	ENSCGRG00000016274	-	99	54.362	Cricetulus_griseus_crigri
ENSCSAVG00000008659	-	85	55.118	ENSCGRG00000013448	-	97	49.420	Cricetulus_griseus_crigri
ENSCSAVG00000008659	-	67	48.299	ENSCGRG00000002253	-	99	48.299	Cricetulus_griseus_crigri
ENSCSAVG00000008659	-	98	51.357	ENSCGRG00000000072	-	99	51.584	Cricetulus_griseus_crigri
ENSCSAVG00000008659	-	87	54.242	ENSCGRG00000016761	-	99	49.654	Cricetulus_griseus_crigri
ENSCSAVG00000008659	-	100	55.079	ENSCSEG00000002246	bysl	95	54.977	Cynoglossus_semilaevis
ENSCSAVG00000008659	-	94	57.108	ENSCVAG00000023275	bysl	99	54.943	Cyprinodon_variegatus
ENSCSAVG00000008659	-	94	56.448	ENSDARG00000001057	bysl	86	56.448	Danio_rerio
ENSCSAVG00000008659	-	96	53.882	ENSDNOG00000016670	BYSL	97	53.882	Dasypus_novemcinctus
ENSCSAVG00000008659	-	97	54.398	ENSDORG00000010968	Bysl	99	54.398	Dipodomys_ordii
ENSCSAVG00000008659	-	90	49.254	FBgn0010292	bys	88	49.250	Drosophila_melanogaster
ENSCSAVG00000008659	-	65	61.888	ENSETEG00000018226	BYSL	65	61.888	Echinops_telfairi
ENSCSAVG00000008659	-	86	55.673	ENSEBUG00000000925	bysl	96	50.348	Eptatretus_burgeri
ENSCSAVG00000008659	-	87	58.247	ENSEASG00005003059	BYSL	99	54.042	Equus_asinus_asinus
ENSCSAVG00000008659	-	97	54.042	ENSECAG00000021260	BYSL	99	54.042	Equus_caballus
ENSCSAVG00000008659	-	95	55.819	ENSELUG00000014214	bysl	97	54.091	Esox_lucius
ENSCSAVG00000008659	-	98	54.147	ENSFCAG00000026154	BYSL	98	54.147	Felis_catus
ENSCSAVG00000008659	-	67	67.007	ENSFALG00000002897	BYSL	96	67.007	Ficedula_albicollis
ENSCSAVG00000008659	-	93	53.317	ENSFDAG00000014804	BYSL	97	52.019	Fukomys_damarensis
ENSCSAVG00000008659	-	94	57.971	ENSFHEG00000005147	bysl	99	55.000	Fundulus_heteroclitus
ENSCSAVG00000008659	-	90	59.241	ENSGMOG00000008061	bysl	91	58.942	Gadus_morhua
ENSCSAVG00000008659	-	89	58.312	ENSGALG00000003467	BYSL	91	58.312	Gallus_gallus
ENSCSAVG00000008659	-	98	56.193	ENSGAFG00000021598	bysl	98	55.734	Gambusia_affinis
ENSCSAVG00000008659	-	99	55.809	ENSGACG00000001059	bysl	99	55.125	Gasterosteus_aculeatus
ENSCSAVG00000008659	-	99	54.260	ENSGAGG00000017774	BYSL	99	53.556	Gopherus_agassizii
ENSCSAVG00000008659	-	96	53.972	ENSGGOG00000027046	BYSL	97	53.972	Gorilla_gorilla
ENSCSAVG00000008659	-	99	55.378	ENSHBUG00000002896	bysl	99	54.920	Haplochromis_burtoni
ENSCSAVG00000008659	-	97	53.917	ENSHGLG00000017479	BYSL	99	53.917	Heterocephalus_glaber_female
ENSCSAVG00000008659	-	97	53.917	ENSHGLG00100011829	BYSL	99	53.917	Heterocephalus_glaber_male
ENSCSAVG00000008659	-	99	54.920	ENSHCOG00000005390	bysl	99	54.462	Hippocampus_comes
ENSCSAVG00000008659	-	87	58.869	ENSIPUG00000017509	BYSL	99	53.378	Ictalurus_punctatus
ENSCSAVG00000008659	-	96	54.567	ENSSTOG00000021848	BYSL	97	54.567	Ictidomys_tridecemlineatus
ENSCSAVG00000008659	-	96	54.353	ENSJJAG00000023129	-	97	54.353	Jaculus_jaculus
ENSCSAVG00000008659	-	67	52.881	ENSJJAG00000003859	-	97	52.881	Jaculus_jaculus
ENSCSAVG00000008659	-	94	57.108	ENSKMAG00000021439	bysl	99	54.566	Kryptolebias_marmoratus
ENSCSAVG00000008659	-	99	54.299	ENSLOCG00000012661	bysl	98	54.525	Lepisosteus_oculatus
ENSCSAVG00000008659	-	87	59.481	ENSLAFG00000015418	BYSL	99	60.372	Loxodonta_africana
ENSCSAVG00000008659	-	98	53.456	ENSMFAG00000033214	BYSL	98	53.456	Macaca_fascicularis
ENSCSAVG00000008659	-	98	53.456	ENSMMUG00000004416	BYSL	98	53.456	Macaca_mulatta
ENSCSAVG00000008659	-	98	53.456	ENSMNEG00000043045	BYSL	98	53.456	Macaca_nemestrina
ENSCSAVG00000008659	-	98	53.456	ENSMLEG00000041724	BYSL	98	53.456	Mandrillus_leucophaeus
ENSCSAVG00000008659	-	99	56.522	ENSMAMG00000023910	bysl	99	56.293	Mastacembelus_armatus
ENSCSAVG00000008659	-	99	55.378	ENSMZEG00005011046	bysl	99	54.920	Maylandia_zebra
ENSCSAVG00000008659	-	59	68.340	ENSMGAG00000006299	BYSL	99	68.340	Meleagris_gallopavo
ENSCSAVG00000008659	-	97	54.042	ENSMICG00000011347	BYSL	99	54.042	Microcebus_murinus
ENSCSAVG00000008659	-	97	54.378	ENSMOCG00000002210	Bysl	99	54.378	Microtus_ochrogaster
ENSCSAVG00000008659	-	68	68.000	ENSMMOG00000021768	bysl	98	68.000	Mola_mola
ENSCSAVG00000008659	-	98	54.128	ENSMODG00000012808	BYSL	98	53.211	Monodelphis_domestica
ENSCSAVG00000008659	-	99	55.227	ENSMALG00000018147	bysl	99	55.000	Monopterus_albus
ENSCSAVG00000008659	-	96	53.630	MGP_CAROLIEiJ_G0021703	Bysl	97	53.630	Mus_caroli
ENSCSAVG00000008659	-	96	54.695	ENSMUSG00000023988	Bysl	97	54.695	Mus_musculus
ENSCSAVG00000008659	-	96	54.353	MGP_PahariEiJ_G0020693	Bysl	97	54.353	Mus_pahari
ENSCSAVG00000008659	-	96	54.695	MGP_SPRETEiJ_G0022615	Bysl	97	54.695	Mus_spretus
ENSCSAVG00000008659	-	97	53.349	ENSMPUG00000013486	BYSL	99	53.349	Mustela_putorius_furo
ENSCSAVG00000008659	-	97	54.273	ENSMLUG00000014028	BYSL	99	54.273	Myotis_lucifugus
ENSCSAVG00000008659	-	66	65.753	ENSNGAG00000005496	Bysl	99	65.753	Nannospalax_galili
ENSCSAVG00000008659	-	99	55.606	ENSNBRG00000006639	bysl	99	55.149	Neolamprologus_brichardi
ENSCSAVG00000008659	-	98	46.207	ENSNLEG00000032809	BYSL	98	46.207	Nomascus_leucogenys
ENSCSAVG00000008659	-	65	64.685	ENSMEUG00000000759	BYSL	98	64.685	Notamacropus_eugenii
ENSCSAVG00000008659	-	98	53.563	ENSOPRG00000015845	BYSL	99	53.563	Ochotona_princeps
ENSCSAVG00000008659	-	94	55.476	ENSODEG00000016059	BYSL	96	55.476	Octodon_degus
ENSCSAVG00000008659	-	99	55.378	ENSONIG00000018932	bysl	98	54.920	Oreochromis_niloticus
ENSCSAVG00000008659	-	97	54.358	ENSOCUG00000017567	BYSL	99	54.318	Oryctolagus_cuniculus
ENSCSAVG00000008659	-	99	55.936	ENSORLG00000000248	bysl	99	55.936	Oryzias_latipes
ENSCSAVG00000008659	-	99	55.708	ENSORLG00020008275	bysl	99	55.708	Oryzias_latipes_hni
ENSCSAVG00000008659	-	99	55.936	ENSORLG00015004475	bysl	99	55.936	Oryzias_latipes_hsok
ENSCSAVG00000008659	-	94	57.385	ENSOMEG00000015003	bysl	99	55.734	Oryzias_melastigma
ENSCSAVG00000008659	-	97	54.378	ENSOGAG00000015234	BYSL	98	54.378	Otolemur_garnettii
ENSCSAVG00000008659	-	78	62.029	ENSOARG00000002863	BYSL	90	61.905	Ovis_aries
ENSCSAVG00000008659	-	98	54.023	ENSPPAG00000028063	BYSL	98	54.023	Pan_paniscus
ENSCSAVG00000008659	-	98	54.147	ENSPPRG00000010500	BYSL	98	54.147	Panthera_pardus
ENSCSAVG00000008659	-	98	54.147	ENSPTIG00000010244	BYSL	98	54.147	Panthera_tigris_altaica
ENSCSAVG00000008659	-	98	54.023	ENSPTRG00000018163	BYSL	98	54.023	Pan_troglodytes
ENSCSAVG00000008659	-	98	53.456	ENSPANG00000007619	BYSL	98	53.456	Papio_anubis
ENSCSAVG00000008659	-	93	56.659	ENSPKIG00000001265	bysl	98	54.965	Paramormyrops_kingsleyae
ENSCSAVG00000008659	-	89	60.000	ENSPSIG00000009405	BYSL	99	54.120	Pelodiscus_sinensis
ENSCSAVG00000008659	-	99	56.912	ENSPMGG00000004006	bysl	99	55.991	Periophthalmus_magnuspinnatus
ENSCSAVG00000008659	-	87	59.021	ENSPEMG00000022283	Bysl	98	66.107	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008659	-	76	60.355	ENSPMAG00000000953	bysl	97	60.355	Petromyzon_marinus
ENSCSAVG00000008659	-	98	52.860	ENSPCIG00000025889	BYSL	98	52.632	Phascolarctos_cinereus
ENSCSAVG00000008659	-	99	56.064	ENSPFOG00000000406	bysl	99	55.378	Poecilia_formosa
ENSCSAVG00000008659	-	94	58.454	ENSPLAG00000013506	bysl	99	55.378	Poecilia_latipinna
ENSCSAVG00000008659	-	99	56.293	ENSPMEG00000004461	bysl	99	55.606	Poecilia_mexicana
ENSCSAVG00000008659	-	94	58.413	ENSPREG00000004437	bysl	99	55.809	Poecilia_reticulata
ENSCSAVG00000008659	-	52	59.471	ENSPPYG00000017273	-	94	59.633	Pongo_abelii
ENSCSAVG00000008659	-	66	59.259	ENSPCAG00000004575	BYSL	77	59.259	Procavia_capensis
ENSCSAVG00000008659	-	97	53.811	ENSPCOG00000020727	-	99	53.811	Propithecus_coquereli
ENSCSAVG00000008659	-	98	44.240	ENSPCOG00000003664	-	98	44.240	Propithecus_coquereli
ENSCSAVG00000008659	-	97	53.917	ENSPVAG00000007606	BYSL	99	53.917	Pteropus_vampyrus
ENSCSAVG00000008659	-	99	55.378	ENSPNYG00000007839	bysl	99	54.920	Pundamilia_nyererei
ENSCSAVG00000008659	-	92	58.333	ENSPNAG00000010533	bysl	93	58.333	Pygocentrus_nattereri
ENSCSAVG00000008659	-	96	53.380	ENSRNOG00000049121	Bysl	98	53.380	Rattus_norvegicus
ENSCSAVG00000008659	-	98	53.226	ENSRBIG00000030183	BYSL	98	53.226	Rhinopithecus_bieti
ENSCSAVG00000008659	-	98	53.687	ENSRROG00000007843	-	98	53.687	Rhinopithecus_roxellana
ENSCSAVG00000008659	-	97	53.846	ENSRROG00000030276	-	97	54.419	Rhinopithecus_roxellana
ENSCSAVG00000008659	-	63	40.850	YBR247C	ENP1	85	36.627	Saccharomyces_cerevisiae
ENSCSAVG00000008659	-	98	53.917	ENSSBOG00000034517	BYSL	98	53.917	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008659	-	93	53.976	ENSSHAG00000003954	BYSL	94	53.735	Sarcophilus_harrisii
ENSCSAVG00000008659	-	97	54.378	ENSSFOG00015016401	bysl	98	53.687	Scleropages_formosus
ENSCSAVG00000008659	-	94	57.590	ENSSMAG00000000371	bysl	99	55.708	Scophthalmus_maximus
ENSCSAVG00000008659	-	94	57.869	ENSSDUG00000009127	bysl	99	55.227	Seriola_dumerili
ENSCSAVG00000008659	-	94	57.869	ENSSLDG00000022707	bysl	99	55.227	Seriola_lalandi_dorsalis
ENSCSAVG00000008659	-	88	52.308	ENSSPUG00000007702	BYSL	90	52.308	Sphenodon_punctatus
ENSCSAVG00000008659	-	94	57.971	ENSSPAG00000013378	bysl	99	54.920	Stegastes_partitus
ENSCSAVG00000008659	-	98	53.440	ENSSSCG00000026752	BYSL	99	52.304	Sus_scrofa
ENSCSAVG00000008659	-	99	55.708	ENSTRUG00000008963	bysl	98	64.452	Takifugu_rubripes
ENSCSAVG00000008659	-	94	57.143	ENSTNIG00000014648	bysl	95	57.488	Tetraodon_nigroviridis
ENSCSAVG00000008659	-	67	64.164	ENSTBEG00000009332	-	67	64.164	Tupaia_belangeri
ENSCSAVG00000008659	-	98	47.018	ENSTTRG00000009429	BYSL	99	46.241	Tursiops_truncatus
ENSCSAVG00000008659	-	86	58.268	ENSUAMG00000027838	BYSL	97	53.864	Ursus_americanus
ENSCSAVG00000008659	-	86	52.591	ENSUMAG00000011988	BYSL	97	48.843	Ursus_maritimus
ENSCSAVG00000008659	-	71	51.572	ENSVPAG00000005678	BYSL	73	50.467	Vicugna_pacos
ENSCSAVG00000008659	-	98	55.632	ENSVVUG00000026680	BYSL	98	55.632	Vulpes_vulpes
ENSCSAVG00000008659	-	89	58.333	ENSXETG00000011846	bysl	91	57.576	Xenopus_tropicalis
ENSCSAVG00000008659	-	92	55.257	ENSXCOG00000003684	bysl	92	54.237	Xiphophorus_couchianus
ENSCSAVG00000008659	-	92	59.214	ENSXMAG00000001060	bysl	98	55.835	Xiphophorus_maculatus