EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008721 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2274 bases
Position: chrreftig_9:575419-577692
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014895	DcpS_C	PF11969.8	2.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015069	-	466	-	ENSCSAVP00000014895	134 (aa)	-	H2ZBD0

Gene Model

Click here to download ENSCSAVG00000008721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008721	-	90	65.833	ENSCSAVG00000006544	-	71	65.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008721	-	93	61.600	ENSG00000137133	HINT2	77	61.600	Homo_sapiens
ENSCSAVG00000008721	-	91	67.213	ENSAPOG00000005822	hint2	91	71.818	Acanthochromis_polyacanthus
ENSCSAVG00000008721	-	93	61.600	ENSAMEG00000009919	HINT2	77	61.600	Ailuropoda_melanoleuca
ENSCSAVG00000008721	-	91	67.213	ENSACIG00000024176	hint2	79	67.213	Amphilophus_citrinellus
ENSCSAVG00000008721	-	91	65.574	ENSAOCG00000018892	hint2	95	65.574	Amphiprion_ocellaris
ENSCSAVG00000008721	-	91	65.574	ENSAPEG00000012800	hint2	79	65.574	Amphiprion_percula
ENSCSAVG00000008721	-	93	62.992	ENSATEG00000001240	hint2	80	62.992	Anabas_testudineus
ENSCSAVG00000008721	-	67	63.333	ENSACAG00000003036	HINT2	87	63.333	Anolis_carolinensis
ENSCSAVG00000008721	-	93	61.600	ENSANAG00000036887	HINT2	77	61.600	Aotus_nancymaae
ENSCSAVG00000008721	-	91	66.393	ENSACLG00000020144	hint2	85	66.393	Astatotilapia_calliptera
ENSCSAVG00000008721	-	94	62.016	ENSAMXG00000016137	hint2	78	62.016	Astyanax_mexicanus
ENSCSAVG00000008721	-	82	64.545	ENSBTAG00000011444	HINT2	83	61.600	Bos_taurus
ENSCSAVG00000008721	-	93	61.600	ENSCJAG00000010068	HINT2	77	61.600	Callithrix_jacchus
ENSCSAVG00000008721	-	93	61.600	ENSCAFG00000002240	HINT2	77	61.600	Canis_familiaris
ENSCSAVG00000008721	-	93	57.600	ENSCAFG00020017487	HINT2	76	57.600	Canis_lupus_dingo
ENSCSAVG00000008721	-	82	64.545	ENSCHIG00000010130	HINT2	77	61.600	Capra_hircus
ENSCSAVG00000008721	-	93	61.600	ENSTSYG00000030020	-	77	61.600	Carlito_syrichta
ENSCSAVG00000008721	-	93	58.400	ENSTSYG00000000640	-	79	58.400	Carlito_syrichta
ENSCSAVG00000008721	-	93	60.800	ENSCAPG00000007065	HINT2	84	60.800	Cavia_aperea
ENSCSAVG00000008721	-	93	60.800	ENSCPOG00000040327	HINT2	77	60.800	Cavia_porcellus
ENSCSAVG00000008721	-	93	61.600	ENSCCAG00000023291	HINT2	77	61.600	Cebus_capucinus
ENSCSAVG00000008721	-	93	61.600	ENSCATG00000033387	HINT2	77	61.600	Cercocebus_atys
ENSCSAVG00000008721	-	73	45.455	ENSCLAG00000013492	-	95	45.455	Chinchilla_lanigera
ENSCSAVG00000008721	-	93	62.400	ENSCLAG00000002682	-	77	62.400	Chinchilla_lanigera
ENSCSAVG00000008721	-	93	61.600	ENSCSAG00000010622	HINT2	77	61.600	Chlorocebus_sabaeus
ENSCSAVG00000008721	-	95	63.158	ENSCPBG00000002797	HINT2	99	63.158	Chrysemys_picta_bellii
ENSCSAVG00000008721	-	99	58.519	ENSCING00000011420	-	78	58.519	Ciona_intestinalis
ENSCSAVG00000008721	-	95	69.531	ENSCING00000023160	-	100	69.531	Ciona_intestinalis
ENSCSAVG00000008721	-	93	61.600	ENSCANG00000042118	HINT2	77	61.600	Colobus_angolensis_palliatus
ENSCSAVG00000008721	-	93	61.111	ENSCGRG00001022361	Hint2	77	61.111	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008721	-	93	61.111	ENSCGRG00000017831	Hint2	77	61.111	Cricetulus_griseus_crigri
ENSCSAVG00000008721	-	91	63.115	ENSCSEG00000018825	hint2	87	67.273	Cynoglossus_semilaevis
ENSCSAVG00000008721	-	95	66.142	ENSCSEG00000003930	hint1	100	66.142	Cynoglossus_semilaevis
ENSCSAVG00000008721	-	95	64.567	ENSCVAG00000013656	hint1	100	64.567	Cyprinodon_variegatus
ENSCSAVG00000008721	-	91	62.295	ENSCVAG00000015693	hint2	83	60.656	Cyprinodon_variegatus
ENSCSAVG00000008721	-	93	60.630	ENSDARG00000100938	hint2	79	60.630	Danio_rerio
ENSCSAVG00000008721	-	95	69.291	ENSDARG00000103824	hint1	100	69.291	Danio_rerio
ENSCSAVG00000008721	-	82	64.545	ENSDNOG00000009083	HINT2	77	61.600	Dasypus_novemcinctus
ENSCSAVG00000008721	-	93	61.600	ENSDORG00000006268	Hint2	77	61.600	Dipodomys_ordii
ENSCSAVG00000008721	-	96	64.062	FBgn0031459	CG2862	100	64.567	Drosophila_melanogaster
ENSCSAVG00000008721	-	82	62.727	ENSETEG00000017929	HINT2	77	59.200	Echinops_telfairi
ENSCSAVG00000008721	-	95	73.228	ENSEBUG00000015709	-	100	73.228	Eptatretus_burgeri
ENSCSAVG00000008721	-	99	51.799	ENSEBUG00000009253	hint2	81	51.799	Eptatretus_burgeri
ENSCSAVG00000008721	-	93	57.600	ENSEASG00005014042	HINT2	76	57.600	Equus_asinus_asinus
ENSCSAVG00000008721	-	82	60.000	ENSECAG00000000037	HINT2	76	57.600	Equus_caballus
ENSCSAVG00000008721	-	93	64.000	ENSEEUG00000011866	HINT2	92	64.000	Erinaceus_europaeus
ENSCSAVG00000008721	-	95	64.567	ENSELUG00000016515	hint1	100	64.567	Esox_lucius
ENSCSAVG00000008721	-	96	61.364	ENSELUG00000014618	HINT2	86	61.364	Esox_lucius
ENSCSAVG00000008721	-	93	60.800	ENSFCAG00000012755	HINT2	77	60.800	Felis_catus
ENSCSAVG00000008721	-	84	67.857	ENSFALG00000000137	HINT2	98	67.857	Ficedula_albicollis
ENSCSAVG00000008721	-	82	64.545	ENSFDAG00000007090	HINT2	77	61.600	Fukomys_damarensis
ENSCSAVG00000008721	-	100	61.194	ENSFHEG00000001761	hint1	75	61.194	Fundulus_heteroclitus
ENSCSAVG00000008721	-	91	65.574	ENSFHEG00000004041	hint2	66	65.574	Fundulus_heteroclitus
ENSCSAVG00000008721	-	95	64.567	ENSGMOG00000005105	hint1	100	64.567	Gadus_morhua
ENSCSAVG00000008721	-	93	63.780	ENSGALG00000027418	-	80	63.780	Gallus_gallus
ENSCSAVG00000008721	-	91	64.754	ENSGAFG00000016884	hint2	95	64.754	Gambusia_affinis
ENSCSAVG00000008721	-	95	64.567	ENSGAFG00000001228	hint1	100	64.567	Gambusia_affinis
ENSCSAVG00000008721	-	93	61.600	ENSGGOG00000011265	HINT2	77	61.600	Gorilla_gorilla
ENSCSAVG00000008721	-	91	66.393	ENSHBUG00000007106	hint2	85	66.393	Haplochromis_burtoni
ENSCSAVG00000008721	-	93	59.200	ENSHGLG00000018803	HINT2	77	59.200	Heterocephalus_glaber_female
ENSCSAVG00000008721	-	93	59.200	ENSHGLG00100009260	HINT2	77	59.200	Heterocephalus_glaber_male
ENSCSAVG00000008721	-	95	63.846	ENSHCOG00000008201	hint2	100	63.846	Hippocampus_comes
ENSCSAVG00000008721	-	95	63.780	ENSIPUG00000003460	hint1	100	63.780	Ictalurus_punctatus
ENSCSAVG00000008721	-	91	66.393	ENSIPUG00000015540	Hint2	73	66.393	Ictalurus_punctatus
ENSCSAVG00000008721	-	82	64.545	ENSSTOG00000006975	HINT2	77	61.600	Ictidomys_tridecemlineatus
ENSCSAVG00000008721	-	99	58.209	ENSJJAG00000005863	Hint2	90	58.209	Jaculus_jaculus
ENSCSAVG00000008721	-	94	59.690	ENSKMAG00000007624	hint2	93	59.690	Kryptolebias_marmoratus
ENSCSAVG00000008721	-	91	66.393	ENSLBEG00000026254	hint2	80	66.393	Labrus_bergylta
ENSCSAVG00000008721	-	93	61.538	ENSLACG00000013400	HINT2	94	58.519	Latimeria_chalumnae
ENSCSAVG00000008721	-	91	65.574	ENSLOCG00000011981	hint2	96	65.574	Lepisosteus_oculatus
ENSCSAVG00000008721	-	93	60.800	ENSLAFG00000015022	HINT2	77	60.800	Loxodonta_africana
ENSCSAVG00000008721	-	93	61.600	ENSMFAG00000034091	HINT2	77	61.600	Macaca_fascicularis
ENSCSAVG00000008721	-	93	61.600	ENSMMUG00000016337	HINT2	77	61.600	Macaca_mulatta
ENSCSAVG00000008721	-	93	61.600	ENSMNEG00000044230	HINT2	77	61.600	Macaca_nemestrina
ENSCSAVG00000008721	-	93	61.600	ENSMLEG00000029409	HINT2	92	61.600	Mandrillus_leucophaeus
ENSCSAVG00000008721	-	96	63.566	ENSMAMG00000006530	hint2	81	63.566	Mastacembelus_armatus
ENSCSAVG00000008721	-	91	66.393	ENSMZEG00005013690	hint2	85	66.393	Maylandia_zebra
ENSCSAVG00000008721	-	93	61.111	ENSMAUG00000008164	Hint2	77	61.111	Mesocricetus_auratus
ENSCSAVG00000008721	-	82	63.636	ENSMICG00000002572	HINT2	77	60.800	Microcebus_murinus
ENSCSAVG00000008721	-	93	61.111	ENSMOCG00000022371	Hint2	77	61.111	Microtus_ochrogaster
ENSCSAVG00000008721	-	91	64.754	ENSMMOG00000017956	hint2	67	64.754	Mola_mola
ENSCSAVG00000008721	-	95	66.929	ENSMMOG00000007854	hint1	100	66.929	Mola_mola
ENSCSAVG00000008721	-	93	60.800	ENSMODG00000006947	HINT2	98	60.800	Monodelphis_domestica
ENSCSAVG00000008721	-	95	62.992	ENSMALG00000001063	hint1	100	62.992	Monopterus_albus
ENSCSAVG00000008721	-	91	64.754	ENSMALG00000005121	hint2	74	64.754	Monopterus_albus
ENSCSAVG00000008721	-	93	60.800	MGP_CAROLIEiJ_G0025948	Hint2	77	60.800	Mus_caroli
ENSCSAVG00000008721	-	93	60.800	ENSMUSG00000028470	Hint2	77	60.800	Mus_musculus
ENSCSAVG00000008721	-	93	60.000	MGP_PahariEiJ_G0024093	Hint2	77	60.000	Mus_pahari
ENSCSAVG00000008721	-	93	60.800	MGP_SPRETEiJ_G0026909	Hint2	77	60.800	Mus_spretus
ENSCSAVG00000008721	-	93	56.000	ENSMPUG00000005589	HINT2	77	56.000	Mustela_putorius_furo
ENSCSAVG00000008721	-	93	60.800	ENSMLUG00000023856	HINT2	77	60.800	Myotis_lucifugus
ENSCSAVG00000008721	-	93	61.600	ENSNGAG00000003065	Hint2	77	61.600	Nannospalax_galili
ENSCSAVG00000008721	-	93	64.800	ENSNBRG00000022918	hint2	99	64.800	Neolamprologus_brichardi
ENSCSAVG00000008721	-	93	61.600	ENSNLEG00000033123	HINT2	77	61.600	Nomascus_leucogenys
ENSCSAVG00000008721	-	82	64.545	ENSODEG00000013829	HINT2	77	61.600	Octodon_degus
ENSCSAVG00000008721	-	93	61.600	ENSOCUG00000027206	-	75	61.600	Oryctolagus_cuniculus
ENSCSAVG00000008721	-	82	60.909	ENSOCUG00000006472	-	77	58.730	Oryctolagus_cuniculus
ENSCSAVG00000008721	-	93	64.000	ENSORLG00000001235	hint2	69	64.000	Oryzias_latipes
ENSCSAVG00000008721	-	96	62.791	ENSORLG00020009336	hint2	92	69.091	Oryzias_latipes_hni
ENSCSAVG00000008721	-	93	63.200	ENSORLG00015018872	hint2	92	68.182	Oryzias_latipes_hsok
ENSCSAVG00000008721	-	93	65.600	ENSOMEG00000012866	hint2	84	65.600	Oryzias_melastigma
ENSCSAVG00000008721	-	82	64.545	ENSOGAG00000011830	HINT2	77	61.600	Otolemur_garnettii
ENSCSAVG00000008721	-	82	64.545	ENSOARG00000011729	HINT2	77	61.600	Ovis_aries
ENSCSAVG00000008721	-	93	61.600	ENSPPAG00000002836	HINT2	77	61.600	Pan_paniscus
ENSCSAVG00000008721	-	82	63.636	ENSPPRG00000020701	HINT2	77	60.800	Panthera_pardus
ENSCSAVG00000008721	-	82	63.636	ENSPTIG00000015400	HINT2	81	60.800	Panthera_tigris_altaica
ENSCSAVG00000008721	-	93	61.600	ENSPTRG00000020923	HINT2	77	61.600	Pan_troglodytes
ENSCSAVG00000008721	-	93	61.600	ENSPANG00000025487	HINT2	77	61.600	Papio_anubis
ENSCSAVG00000008721	-	96	62.016	ENSPKIG00000024049	hint2	96	64.167	Paramormyrops_kingsleyae
ENSCSAVG00000008721	-	95	64.567	ENSPKIG00000021119	hint1	88	64.567	Paramormyrops_kingsleyae
ENSCSAVG00000008721	-	93	64.567	ENSPMGG00000006589	hint2	87	70.000	Periophthalmus_magnuspinnatus
ENSCSAVG00000008721	-	93	60.000	ENSPEMG00000014390	Hint2	77	60.000	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008721	-	93	59.231	ENSPMAG00000002715	hint2	75	59.231	Petromyzon_marinus
ENSCSAVG00000008721	-	96	58.594	ENSPMAG00000006075	hint1	87	58.594	Petromyzon_marinus
ENSCSAVG00000008721	-	74	41.667	ENSPCIG00000021660	-	63	41.463	Phascolarctos_cinereus
ENSCSAVG00000008721	-	95	62.992	ENSPFOG00000012020	hint1	100	62.992	Poecilia_formosa
ENSCSAVG00000008721	-	91	65.574	ENSPFOG00000007209	hint2	74	65.574	Poecilia_formosa
ENSCSAVG00000008721	-	91	65.574	ENSPLAG00000004768	hint2	90	70.000	Poecilia_latipinna
ENSCSAVG00000008721	-	95	62.205	ENSPLAG00000003800	hint1	100	62.205	Poecilia_latipinna
ENSCSAVG00000008721	-	91	65.574	ENSPMEG00000017523	hint2	73	65.574	Poecilia_mexicana
ENSCSAVG00000008721	-	95	62.992	ENSPMEG00000016327	hint1	100	62.992	Poecilia_mexicana
ENSCSAVG00000008721	-	91	65.574	ENSPREG00000008004	hint2	74	65.574	Poecilia_reticulata
ENSCSAVG00000008721	-	95	62.992	ENSPREG00000003867	hint1	100	62.992	Poecilia_reticulata
ENSCSAVG00000008721	-	93	60.800	ENSPPYG00000019082	HINT2	77	60.800	Pongo_abelii
ENSCSAVG00000008721	-	82	64.545	ENSPCOG00000023948	HINT2	77	61.600	Propithecus_coquereli
ENSCSAVG00000008721	-	93	60.800	ENSPVAG00000003028	HINT2	77	60.800	Pteropus_vampyrus
ENSCSAVG00000008721	-	91	66.393	ENSPNYG00000017024	hint2	95	66.393	Pundamilia_nyererei
ENSCSAVG00000008721	-	91	64.754	ENSPNAG00000029879	hint2	81	64.754	Pygocentrus_nattereri
ENSCSAVG00000008721	-	93	60.000	ENSRNOG00000015866	Hint2	77	60.000	Rattus_norvegicus
ENSCSAVG00000008721	-	93	61.600	ENSRBIG00000044870	HINT2	77	61.600	Rhinopithecus_bieti
ENSCSAVG00000008721	-	93	61.600	ENSRROG00000035123	HINT2	77	61.600	Rhinopithecus_roxellana
ENSCSAVG00000008721	-	96	59.231	ENSSBOG00000025840	HINT2	80	59.231	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008721	-	95	54.331	ENSSHAG00000012507	-	100	54.331	Sarcophilus_harrisii
ENSCSAVG00000008721	-	82	61.818	ENSSHAG00000013965	HINT2	91	59.200	Sarcophilus_harrisii
ENSCSAVG00000008721	-	85	60.526	ENSSFOG00015001540	hint2	70	60.526	Scleropages_formosus
ENSCSAVG00000008721	-	91	63.115	ENSSMAG00000008382	hint2	68	63.115	Scophthalmus_maximus
ENSCSAVG00000008721	-	91	68.033	ENSSDUG00000022415	hint2	68	68.033	Seriola_dumerili
ENSCSAVG00000008721	-	91	67.213	ENSSLDG00000004617	hint2	85	71.818	Seriola_lalandi_dorsalis
ENSCSAVG00000008721	-	91	65.574	ENSSPAG00000013723	hint2	65	65.574	Stegastes_partitus
ENSCSAVG00000008721	-	84	66.071	ENSTGUG00000001823	HINT2	98	66.071	Taeniopygia_guttata
ENSCSAVG00000008721	-	95	66.142	ENSTRUG00000009900	hint1	100	66.142	Takifugu_rubripes
ENSCSAVG00000008721	-	91	65.574	ENSTRUG00000023015	hint2	98	64.228	Takifugu_rubripes
ENSCSAVG00000008721	-	91	66.393	ENSTNIG00000015580	hint2	74	66.393	Tetraodon_nigroviridis
ENSCSAVG00000008721	-	93	61.600	ENSTBEG00000013020	HINT2	77	61.600	Tupaia_belangeri
ENSCSAVG00000008721	-	82	64.545	ENSTTRG00000011932	HINT2	77	61.600	Tursiops_truncatus
ENSCSAVG00000008721	-	93	60.800	ENSUAMG00000009907	HINT2	55	60.800	Ursus_americanus
ENSCSAVG00000008721	-	93	60.800	ENSUMAG00000007451	HINT2	74	60.800	Ursus_maritimus
ENSCSAVG00000008721	-	82	64.545	ENSVPAG00000005592	HINT2	77	61.600	Vicugna_pacos
ENSCSAVG00000008721	-	93	57.600	ENSVVUG00000020192	HINT2	51	57.600	Vulpes_vulpes
ENSCSAVG00000008721	-	70	53.000	ENSXETG00000005083	hint2	62	53.000	Xenopus_tropicalis
ENSCSAVG00000008721	-	91	65.574	ENSXCOG00000009621	hint2	86	70.000	Xiphophorus_couchianus
ENSCSAVG00000008721	-	91	64.754	ENSXMAG00000026925	hint2	77	64.754	Xiphophorus_maculatus
ENSCSAVG00000008721	-	95	64.567	ENSXMAG00000023903	hint1	100	64.567	Xiphophorus_maculatus