EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008668 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1257 bases
Position: chrreftig_77:3361096-3362352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014819	THUMP	PF02926.17	6.2e-06	1	1
ENSCSAVP00000014819	UPF0020	PF01170.18	4.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000014992	-	1257	-	ENSCSAVP00000014819	419 (aa)	-	H2ZB54

Gene Model

Click here to download ENSCSAVG00000008668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008668's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008668	-	96	41.850	ENSG00000134077	THUMPD3	89	42.070	Homo_sapiens
ENSCSAVG00000008668	-	97	41.648	ENSAPOG00000015836	thumpd3	90	42.105	Acanthochromis_polyacanthus
ENSCSAVG00000008668	-	97	41.189	ENSAMEG00000011321	THUMPD3	90	41.886	Ailuropoda_melanoleuca
ENSCSAVG00000008668	-	97	41.270	ENSACIG00000020096	thumpd3	88	41.419	Amphilophus_citrinellus
ENSCSAVG00000008668	-	97	41.876	ENSAOCG00000004399	thumpd3	88	42.334	Amphiprion_ocellaris
ENSCSAVG00000008668	-	97	42.105	ENSAPEG00000016740	thumpd3	88	42.563	Amphiprion_percula
ENSCSAVG00000008668	-	97	41.190	ENSATEG00000005345	thumpd3	88	41.648	Anabas_testudineus
ENSCSAVG00000008668	-	83	41.582	ENSAPLG00000003598	THUMPD3	99	41.117	Anas_platyrhynchos
ENSCSAVG00000008668	-	95	40.299	ENSACAG00000014974	THUMPD3	90	40.299	Anolis_carolinensis
ENSCSAVG00000008668	-	96	41.099	ENSANAG00000002365	THUMPD3	90	40.879	Aotus_nancymaae
ENSCSAVG00000008668	-	97	39.310	ENSACLG00000023333	thumpd3	88	40.183	Astatotilapia_calliptera
ENSCSAVG00000008668	-	66	39.726	ENSACLG00000013504	-	71	39.726	Astatotilapia_calliptera
ENSCSAVG00000008668	-	96	41.570	ENSAMXG00000015683	thumpd3	92	41.570	Astyanax_mexicanus
ENSCSAVG00000008668	-	97	41.630	ENSBTAG00000003112	THUMPD3	90	42.105	Bos_taurus
ENSCSAVG00000008668	-	95	34.383	WBGene00010846	M04B2.2	98	34.940	Caenorhabditis_elegans
ENSCSAVG00000008668	-	96	41.280	ENSCJAG00000015949	THUMPD3	89	40.659	Callithrix_jacchus
ENSCSAVG00000008668	-	97	41.667	ENSCAFG00000005499	THUMPD3	90	41.886	Canis_familiaris
ENSCSAVG00000008668	-	80	39.740	ENSCAFG00000008060	-	93	40.000	Canis_familiaris
ENSCSAVG00000008668	-	87	41.019	ENSCAFG00020025887	-	95	41.262	Canis_lupus_dingo
ENSCSAVG00000008668	-	97	41.667	ENSCAFG00020008895	-	90	41.886	Canis_lupus_dingo
ENSCSAVG00000008668	-	97	41.215	ENSCHIG00000024037	THUMPD3	91	42.094	Capra_hircus
ENSCSAVG00000008668	-	96	41.630	ENSTSYG00000000159	THUMPD3	90	41.319	Carlito_syrichta
ENSCSAVG00000008668	-	72	38.636	ENSCAPG00000017486	THUMPD3	61	38.636	Cavia_aperea
ENSCSAVG00000008668	-	96	41.087	ENSCPOG00000033287	THUMPD3	89	41.593	Cavia_porcellus
ENSCSAVG00000008668	-	96	37.556	ENSCCAG00000021429	-	92	38.255	Cebus_capucinus
ENSCSAVG00000008668	-	96	41.501	ENSCCAG00000027067	-	90	41.901	Cebus_capucinus
ENSCSAVG00000008668	-	96	41.630	ENSCATG00000040999	THUMPD3	90	41.722	Cercocebus_atys
ENSCSAVG00000008668	-	96	42.731	ENSCLAG00000000690	THUMPD3	89	43.172	Chinchilla_lanigera
ENSCSAVG00000008668	-	96	41.410	ENSCSAG00000010753	THUMPD3	90	41.280	Chlorocebus_sabaeus
ENSCSAVG00000008668	-	82	36.709	ENSCHOG00000012851	THUMPD3	73	36.709	Choloepus_hoffmanni
ENSCSAVG00000008668	-	95	40.870	ENSCPBG00000014771	THUMPD3	90	40.476	Chrysemys_picta_bellii
ENSCSAVG00000008668	-	96	41.630	ENSCANG00000031901	THUMPD3	90	41.501	Colobus_angolensis_palliatus
ENSCSAVG00000008668	-	97	41.099	ENSCGRG00001024117	Thumpd3	90	40.879	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008668	-	97	41.099	ENSCGRG00000018116	Thumpd3	90	40.879	Cricetulus_griseus_crigri
ENSCSAVG00000008668	-	97	40.183	ENSCSEG00000002546	thumpd3	90	40.183	Cynoglossus_semilaevis
ENSCSAVG00000008668	-	97	40.590	ENSCVAG00000001019	thumpd3	87	40.590	Cyprinodon_variegatus
ENSCSAVG00000008668	-	96	40.724	ENSDARG00000059634	thumpd3	93	40.950	Danio_rerio
ENSCSAVG00000008668	-	97	41.138	ENSDNOG00000047668	THUMPD3	90	40.263	Dasypus_novemcinctus
ENSCSAVG00000008668	-	97	41.758	ENSDORG00000003257	Thumpd3	90	42.232	Dipodomys_ordii
ENSCSAVG00000008668	-	63	42.244	ENSETEG00000020239	-	59	42.384	Echinops_telfairi
ENSCSAVG00000008668	-	92	38.140	ENSEBUG00000004221	thumpd3	95	38.140	Eptatretus_burgeri
ENSCSAVG00000008668	-	97	39.648	ENSEASG00005013327	THUMPD3	90	39.648	Equus_asinus_asinus
ENSCSAVG00000008668	-	97	41.850	ENSECAG00000002016	THUMPD3	90	41.850	Equus_caballus
ENSCSAVG00000008668	-	97	36.623	ENSEEUG00000014696	THUMPD3	90	37.336	Erinaceus_europaeus
ENSCSAVG00000008668	-	88	46.520	ENSELUG00000018246	thumpd3	67	46.520	Esox_lucius
ENSCSAVG00000008668	-	97	41.319	ENSFCAG00000006171	THUMPD3	90	41.538	Felis_catus
ENSCSAVG00000008668	-	89	39.907	ENSFALG00000013631	THUMPD3	89	40.371	Ficedula_albicollis
ENSCSAVG00000008668	-	96	40.839	ENSFDAG00000014825	THUMPD3	89	40.088	Fukomys_damarensis
ENSCSAVG00000008668	-	97	40.136	ENSFHEG00000006006	thumpd3	88	40.136	Fundulus_heteroclitus
ENSCSAVG00000008668	-	97	39.545	ENSGMOG00000007923	thumpd3	89	39.679	Gadus_morhua
ENSCSAVG00000008668	-	95	41.164	ENSGALG00000044813	THUMPD3	94	41.202	Gallus_gallus
ENSCSAVG00000008668	-	97	41.766	ENSGAFG00000021645	thumpd3	88	40.909	Gambusia_affinis
ENSCSAVG00000008668	-	97	42.009	ENSGACG00000000930	thumpd3	93	42.009	Gasterosteus_aculeatus
ENSCSAVG00000008668	-	95	41.087	ENSGAGG00000022750	THUMPD3	90	40.476	Gopherus_agassizii
ENSCSAVG00000008668	-	96	41.630	ENSGGOG00000000604	THUMPD3	89	41.850	Gorilla_gorilla
ENSCSAVG00000008668	-	52	30.804	ENSHBUG00000011780	-	51	30.769	Haplochromis_burtoni
ENSCSAVG00000008668	-	97	39.310	ENSHBUG00000013405	thumpd3	88	40.920	Haplochromis_burtoni
ENSCSAVG00000008668	-	96	43.016	ENSHGLG00000016200	THUMPD3	89	42.952	Heterocephalus_glaber_female
ENSCSAVG00000008668	-	96	42.920	ENSHGLG00100017321	-	89	42.257	Heterocephalus_glaber_male
ENSCSAVG00000008668	-	95	38.106	ENSHGLG00100000505	-	91	38.799	Heterocephalus_glaber_male
ENSCSAVG00000008668	-	97	40.961	ENSHCOG00000004871	thumpd3	92	41.648	Hippocampus_comes
ENSCSAVG00000008668	-	96	41.244	ENSIPUG00000019415	THUMPD3	90	41.244	Ictalurus_punctatus
ENSCSAVG00000008668	-	96	42.478	ENSSTOG00000003973	THUMPD3	90	42.478	Ictidomys_tridecemlineatus
ENSCSAVG00000008668	-	96	39.367	ENSJJAG00000017751	Thumpd3	88	39.111	Jaculus_jaculus
ENSCSAVG00000008668	-	97	42.093	ENSKMAG00000021025	thumpd3	83	42.093	Kryptolebias_marmoratus
ENSCSAVG00000008668	-	97	40.826	ENSLBEG00000012252	thumpd3	88	42.334	Labrus_bergylta
ENSCSAVG00000008668	-	97	40.700	ENSLACG00000018604	THUMPD3	90	40.919	Latimeria_chalumnae
ENSCSAVG00000008668	-	88	47.794	ENSLOCG00000009800	thumpd3	93	40.000	Lepisosteus_oculatus
ENSCSAVG00000008668	-	97	42.763	ENSLAFG00000005103	THUMPD3	90	42.763	Loxodonta_africana
ENSCSAVG00000008668	-	96	41.410	ENSMFAG00000044884	THUMPD3	90	41.280	Macaca_fascicularis
ENSCSAVG00000008668	-	96	41.410	ENSMMUG00000017307	THUMPD3	90	41.280	Macaca_mulatta
ENSCSAVG00000008668	-	96	41.410	ENSMNEG00000030529	THUMPD3	90	41.280	Macaca_nemestrina
ENSCSAVG00000008668	-	96	41.630	ENSMLEG00000032943	THUMPD3	90	41.722	Mandrillus_leucophaeus
ENSCSAVG00000008668	-	97	40.961	ENSMAMG00000023934	thumpd3	89	43.636	Mastacembelus_armatus
ENSCSAVG00000008668	-	97	39.310	ENSMZEG00005010623	thumpd3	88	40.183	Maylandia_zebra
ENSCSAVG00000008668	-	85	41.103	ENSMGAG00000010182	THUMPD3	100	41.604	Meleagris_gallopavo
ENSCSAVG00000008668	-	97	40.969	ENSMAUG00000012250	Thumpd3	90	40.523	Mesocricetus_auratus
ENSCSAVG00000008668	-	95	41.469	ENSMICG00000010095	THUMPD3	89	41.189	Microcebus_murinus
ENSCSAVG00000008668	-	97	41.009	ENSMOCG00000020148	Thumpd3	90	40.217	Microtus_ochrogaster
ENSCSAVG00000008668	-	97	42.494	ENSMMOG00000021791	thumpd3	92	43.318	Mola_mola
ENSCSAVG00000008668	-	96	41.432	ENSMODG00000004715	-	90	42.117	Monodelphis_domestica
ENSCSAVG00000008668	-	96	42.202	ENSMALG00000017316	thumpd3	92	42.202	Monopterus_albus
ENSCSAVG00000008668	-	58	36.620	MGP_CAROLIEiJ_G0028714	-	58	36.620	Mus_caroli
ENSCSAVG00000008668	-	97	40.652	ENSMUSG00000030264	Thumpd3	91	40.043	Mus_musculus
ENSCSAVG00000008668	-	97	40.652	MGP_PahariEiJ_G0022465	Thumpd3	91	40.257	Mus_pahari
ENSCSAVG00000008668	-	97	40.652	MGP_SPRETEiJ_G0029742	Thumpd3	91	40.043	Mus_spretus
ENSCSAVG00000008668	-	97	41.593	ENSMPUG00000017066	-	90	42.731	Mustela_putorius_furo
ENSCSAVG00000008668	-	97	40.498	ENSMPUG00000005219	-	90	40.498	Mustela_putorius_furo
ENSCSAVG00000008668	-	97	43.929	ENSMLUG00000008538	THUMPD3	88	43.929	Myotis_lucifugus
ENSCSAVG00000008668	-	96	41.060	ENSNGAG00000021014	-	90	40.440	Nannospalax_galili
ENSCSAVG00000008668	-	96	34.642	ENSNGAG00000001549	-	88	35.104	Nannospalax_galili
ENSCSAVG00000008668	-	97	39.310	ENSNBRG00000004886	thumpd3	88	40.920	Neolamprologus_brichardi
ENSCSAVG00000008668	-	96	41.850	ENSNLEG00000003863	THUMPD3	90	42.070	Nomascus_leucogenys
ENSCSAVG00000008668	-	85	40.741	ENSMEUG00000009819	THUMPD3	96	40.988	Notamacropus_eugenii
ENSCSAVG00000008668	-	85	39.320	ENSOPRG00000002020	THUMPD3	96	40.541	Ochotona_princeps
ENSCSAVG00000008668	-	73	40.793	ENSODEG00000018242	THUMPD3	99	39.888	Octodon_degus
ENSCSAVG00000008668	-	97	41.379	ENSONIG00000018977	thumpd3	88	41.379	Oreochromis_niloticus
ENSCSAVG00000008668	-	86	39.173	ENSOANG00000014481	THUMPD3	97	39.173	Ornithorhynchus_anatinus
ENSCSAVG00000008668	-	96	40.351	ENSOCUG00000010921	THUMPD3	89	41.253	Oryctolagus_cuniculus
ENSCSAVG00000008668	-	97	43.448	ENSORLG00000000676	thumpd3	90	43.448	Oryzias_latipes
ENSCSAVG00000008668	-	97	43.488	ENSORLG00020007509	thumpd3	90	43.488	Oryzias_latipes_hni
ENSCSAVG00000008668	-	97	43.448	ENSORLG00015003615	thumpd3	90	43.448	Oryzias_latipes_hsok
ENSCSAVG00000008668	-	97	43.357	ENSOMEG00000014115	thumpd3	89	44.811	Oryzias_melastigma
ENSCSAVG00000008668	-	85	40.050	ENSOGAG00000017111	THUMPD3	98	41.294	Otolemur_garnettii
ENSCSAVG00000008668	-	98	41.379	ENSOARG00000007139	THUMPD3	90	41.416	Ovis_aries
ENSCSAVG00000008668	-	96	41.850	ENSPPAG00000025852	THUMPD3	89	42.070	Pan_paniscus
ENSCSAVG00000008668	-	97	42.384	ENSPPRG00000008071	THUMPD3	90	41.978	Panthera_pardus
ENSCSAVG00000008668	-	97	42.163	ENSPTIG00000017923	THUMPD3	90	41.758	Panthera_tigris_altaica
ENSCSAVG00000008668	-	96	42.070	ENSPTRG00000014585	THUMPD3	89	42.291	Pan_troglodytes
ENSCSAVG00000008668	-	96	40.969	ENSPANG00000016253	THUMPD3	89	40.618	Papio_anubis
ENSCSAVG00000008668	-	97	41.031	ENSPKIG00000014009	thumpd3	91	41.031	Paramormyrops_kingsleyae
ENSCSAVG00000008668	-	95	41.304	ENSPSIG00000007370	THUMPD3	90	40.998	Pelodiscus_sinensis
ENSCSAVG00000008668	-	97	43.418	ENSPMGG00000017563	thumpd3	91	43.418	Periophthalmus_magnuspinnatus
ENSCSAVG00000008668	-	97	40.839	ENSPEMG00000022411	Thumpd3	90	41.060	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008668	-	97	34.914	ENSPMAG00000001291	thumpd3	98	36.322	Petromyzon_marinus
ENSCSAVG00000008668	-	99	40.851	ENSPCIG00000002049	THUMPD3	92	40.678	Phascolarctos_cinereus
ENSCSAVG00000008668	-	97	42.237	ENSPFOG00000002318	thumpd3	88	42.237	Poecilia_formosa
ENSCSAVG00000008668	-	97	42.237	ENSPLAG00000014804	thumpd3	88	42.237	Poecilia_latipinna
ENSCSAVG00000008668	-	97	42.237	ENSPMEG00000000582	thumpd3	88	42.237	Poecilia_mexicana
ENSCSAVG00000008668	-	97	41.723	ENSPREG00000009176	thumpd3	88	41.723	Poecilia_reticulata
ENSCSAVG00000008668	-	94	31.678	ENSPPYG00000017616	-	88	31.678	Pongo_abelii
ENSCSAVG00000008668	-	96	41.630	ENSPPYG00000029461	THUMPD3	90	41.850	Pongo_abelii
ENSCSAVG00000008668	-	85	41.872	ENSPCAG00000015398	THUMPD3	96	41.872	Procavia_capensis
ENSCSAVG00000008668	-	96	37.307	ENSPCOG00000018095	-	89	38.242	Propithecus_coquereli
ENSCSAVG00000008668	-	83	39.043	ENSPCOG00000023618	-	90	40.302	Propithecus_coquereli
ENSCSAVG00000008668	-	97	42.952	ENSPVAG00000008721	THUMPD3	90	42.952	Pteropus_vampyrus
ENSCSAVG00000008668	-	97	39.310	ENSPNYG00000006918	thumpd3	88	40.183	Pundamilia_nyererei
ENSCSAVG00000008668	-	95	41.958	ENSPNAG00000014936	thumpd3	89	41.958	Pygocentrus_nattereri
ENSCSAVG00000008668	-	97	39.746	ENSRNOG00000006941	Thumpd3	91	39.915	Rattus_norvegicus
ENSCSAVG00000008668	-	96	41.410	ENSRBIG00000035954	THUMPD3	90	41.280	Rhinopithecus_bieti
ENSCSAVG00000008668	-	96	41.189	ENSRROG00000035734	THUMPD3	90	41.060	Rhinopithecus_roxellana
ENSCSAVG00000008668	-	96	41.871	ENSSBOG00000023567	THUMPD3	92	42.478	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008668	-	96	41.921	ENSSHAG00000014467	THUMPD3	90	41.266	Sarcophilus_harrisii
ENSCSAVG00000008668	-	97	42.212	ENSSFOG00015019210	thumpd3	90	42.212	Scleropages_formosus
ENSCSAVG00000008668	-	97	40.275	ENSSMAG00000000609	thumpd3	92	41.648	Scophthalmus_maximus
ENSCSAVG00000008668	-	97	40.503	ENSSDUG00000012179	thumpd3	91	40.503	Seriola_dumerili
ENSCSAVG00000008668	-	97	40.909	ENSSLDG00000022028	thumpd3	89	40.909	Seriola_lalandi_dorsalis
ENSCSAVG00000008668	-	81	43.791	ENSSARG00000002239	THUMPD3	76	43.791	Sorex_araneus
ENSCSAVG00000008668	-	96	39.400	ENSSPUG00000017461	THUMPD3	92	40.938	Sphenodon_punctatus
ENSCSAVG00000008668	-	97	41.935	ENSSPAG00000008345	thumpd3	87	42.396	Stegastes_partitus
ENSCSAVG00000008668	-	97	40.969	ENSSSCG00000011542	THUMPD3	90	41.379	Sus_scrofa
ENSCSAVG00000008668	-	95	42.984	ENSTGUG00000010440	THUMPD3	100	42.984	Taeniopygia_guttata
ENSCSAVG00000008668	-	97	40.698	ENSTRUG00000004420	thumpd3	90	40.698	Takifugu_rubripes
ENSCSAVG00000008668	-	97	41.549	ENSTNIG00000014627	thumpd3	94	41.920	Tetraodon_nigroviridis
ENSCSAVG00000008668	-	97	38.546	ENSTBEG00000003450	THUMPD3	89	38.793	Tupaia_belangeri
ENSCSAVG00000008668	-	97	40.570	ENSTTRG00000009694	THUMPD3	90	40.789	Tursiops_truncatus
ENSCSAVG00000008668	-	97	41.667	ENSUAMG00000009412	THUMPD3	90	41.447	Ursus_americanus
ENSCSAVG00000008668	-	97	42.500	ENSUMAG00000019241	THUMPD3	89	44.289	Ursus_maritimus
ENSCSAVG00000008668	-	79	40.682	ENSVPAG00000002855	THUMPD3	91	40.314	Vicugna_pacos
ENSCSAVG00000008668	-	97	41.630	ENSVVUG00000025278	THUMPD3	90	41.667	Vulpes_vulpes
ENSCSAVG00000008668	-	96	39.294	ENSXETG00000001447	thumpd3	89	39.073	Xenopus_tropicalis
ENSCSAVG00000008668	-	97	40.909	ENSXCOG00000000159	thumpd3	92	40.909	Xiphophorus_couchianus
ENSCSAVG00000008668	-	97	40.909	ENSXMAG00000001423	thumpd3	88	40.909	Xiphophorus_maculatus