EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008720 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4953 bases
Position: chrreftig_11:1143800-1148752
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014894	PRP3	PF08572.10	5.1e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015068	-	1925	-	ENSCSAVP00000014894	575 (aa)	-	H2ZBC9

Gene Model

Click here to download ENSCSAVG00000008720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008720	-	94	54.792	ENSG00000117360	PRPF3	83	54.035	Homo_sapiens
ENSCSAVG00000008720	-	94	53.369	ENSAPOG00000015584	prpf3	83	52.577	Acanthochromis_polyacanthus
ENSCSAVG00000008720	-	94	54.792	ENSAMEG00000001630	PRPF3	83	54.035	Ailuropoda_melanoleuca
ENSCSAVG00000008720	-	97	52.650	ENSACIG00000007876	prpf3	82	52.650	Amphilophus_citrinellus
ENSCSAVG00000008720	-	94	54.336	ENSAOCG00000011449	prpf3	83	53.516	Amphiprion_ocellaris
ENSCSAVG00000008720	-	94	54.078	ENSATEG00000023583	prpf3	86	49.082	Anabas_testudineus
ENSCSAVG00000008720	-	94	55.135	ENSAPLG00000002440	PRPF3	80	55.054	Anas_platyrhynchos
ENSCSAVG00000008720	-	94	54.301	ENSACAG00000003176	PRPF3	83	54.007	Anolis_carolinensis
ENSCSAVG00000008720	-	94	54.792	ENSANAG00000026138	PRPF3	83	54.035	Aotus_nancymaae
ENSCSAVG00000008720	-	94	54.874	ENSACLG00000020127	prpf3	80	54.693	Astatotilapia_calliptera
ENSCSAVG00000008720	-	97	51.672	ENSAMXG00000007306	prpf3	86	50.814	Astyanax_mexicanus
ENSCSAVG00000008720	-	94	54.792	ENSBTAG00000013946	PRPF3	83	54.035	Bos_taurus
ENSCSAVG00000008720	-	65	50.928	WBGene00010844	prp-3	60	50.928	Caenorhabditis_elegans
ENSCSAVG00000008720	-	94	54.792	ENSCJAG00000009926	PRPF3	83	54.035	Callithrix_jacchus
ENSCSAVG00000008720	-	94	54.792	ENSCAFG00000011820	PRPF3	83	54.035	Canis_familiaris
ENSCSAVG00000008720	-	71	54.524	ENSCAFG00020019653	PRPF3	79	53.547	Canis_lupus_dingo
ENSCSAVG00000008720	-	94	54.792	ENSCHIG00000015434	PRPF3	83	54.035	Capra_hircus
ENSCSAVG00000008720	-	94	54.973	ENSTSYG00000001383	PRPF3	83	54.211	Carlito_syrichta
ENSCSAVG00000008720	-	85	54.949	ENSCAPG00000017812	PRPF3	74	55.063	Cavia_aperea
ENSCSAVG00000008720	-	94	54.973	ENSCPOG00000008068	PRPF3	83	54.211	Cavia_porcellus
ENSCSAVG00000008720	-	94	54.792	ENSCCAG00000026380	PRPF3	83	54.035	Cebus_capucinus
ENSCSAVG00000008720	-	94	43.863	ENSCATG00000041778	PRPF3	81	43.304	Cercocebus_atys
ENSCSAVG00000008720	-	94	54.792	ENSCLAG00000015009	PRPF3	83	54.035	Chinchilla_lanigera
ENSCSAVG00000008720	-	94	54.955	ENSCPBG00000008216	PRPF3	83	54.116	Chrysemys_picta_bellii
ENSCSAVG00000008720	-	72	83.894	ENSCING00000003312	-	100	83.894	Ciona_intestinalis
ENSCSAVG00000008720	-	94	54.792	ENSCANG00000036769	PRPF3	83	54.035	Colobus_angolensis_palliatus
ENSCSAVG00000008720	-	94	54.792	ENSCGRG00001019100	Prpf3	83	54.035	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008720	-	94	54.792	ENSCGRG00000007322	Prpf3	83	54.035	Cricetulus_griseus_crigri
ENSCSAVG00000008720	-	97	53.022	ENSCSEG00000002532	prpf3	83	51.602	Cynoglossus_semilaevis
ENSCSAVG00000008720	-	97	53.713	ENSCVAG00000009318	prpf3	82	53.541	Cyprinodon_variegatus
ENSCSAVG00000008720	-	94	52.951	ENSDARG00000086425	prpf3	80	52.951	Danio_rerio
ENSCSAVG00000008720	-	92	55.331	ENSDNOG00000005904	PRPF3	85	55.331	Dasypus_novemcinctus
ENSCSAVG00000008720	-	94	54.792	ENSDORG00000008664	Prpf3	89	54.291	Dipodomys_ordii
ENSCSAVG00000008720	-	98	48.398	FBgn0036915	Prp3	92	50.000	Drosophila_melanogaster
ENSCSAVG00000008720	-	94	54.430	ENSETEG00000019124	PRPF3	83	53.765	Echinops_telfairi
ENSCSAVG00000008720	-	93	49.830	ENSEBUG00000011680	prpf3	65	54.470	Eptatretus_burgeri
ENSCSAVG00000008720	-	94	54.611	ENSEASG00005001566	PRPF3	83	53.860	Equus_asinus_asinus
ENSCSAVG00000008720	-	94	54.792	ENSECAG00000019840	PRPF3	83	54.035	Equus_caballus
ENSCSAVG00000008720	-	76	55.455	ENSEEUG00000007338	PRPF3	64	55.455	Erinaceus_europaeus
ENSCSAVG00000008720	-	94	47.965	ENSELUG00000013624	prpf3	83	47.119	Esox_lucius
ENSCSAVG00000008720	-	94	54.792	ENSFCAG00000013940	PRPF3	83	54.035	Felis_catus
ENSCSAVG00000008720	-	94	54.430	ENSFDAG00000010365	PRPF3	83	53.684	Fukomys_damarensis
ENSCSAVG00000008720	-	97	53.287	ENSFHEG00000021746	prpf3	84	53.114	Fundulus_heteroclitus
ENSCSAVG00000008720	-	94	53.263	ENSGMOG00000008535	prpf3	83	52.300	Gadus_morhua
ENSCSAVG00000008720	-	94	55.135	ENSGALG00000028205	PRPF3	80	55.054	Gallus_gallus
ENSCSAVG00000008720	-	97	53.752	ENSGAFG00000012671	prpf3	82	53.578	Gambusia_affinis
ENSCSAVG00000008720	-	93	53.915	ENSGACG00000011792	prpf3	82	52.641	Gasterosteus_aculeatus
ENSCSAVG00000008720	-	94	54.874	ENSGAGG00000013765	PRPF3	99	55.191	Gopherus_agassizii
ENSCSAVG00000008720	-	73	59.644	ENSGGOG00000013174	PRPF3	58	59.763	Gorilla_gorilla
ENSCSAVG00000008720	-	94	54.383	ENSHBUG00000003493	prpf3	80	54.204	Haplochromis_burtoni
ENSCSAVG00000008720	-	94	41.788	ENSHGLG00000016033	-	71	42.857	Heterocephalus_glaber_female
ENSCSAVG00000008720	-	94	54.792	ENSHGLG00000016569	PRPF3	83	54.035	Heterocephalus_glaber_female
ENSCSAVG00000008720	-	95	41.208	ENSHGLG00100008951	-	71	42.437	Heterocephalus_glaber_male
ENSCSAVG00000008720	-	94	54.792	ENSHGLG00100007590	PRPF3	83	54.035	Heterocephalus_glaber_male
ENSCSAVG00000008720	-	94	52.763	ENSHCOG00000014058	prpf3	79	52.585	Hippocampus_comes
ENSCSAVG00000008720	-	94	52.205	ENSIPUG00000000902	PRPF3	85	51.163	Ictalurus_punctatus
ENSCSAVG00000008720	-	94	54.792	ENSSTOG00000001889	PRPF3	83	54.035	Ictidomys_tridecemlineatus
ENSCSAVG00000008720	-	96	51.541	ENSKMAG00000001390	prpf3	85	52.030	Kryptolebias_marmoratus
ENSCSAVG00000008720	-	94	53.616	ENSLBEG00000026310	prpf3	85	55.413	Labrus_bergylta
ENSCSAVG00000008720	-	85	51.200	ENSLACG00000010541	PRPF3	78	51.200	Latimeria_chalumnae
ENSCSAVG00000008720	-	94	54.792	ENSLAFG00000004713	PRPF3	83	54.035	Loxodonta_africana
ENSCSAVG00000008720	-	94	54.792	ENSMFAG00000039791	PRPF3	83	54.035	Macaca_fascicularis
ENSCSAVG00000008720	-	81	55.741	ENSMMUG00000016301	PRPF3	78	54.839	Macaca_mulatta
ENSCSAVG00000008720	-	94	54.792	ENSMNEG00000038161	PRPF3	83	54.035	Macaca_nemestrina
ENSCSAVG00000008720	-	73	59.644	ENSMLEG00000040609	PRPF3	58	59.763	Mandrillus_leucophaeus
ENSCSAVG00000008720	-	93	38.172	ENSMLEG00000041065	-	68	38.923	Mandrillus_leucophaeus
ENSCSAVG00000008720	-	94	53.263	ENSMAMG00000014968	prpf3	85	54.446	Mastacembelus_armatus
ENSCSAVG00000008720	-	94	53.603	ENSMZEG00005015970	prpf3	76	57.741	Maylandia_zebra
ENSCSAVG00000008720	-	94	55.135	ENSMGAG00000000707	PRPF3	80	55.054	Meleagris_gallopavo
ENSCSAVG00000008720	-	94	54.792	ENSMAUG00000017112	Prpf3	83	54.116	Mesocricetus_auratus
ENSCSAVG00000008720	-	94	55.154	ENSMICG00000015386	PRPF3	99	55.474	Microcebus_murinus
ENSCSAVG00000008720	-	94	54.792	ENSMOCG00000000242	Prpf3	83	54.035	Microtus_ochrogaster
ENSCSAVG00000008720	-	94	48.682	ENSMMOG00000016131	prpf3	84	47.708	Mola_mola
ENSCSAVG00000008720	-	94	54.792	ENSMODG00000018774	PRPF3	83	54.035	Monodelphis_domestica
ENSCSAVG00000008720	-	94	54.122	ENSMALG00000007257	prpf3	79	54.480	Monopterus_albus
ENSCSAVG00000008720	-	94	54.973	MGP_CAROLIEiJ_G0025354	Prpf3	83	54.211	Mus_caroli
ENSCSAVG00000008720	-	94	54.973	ENSMUSG00000015748	Prpf3	83	54.211	Mus_musculus
ENSCSAVG00000008720	-	94	55.072	MGP_PahariEiJ_G0026798	Prpf3	83	54.306	Mus_pahari
ENSCSAVG00000008720	-	94	54.973	MGP_SPRETEiJ_G0026298	Prpf3	83	54.211	Mus_spretus
ENSCSAVG00000008720	-	94	53.526	ENSMPUG00000005080	PRPF3	83	52.807	Mustela_putorius_furo
ENSCSAVG00000008720	-	92	54.963	ENSMLUG00000004646	-	79	54.963	Myotis_lucifugus
ENSCSAVG00000008720	-	94	54.792	ENSNGAG00000000910	Prpf3	83	54.035	Nannospalax_galili
ENSCSAVG00000008720	-	94	52.513	ENSNBRG00000003462	prpf3	80	52.686	Neolamprologus_brichardi
ENSCSAVG00000008720	-	81	55.741	ENSNLEG00000009841	PRPF3	80	54.839	Nomascus_leucogenys
ENSCSAVG00000008720	-	81	49.852	ENSMEUG00000008733	PRPF3	78	49.852	Notamacropus_eugenii
ENSCSAVG00000008720	-	94	54.792	ENSOPRG00000010139	PRPF3	83	54.035	Ochotona_princeps
ENSCSAVG00000008720	-	94	54.955	ENSODEG00000011363	-	83	54.196	Octodon_degus
ENSCSAVG00000008720	-	94	43.841	ENSODEG00000014412	-	71	46.250	Octodon_degus
ENSCSAVG00000008720	-	94	53.779	ENSONIG00000006394	prpf3	80	53.603	Oreochromis_niloticus
ENSCSAVG00000008720	-	94	48.479	ENSOANG00000015441	PRPF3	80	48.208	Ornithorhynchus_anatinus
ENSCSAVG00000008720	-	94	54.792	ENSOCUG00000011760	PRPF3	83	54.035	Oryctolagus_cuniculus
ENSCSAVG00000008720	-	96	51.042	ENSORLG00000010330	prpf3	82	51.042	Oryzias_latipes
ENSCSAVG00000008720	-	96	51.042	ENSORLG00020009054	prpf3	82	51.042	Oryzias_latipes_hni
ENSCSAVG00000008720	-	96	51.042	ENSORLG00015015016	prpf3	82	51.042	Oryzias_latipes_hsok
ENSCSAVG00000008720	-	96	51.820	ENSOMEG00000000940	prpf3	85	53.125	Oryzias_melastigma
ENSCSAVG00000008720	-	94	51.625	ENSOGAG00000005352	PRPF3	83	50.963	Otolemur_garnettii
ENSCSAVG00000008720	-	94	54.792	ENSOARG00000020798	PRPF3	83	54.035	Ovis_aries
ENSCSAVG00000008720	-	92	44.096	ENSPPAG00000043769	-	71	46.203	Pan_paniscus
ENSCSAVG00000008720	-	94	54.891	ENSPPAG00000030983	PRPF3	83	54.130	Pan_paniscus
ENSCSAVG00000008720	-	94	54.792	ENSPPRG00000000731	PRPF3	83	54.035	Panthera_pardus
ENSCSAVG00000008720	-	94	54.792	ENSPTIG00000005516	PRPF3	83	54.035	Panthera_tigris_altaica
ENSCSAVG00000008720	-	92	43.358	ENSPTRG00000047819	-	71	45.359	Pan_troglodytes
ENSCSAVG00000008720	-	94	54.792	ENSPTRG00000001254	PRPF3	83	54.035	Pan_troglodytes
ENSCSAVG00000008720	-	94	54.792	ENSPANG00000000499	PRPF3	83	54.035	Papio_anubis
ENSCSAVG00000008720	-	94	55.556	ENSPKIG00000010501	prpf3	85	55.759	Paramormyrops_kingsleyae
ENSCSAVG00000008720	-	94	54.611	ENSPSIG00000014877	PRPF3	83	53.860	Pelodiscus_sinensis
ENSCSAVG00000008720	-	92	53.591	ENSPMGG00000007776	prpf3	85	53.591	Periophthalmus_magnuspinnatus
ENSCSAVG00000008720	-	94	54.792	ENSPEMG00000011672	Prpf3	83	54.035	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008720	-	74	58.716	ENSPMAG00000005588	prpf3	96	58.716	Petromyzon_marinus
ENSCSAVG00000008720	-	94	54.792	ENSPCIG00000008795	PRPF3	83	54.035	Phascolarctos_cinereus
ENSCSAVG00000008720	-	97	52.901	ENSPFOG00000013638	prpf3	83	52.901	Poecilia_formosa
ENSCSAVG00000008720	-	97	53.913	ENSPLAG00000018103	prpf3	82	53.739	Poecilia_latipinna
ENSCSAVG00000008720	-	97	54.087	ENSPMEG00000023546	prpf3	82	53.913	Poecilia_mexicana
ENSCSAVG00000008720	-	97	54.087	ENSPREG00000017216	prpf3	82	53.913	Poecilia_reticulata
ENSCSAVG00000008720	-	86	54.331	ENSPPYG00000000900	PRPF3	81	53.524	Pongo_abelii
ENSCSAVG00000008720	-	66	47.179	ENSPPYG00000018646	-	76	46.530	Pongo_abelii
ENSCSAVG00000008720	-	94	55.154	ENSPCAG00000014908	PRPF3	83	54.386	Procavia_capensis
ENSCSAVG00000008720	-	94	54.973	ENSPCOG00000013828	PRPF3	83	54.211	Propithecus_coquereli
ENSCSAVG00000008720	-	94	54.250	ENSPVAG00000013472	PRPF3	83	53.509	Pteropus_vampyrus
ENSCSAVG00000008720	-	94	54.204	ENSPNYG00000004279	prpf3	80	54.025	Pundamilia_nyererei
ENSCSAVG00000008720	-	94	51.820	ENSPNAG00000001799	prpf3	85	53.663	Pygocentrus_nattereri
ENSCSAVG00000008720	-	94	54.792	ENSRNOG00000025629	Prpf3	83	54.035	Rattus_norvegicus
ENSCSAVG00000008720	-	73	53.623	ENSRBIG00000028854	PRPF3	80	53.957	Rhinopithecus_bieti
ENSCSAVG00000008720	-	94	54.792	ENSRROG00000027464	PRPF3	83	54.035	Rhinopithecus_roxellana
ENSCSAVG00000008720	-	50	32.615	YDR473C	PRP3	68	32.827	Saccharomyces_cerevisiae
ENSCSAVG00000008720	-	94	49.548	ENSSBOG00000033104	PRPF3	82	48.947	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008720	-	94	54.611	ENSSHAG00000009548	PRPF3	83	53.860	Sarcophilus_harrisii
ENSCSAVG00000008720	-	97	52.764	ENSSFOG00015022014	prpf3	85	55.678	Scleropages_formosus
ENSCSAVG00000008720	-	97	52.020	ENSSMAG00000015739	prpf3	83	51.852	Scophthalmus_maximus
ENSCSAVG00000008720	-	94	52.909	ENSSDUG00000006840	prpf3	81	51.930	Seriola_dumerili
ENSCSAVG00000008720	-	94	53.819	ENSSLDG00000015423	prpf3	83	50.257	Seriola_lalandi_dorsalis
ENSCSAVG00000008720	-	94	54.792	ENSSARG00000011064	PRPF3	83	54.035	Sorex_araneus
ENSCSAVG00000008720	-	94	53.484	ENSSPUG00000000809	PRPF3	83	52.792	Sphenodon_punctatus
ENSCSAVG00000008720	-	94	53.534	ENSSPAG00000018721	prpf3	82	52.560	Stegastes_partitus
ENSCSAVG00000008720	-	94	54.792	ENSSSCG00000030119	PRPF3	99	55.109	Sus_scrofa
ENSCSAVG00000008720	-	92	49.091	ENSTGUG00000004552	PRPF3	69	51.789	Taeniopygia_guttata
ENSCSAVG00000008720	-	94	54.578	ENSTRUG00000014923	prpf3	81	54.219	Takifugu_rubripes
ENSCSAVG00000008720	-	94	53.710	ENSTNIG00000008058	prpf3	80	53.710	Tetraodon_nigroviridis
ENSCSAVG00000008720	-	76	55.682	ENSTBEG00000014072	PRPF3	69	56.136	Tupaia_belangeri
ENSCSAVG00000008720	-	94	49.548	ENSTTRG00000010616	PRPF3	83	48.947	Tursiops_truncatus
ENSCSAVG00000008720	-	93	55.109	ENSUAMG00000009345	PRPF3	99	55.109	Ursus_americanus
ENSCSAVG00000008720	-	94	54.792	ENSUMAG00000003720	PRPF3	83	54.035	Ursus_maritimus
ENSCSAVG00000008720	-	76	59.318	ENSVPAG00000005425	PRPF3	64	59.318	Vicugna_pacos
ENSCSAVG00000008720	-	94	54.792	ENSVVUG00000007933	PRPF3	83	54.035	Vulpes_vulpes
ENSCSAVG00000008720	-	94	53.846	ENSXETG00000018654	prpf3	84	53.002	Xenopus_tropicalis
ENSCSAVG00000008720	-	97	54.087	ENSXMAG00000016347	prpf3	84	55.083	Xiphophorus_maculatus