EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008684 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3123 bases
Position: chrreftig_9:562712-565834
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014841	MMR_HSR1	PF01926.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015014	-	657	-	ENSCSAVP00000014841	210 (aa)	-	H2ZB76

Gene Model

Click here to download ENSCSAVG00000008684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008684	-	89	45.161	ENSCSAVG00000000160	-	86	45.161
ENSCSAVG00000008684	-	75	39.873	ENSCSAVG00000001356	-	65	39.873
ENSCSAVG00000008684	-	81	33.143	ENSCSAVG00000011162	-	83	33.143
ENSCSAVG00000008684	-	75	33.121	ENSCSAVG00000006042	-	73	33.121
ENSCSAVG00000008684	-	75	43.312	ENSCSAVG00000008995	-	97	43.312
ENSCSAVG00000008684	-	75	47.134	ENSCSAVG00000009128	-	74	47.134
ENSCSAVG00000008684	-	81	47.368	ENSCSAVG00000009147	-	83	47.368
ENSCSAVG00000008684	-	74	40.741	ENSCSAVG00000005689	-	76	40.741
ENSCSAVG00000008684	-	90	32.461	ENSCSAVG00000005450	-	78	32.461
ENSCSAVG00000008684	-	79	40.606	ENSCSAVG00000000613	-	88	40.606
ENSCSAVG00000008684	-	73	43.506	ENSCSAVG00000005120	-	70	44.118
ENSCSAVG00000008684	-	78	31.928	ENSCSAVG00000009503	-	83	31.928
ENSCSAVG00000008684	-	80	45.402	ENSCSAVG00000010245	-	58	45.402
ENSCSAVG00000008684	-	90	50.532	ENSCSAVG00000002088	-	87	50.532
ENSCSAVG00000008684	-	95	30.332	ENSCSAVG00000007813	-	79	30.332
ENSCSAVG00000008684	-	80	44.379	ENSCSAVG00000010348	-	82	44.379
ENSCSAVG00000008684	-	79	40.230	ENSCSAVG00000002804	-	81	40.230

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008684	-	97	51.691	WBGene00004286	rab-39	90	51.691	Caenorhabditis_elegans
ENSCSAVG00000008684	-	99	58.796	FBgn0029959	Rab39	99	58.796	Drosophila_melanogaster
ENSCSAVG00000008684	-	99	50.000	ENSEBUG00000004971	-	98	50.000	Eptatretus_burgeri