EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000008731 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
5544 bases
Position
chrreftig_11:1190848-1196391
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000014914GTP_EFTUPF00009.271.6e-2211
ENSCSAVP00000014913GTP_EFTUPF00009.271.4e-2111
ENSCSAVP00000014914GTP_EFTU_D2PF03144.251.3e-0911
ENSCSAVP00000014913GTP_EFTU_D2PF03144.252.6e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000015087-1879-ENSCSAVP00000014913511 (aa)-H2ZBE8
ENSCSAVT00000015088-1383-ENSCSAVP00000014914458 (aa)-H2ZBE9
Gene Model
Click here to download ENSCSAVG00000008731's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008731's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000008731-9943.182ENSCSAVG00000011264-9840.768
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000008731-9970.784ENSG00000100226GTPBP19662.162Homo_sapiens
ENSCSAVG00000008731-9970.000ENSAPOG00000012168gtpbp17670.000Acanthochromis_polyacanthus
ENSCSAVG00000008731-9970.196ENSAPOG00000006803gtpbp1l7870.196Acanthochromis_polyacanthus
ENSCSAVG00000008731-9970.784ENSAMEG00000010713GTPBP17570.784Ailuropoda_melanoleuca
ENSCSAVG00000008731-9870.530ENSACIG00000006450gtpbp17970.530Amphilophus_citrinellus
ENSCSAVG00000008731-9864.440ENSACIG00000018369gtpbp1l7764.258Amphilophus_citrinellus
ENSCSAVG00000008731-9970.196ENSAOCG00000018070gtpbp17670.196Amphiprion_ocellaris
ENSCSAVG00000008731-9772.527ENSAOCG00000017840gtpbp1l8070.196Amphiprion_ocellaris
ENSCSAVG00000008731-9970.588ENSAPEG00000008046gtpbp1l8070.588Amphiprion_percula
ENSCSAVG00000008731-9970.196ENSAPEG00000008015gtpbp17670.196Amphiprion_percula
ENSCSAVG00000008731-9970.392ENSATEG00000024804gtpbp17670.392Anabas_testudineus
ENSCSAVG00000008731-9872.687ENSATEG00000002110gtpbp1l8170.392Anabas_testudineus
ENSCSAVG00000008731-9970.646ENSAPLG00000014138GTPBP18370.646Anas_platyrhynchos
ENSCSAVG00000008731-9970.392ENSACAG00000008070GTPBP17370.392Anolis_carolinensis
ENSCSAVG00000008731-9970.784ENSANAG00000037524GTPBP17770.784Aotus_nancymaae
ENSCSAVG00000008731-9970.392ENSACLG00000009588gtpbp1l7870.392Astatotilapia_calliptera
ENSCSAVG00000008731-9970.392ENSACLG00000003178gtpbp17670.392Astatotilapia_calliptera
ENSCSAVG00000008731-9871.922ENSAMXG00000013159gtpbp1l8070.291Astyanax_mexicanus
ENSCSAVG00000008731-9970.784ENSAMXG00000014812gtpbp17870.784Astyanax_mexicanus
ENSCSAVG00000008731-9970.784ENSBTAG00000010324GTPBP18470.784Bos_taurus
ENSCSAVG00000008731-9853.411WBGene00000480cgp-18353.502Caenorhabditis_elegans
ENSCSAVG00000008731-9970.784ENSCJAG00000011652GTPBP17670.784Callithrix_jacchus
ENSCSAVG00000008731-9970.784ENSCAFG00000001377GTPBP17670.784Canis_familiaris
ENSCSAVG00000008731-9970.784ENSCAFG00020002751GTPBP17670.784Canis_lupus_dingo
ENSCSAVG00000008731-9970.784ENSCHIG00000015505GTPBP17670.784Capra_hircus
ENSCSAVG00000008731-9970.784ENSTSYG00000008856GTPBP17670.784Carlito_syrichta
ENSCSAVG00000008731-9870.809ENSCAPG00000007480GTPBP17970.784Cavia_aperea
ENSCSAVG00000008731-9970.784ENSCPOG00000007667GTPBP17670.784Cavia_porcellus
ENSCSAVG00000008731-9970.784ENSCCAG00000033843GTPBP17670.784Cebus_capucinus
ENSCSAVG00000008731-9970.784ENSCATG00000037701GTPBP17670.784Cercocebus_atys
ENSCSAVG00000008731-9970.784ENSCLAG00000016782GTPBP17670.784Chinchilla_lanigera
ENSCSAVG00000008731-9970.784ENSCSAG00000006496GTPBP17670.784Chlorocebus_sabaeus
ENSCSAVG00000008731-9871.586ENSCPBG00000022999GTPBP18270.000Chrysemys_picta_bellii
ENSCSAVG00000008731-9988.431ENSCING00000003314-8888.431Ciona_intestinalis
ENSCSAVG00000008731-9970.784ENSCANG00000037389GTPBP17670.784Colobus_angolensis_palliatus
ENSCSAVG00000008731-9970.784ENSCGRG00001016791Gtpbp17670.784Cricetulus_griseus_chok1gshd
ENSCSAVG00000008731-9970.784ENSCGRG00000004520Gtpbp18170.784Cricetulus_griseus_crigri
ENSCSAVG00000008731-9771.744ENSCSEG00000001459gtpbp1l8269.216Cynoglossus_semilaevis
ENSCSAVG00000008731-9970.784ENSCSEG00000013001gtpbp17770.784Cynoglossus_semilaevis
ENSCSAVG00000008731-9970.588ENSCVAG00000011475gtpbp17670.588Cyprinodon_variegatus
ENSCSAVG00000008731-9969.412ENSCVAG00000011819gtpbp1l7969.643Cyprinodon_variegatus
ENSCSAVG00000008731-9872.687ENSDARG00000042900gtpbp1l7870.392Danio_rerio
ENSCSAVG00000008731-9970.508ENSDARG00000053467gtpbp17770.508Danio_rerio
ENSCSAVG00000008731-9970.784ENSDNOG00000010901GTPBP17670.784Dasypus_novemcinctus
ENSCSAVG00000008731-9970.392ENSDORG00000015795Gtpbp17670.392Dipodomys_ordii
ENSCSAVG00000008731-9766.890FBgn0027836Dgp-17564.694Drosophila_melanogaster
ENSCSAVG00000008731-8966.748ENSETEG00000008972GTPBP17166.748Echinops_telfairi
ENSCSAVG00000008731-9969.412ENSEBUG00000006404gtpbp18572.511Eptatretus_burgeri
ENSCSAVG00000008731-9970.784ENSEASG00005018753GTPBP17670.784Equus_asinus_asinus
ENSCSAVG00000008731-9970.784ENSECAG00000018027GTPBP18170.784Equus_caballus
ENSCSAVG00000008731-8877.372ENSEEUG00000002454GTPBP17073.233Erinaceus_europaeus
ENSCSAVG00000008731-9970.588ENSELUG00000004553gtpbp17670.588Esox_lucius
ENSCSAVG00000008731-7660.056ENSELUG00000019995-7555.362Esox_lucius
ENSCSAVG00000008731-9970.784ENSFCAG00000010897GTPBP17670.784Felis_catus
ENSCSAVG00000008731-9970.588ENSFALG00000012474GTPBP18270.588Ficedula_albicollis
ENSCSAVG00000008731-9970.784ENSFDAG00000000554GTPBP17970.784Fukomys_damarensis
ENSCSAVG00000008731-9970.588ENSFHEG00000014632gtpbp18468.072Fundulus_heteroclitus
ENSCSAVG00000008731-7272.840ENSFHEG00000012700gtpbp1l6774.850Fundulus_heteroclitus
ENSCSAVG00000008731-6970.382ENSGMOG00000008454-9170.382Gadus_morhua
ENSCSAVG00000008731-9970.784ENSGALG00000030783GTPBP17670.784Gallus_gallus
ENSCSAVG00000008731-9970.000ENSGAFG00000018964gtpbp17670.000Gambusia_affinis
ENSCSAVG00000008731-9970.196ENSGAFG00000011374gtpbp1l8170.196Gambusia_affinis
ENSCSAVG00000008731-9969.412ENSGACG00000012617gtpbp17569.412Gasterosteus_aculeatus
ENSCSAVG00000008731-7775.676ENSGAGG00000019929GTPBP17075.676Gopherus_agassizii
ENSCSAVG00000008731-6577.365ENSGGOG00000038424-7677.365Gorilla_gorilla
ENSCSAVG00000008731-9970.392ENSHBUG00000008926-8070.392Haplochromis_burtoni
ENSCSAVG00000008731-9970.392ENSHBUG00000007773gtpbp17670.392Haplochromis_burtoni
ENSCSAVG00000008731-9970.980ENSHGLG00000010884GTPBP17670.980Heterocephalus_glaber_female
ENSCSAVG00000008731-9870.727ENSHGLG00100006950GTPBP17770.727Heterocephalus_glaber_male
ENSCSAVG00000008731-9970.196ENSHCOG00000005409gtpbp17770.196Hippocampus_comes
ENSCSAVG00000008731-9970.392ENSHCOG00000009605gtpbp1l8770.392Hippocampus_comes
ENSCSAVG00000008731-9970.784ENSIPUG00000013224gtpbp18270.923Ictalurus_punctatus
ENSCSAVG00000008731-9970.980ENSSTOG00000010766GTPBP18070.980Ictidomys_tridecemlineatus
ENSCSAVG00000008731-9970.784ENSJJAG00000011437Gtpbp17670.784Jaculus_jaculus
ENSCSAVG00000008731-9970.196ENSKMAG00000000729gtpbp17670.196Kryptolebias_marmoratus
ENSCSAVG00000008731-9969.804ENSKMAG00000011667gtpbp1l7669.804Kryptolebias_marmoratus
ENSCSAVG00000008731-9873.289ENSLBEG00000012322gtpbp1l8370.312Labrus_bergylta
ENSCSAVG00000008731-9969.608ENSLBEG00000017413gtpbp17669.608Labrus_bergylta
ENSCSAVG00000008731-9971.765ENSLOCG00000011287gtpbp1l7671.765Lepisosteus_oculatus
ENSCSAVG00000008731-9962.109ENSLAFG00000010667GTPBP18462.109Loxodonta_africana
ENSCSAVG00000008731-9970.784ENSMFAG00000037252GTPBP17670.784Macaca_fascicularis
ENSCSAVG00000008731-9970.784ENSMMUG00000007277GTPBP17670.784Macaca_mulatta
ENSCSAVG00000008731-9970.784ENSMNEG00000035572GTPBP17670.784Macaca_nemestrina
ENSCSAVG00000008731-9970.784ENSMLEG00000031750GTPBP17670.784Mandrillus_leucophaeus
ENSCSAVG00000008731-9969.804ENSMAMG00000023709gtpbp17669.804Mastacembelus_armatus
ENSCSAVG00000008731-9674.324ENSMAMG00000004504gtpbp1l7870.588Mastacembelus_armatus
ENSCSAVG00000008731-9970.392ENSMZEG00005012317gtpbp17670.392Maylandia_zebra
ENSCSAVG00000008731-9970.392ENSMZEG00005014218gtpbp1l7870.392Maylandia_zebra
ENSCSAVG00000008731-9969.216ENSMGAG00000012411GTPBP18369.020Meleagris_gallopavo
ENSCSAVG00000008731-9970.784ENSMICG00000034218GTPBP17670.784Microcebus_murinus
ENSCSAVG00000008731-9970.784ENSMOCG00000022043Gtpbp17670.784Microtus_ochrogaster
ENSCSAVG00000008731-9772.949ENSMMOG00000011119gtpbp1l7870.588Mola_mola
ENSCSAVG00000008731-9869.941ENSMMOG00000005017gtpbp18069.941Mola_mola
ENSCSAVG00000008731-9970.588ENSMODG00000009613GTPBP17670.588Monodelphis_domestica
ENSCSAVG00000008731-9970.196ENSMALG00000014627gtpbp1l7770.196Monopterus_albus
ENSCSAVG00000008731-9970.000ENSMALG00000019926gtpbp17770.000Monopterus_albus
ENSCSAVG00000008731-9970.784MGP_CAROLIEiJ_G0020023Gtpbp17670.784Mus_caroli
ENSCSAVG00000008731-9970.784ENSMUSG00000042535Gtpbp18664.228Mus_musculus
ENSCSAVG00000008731-9970.784MGP_PahariEiJ_G0020025Gtpbp17670.784Mus_pahari
ENSCSAVG00000008731-9970.784MGP_SPRETEiJ_G0020921Gtpbp17670.784Mus_spretus
ENSCSAVG00000008731-9970.784ENSMPUG00000013174GTPBP17670.784Mustela_putorius_furo
ENSCSAVG00000008731-9970.784ENSMLUG00000003767GTPBP17670.784Myotis_lucifugus
ENSCSAVG00000008731-9970.980ENSNGAG00000010065Gtpbp17670.980Nannospalax_galili
ENSCSAVG00000008731-9970.392ENSNBRG00000011770gtpbp1l7970.392Neolamprologus_brichardi
ENSCSAVG00000008731-9970.392ENSNBRG00000007080gtpbp17870.392Neolamprologus_brichardi
ENSCSAVG00000008731-8974.334ENSNLEG00000015164GTPBP17069.538Nomascus_leucogenys
ENSCSAVG00000008731-9965.422ENSMEUG00000015144GTPBP18565.422Notamacropus_eugenii
ENSCSAVG00000008731-9970.784ENSOPRG00000014827GTPBP17670.784Ochotona_princeps
ENSCSAVG00000008731-9970.784ENSODEG00000012443GTPBP17670.784Octodon_degus
ENSCSAVG00000008731-9970.392ENSONIG00000002088gtpbp17670.392Oreochromis_niloticus
ENSCSAVG00000008731-9970.196ENSONIG00000016913gtpbp1l7770.196Oreochromis_niloticus
ENSCSAVG00000008731-9953.551ENSOANG00000010579GTPBP19253.551Ornithorhynchus_anatinus
ENSCSAVG00000008731-9970.392ENSOCUG00000024468GTPBP17870.392Oryctolagus_cuniculus
ENSCSAVG00000008731-9970.392ENSORLG00000010742gtpbp18464.444Oryzias_latipes
ENSCSAVG00000008731-9970.392ENSORLG00020014602gtpbp17770.392Oryzias_latipes_hni
ENSCSAVG00000008731-9970.392ENSORLG00015004356gtpbp17670.392Oryzias_latipes_hsok
ENSCSAVG00000008731-9970.392ENSOMEG00000013252-8472.727Oryzias_melastigma
ENSCSAVG00000008731-9970.392ENSOMEG00000015651gtpbp1l8070.392Oryzias_melastigma
ENSCSAVG00000008731-9970.000ENSOGAG00000000514GTPBP17670.000Otolemur_garnettii
ENSCSAVG00000008731-9970.784ENSOARG00000015877GTPBP17670.784Ovis_aries
ENSCSAVG00000008731-9870.727ENSPPAG00000024682GTPBP17570.727Pan_paniscus
ENSCSAVG00000008731-9970.784ENSPPRG00000006069GTPBP17670.784Panthera_pardus
ENSCSAVG00000008731-9970.784ENSPTIG00000021742GTPBP17670.784Panthera_tigris_altaica
ENSCSAVG00000008731-9970.784ENSPTRG00000014376GTPBP17570.784Pan_troglodytes
ENSCSAVG00000008731-9970.784ENSPANG00000013808GTPBP17370.784Papio_anubis
ENSCSAVG00000008731-9970.588ENSPKIG00000005548gtpbp1l7770.588Paramormyrops_kingsleyae
ENSCSAVG00000008731-9970.000ENSPSIG00000004300GTPBP17570.000Pelodiscus_sinensis
ENSCSAVG00000008731-9970.196ENSPMGG00000022453gtpbp17770.196Periophthalmus_magnuspinnatus
ENSCSAVG00000008731-9970.019ENSPMGG00000018952gtpbp1l8270.019Periophthalmus_magnuspinnatus
ENSCSAVG00000008731-9970.784ENSPEMG00000022105Gtpbp17670.784Peromyscus_maniculatus_bairdii
ENSCSAVG00000008731-8977.482ENSPCIG00000015134GTPBP17673.291Phascolarctos_cinereus
ENSCSAVG00000008731-9873.128ENSPFOG00000013922gtpbp1l7870.059Poecilia_formosa
ENSCSAVG00000008731-9970.196ENSPFOG00000011239gtpbp17670.196Poecilia_formosa
ENSCSAVG00000008731-9872.907ENSPLAG00000007618-8270.392Poecilia_latipinna
ENSCSAVG00000008731-8976.998ENSPLAG00000017284gtpbp18473.810Poecilia_latipinna
ENSCSAVG00000008731-9970.196ENSPMEG00000019270gtpbp17970.196Poecilia_mexicana
ENSCSAVG00000008731-9873.128ENSPMEG00000018339-7870.196Poecilia_mexicana
ENSCSAVG00000008731-9970.000ENSPREG00000000559gtpbp17670.000Poecilia_reticulata
ENSCSAVG00000008731-9872.907ENSPREG00000000165gtpbp1l8070.392Poecilia_reticulata
ENSCSAVG00000008731-6476.949ENSPPYG00000012009-9977.027Pongo_abelii
ENSCSAVG00000008731-9970.784ENSPCOG00000028734GTPBP17670.784Propithecus_coquereli
ENSCSAVG00000008731-9970.588ENSPVAG00000010149GTPBP17670.588Pteropus_vampyrus
ENSCSAVG00000008731-9970.196ENSPNYG00000015449gtpbp1l8070.196Pundamilia_nyererei
ENSCSAVG00000008731-9970.392ENSPNYG00000012846gtpbp17870.392Pundamilia_nyererei
ENSCSAVG00000008731-9970.588ENSPNAG00000016079gtpbp17770.588Pygocentrus_nattereri
ENSCSAVG00000008731-9970.784ENSRNOG00000014634Gtpbp17670.784Rattus_norvegicus
ENSCSAVG00000008731-9970.784ENSRBIG00000031386GTPBP17570.784Rhinopithecus_bieti
ENSCSAVG00000008731-9970.784ENSRROG00000044733GTPBP17670.784Rhinopithecus_roxellana
ENSCSAVG00000008731-9970.784ENSSBOG00000029683GTPBP18070.784Saimiri_boliviensis_boliviensis
ENSCSAVG00000008731-8977.295ENSSHAG00000015800GTPBP18470.816Sarcophilus_harrisii
ENSCSAVG00000008731-9970.980ENSSFOG00015004705gtpbp17670.980Scleropages_formosus
ENSCSAVG00000008731-9970.000ENSSMAG00000011143gtpbp18370.138Scophthalmus_maximus
ENSCSAVG00000008731-9969.276ENSSMAG00000021142gtpbp1l8869.276Scophthalmus_maximus
ENSCSAVG00000008731-9970.000ENSSDUG00000000925gtpbp17670.000Seriola_dumerili
ENSCSAVG00000008731-9871.806ENSSDUG00000012562gtpbp1l7770.196Seriola_dumerili
ENSCSAVG00000008731-9970.000ENSSLDG00000009033gtpbp17770.000Seriola_lalandi_dorsalis
ENSCSAVG00000008731-9772.345ENSSLDG00000020573gtpbp1l7970.196Seriola_lalandi_dorsalis
ENSCSAVG00000008731-9970.000ENSSPUG00000011073GTPBP17470.000Sphenodon_punctatus
ENSCSAVG00000008731-9970.000ENSSPAG00000000971gtpbp17670.000Stegastes_partitus
ENSCSAVG00000008731-9970.392ENSSPAG00000006728-8070.530Stegastes_partitus
ENSCSAVG00000008731-9970.784ENSSSCG00000000095GTPBP18374.026Sus_scrofa
ENSCSAVG00000008731-9970.588ENSTGUG00000010342GTPBP17670.588Taeniopygia_guttata
ENSCSAVG00000008731-9970.588ENSTRUG00000007112gtpbp17470.588Takifugu_rubripes
ENSCSAVG00000008731-9970.000ENSTRUG00000011622gtpbp1l7870.000Takifugu_rubripes
ENSCSAVG00000008731-9970.196ENSTNIG00000018814gtpbp1l7870.196Tetraodon_nigroviridis
ENSCSAVG00000008731-9970.841ENSTNIG00000012630gtpbp17670.841Tetraodon_nigroviridis
ENSCSAVG00000008731-9970.784ENSTTRG00000005629GTPBP17670.784Tursiops_truncatus
ENSCSAVG00000008731-9370.417ENSUAMG00000011635-10070.417Ursus_americanus
ENSCSAVG00000008731-9970.784ENSUMAG00000014480GTPBP18270.784Ursus_maritimus
ENSCSAVG00000008731-9970.784ENSVVUG00000022607GTPBP17670.784Vulpes_vulpes
ENSCSAVG00000008731-9970.000ENSXETG00000006894gtpbp17870.000Xenopus_tropicalis
ENSCSAVG00000008731-9970.254ENSXCOG00000015928gtpbp1l8270.254Xiphophorus_couchianus
ENSCSAVG00000008731-9970.196ENSXMAG00000014069gtpbp17870.196Xiphophorus_maculatus
ENSCSAVG00000008731-9872.907ENSXMAG00000010002gtpbp1l8970.254Xiphophorus_maculatus

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