EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008738 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6230 bases
Position: chrreftig_30:2460850-2467079
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014924	TROVE	PF05731.11	7.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015099	-	1479	-	ENSCSAVP00000014925	232 (aa)	-	H2ZBG0
ENSCSAVT00000015098	-	1049	-	ENSCSAVP00000014924	315 (aa)	-	H2ZBF9

Gene Model

Click here to download ENSCSAVG00000008738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008738's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008738	-	99	34.076	ENSG00000116747	RO60	98	36.641	Homo_sapiens
ENSCSAVG00000008738	-	99	34.395	ENSAMEG00000015881	TROVE2	58	34.395	Ailuropoda_melanoleuca
ENSCSAVG00000008738	-	99	32.803	ENSAPLG00000003121	TROVE2	58	32.803	Anas_platyrhynchos
ENSCSAVG00000008738	-	99	33.651	ENSACAG00000008263	TROVE2	58	33.651	Anolis_carolinensis
ENSCSAVG00000008738	-	99	33.758	ENSANAG00000027305	TROVE2	58	33.758	Aotus_nancymaae
ENSCSAVG00000008738	-	98	32.692	ENSAMXG00000002118	trove2	57	32.692	Astyanax_mexicanus
ENSCSAVG00000008738	-	99	34.076	ENSCJAG00000008566	TROVE2	58	34.076	Callithrix_jacchus
ENSCSAVG00000008738	-	99	34.395	ENSCAFG00000010552	TROVE2	56	34.395	Canis_familiaris
ENSCSAVG00000008738	-	99	34.395	ENSCAFG00020004457	TROVE2	59	34.395	Canis_lupus_dingo
ENSCSAVG00000008738	-	99	34.076	ENSCHIG00000018260	TROVE2	58	34.076	Capra_hircus
ENSCSAVG00000008738	-	99	33.758	ENSTSYG00000004227	TROVE2	58	33.758	Carlito_syrichta
ENSCSAVG00000008738	-	81	46.465	ENSCCAG00000027978	TROVE2	51	46.465	Cebus_capucinus
ENSCSAVG00000008738	-	99	33.758	ENSCATG00000027732	TROVE2	58	33.758	Cercocebus_atys
ENSCSAVG00000008738	-	99	33.121	ENSCLAG00000016391	TROVE2	58	33.121	Chinchilla_lanigera
ENSCSAVG00000008738	-	99	34.076	ENSCSAG00000013402	TROVE2	58	34.076	Chlorocebus_sabaeus
ENSCSAVG00000008738	-	86	36.029	ENSCHOG00000009571	TROVE2	50	36.029	Choloepus_hoffmanni
ENSCSAVG00000008738	-	99	33.121	ENSCPBG00000010558	TROVE2	58	33.121	Chrysemys_picta_bellii
ENSCSAVG00000008738	-	99	34.076	ENSCANG00000041293	TROVE2	58	34.076	Colobus_angolensis_palliatus
ENSCSAVG00000008738	-	99	34.395	ENSCGRG00001016925	Trove2	58	34.395	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008738	-	99	34.395	ENSCGRG00000003396	Trove2	58	34.395	Cricetulus_griseus_crigri
ENSCSAVG00000008738	-	99	34.076	ENSDNOG00000002157	TROVE2	58	34.076	Dasypus_novemcinctus
ENSCSAVG00000008738	-	99	34.076	ENSDORG00000006152	Trove2	58	34.076	Dipodomys_ordii
ENSCSAVG00000008738	-	99	32.484	ENSETEG00000018261	TROVE2	90	32.484	Echinops_telfairi
ENSCSAVG00000008738	-	99	33.758	ENSEASG00005003388	TROVE2	58	33.758	Equus_asinus_asinus
ENSCSAVG00000008738	-	99	33.758	ENSECAG00000018653	TROVE2	58	33.758	Equus_caballus
ENSCSAVG00000008738	-	99	33.121	ENSEEUG00000014190	TROVE2	58	33.121	Erinaceus_europaeus
ENSCSAVG00000008738	-	99	33.758	ENSFCAG00000010161	TROVE2	58	33.758	Felis_catus
ENSCSAVG00000008738	-	98	33.441	ENSFALG00000002913	TROVE2	58	33.441	Ficedula_albicollis
ENSCSAVG00000008738	-	99	33.121	ENSFDAG00000015923	TROVE2	58	33.121	Fukomys_damarensis
ENSCSAVG00000008738	-	99	33.439	ENSGALG00000002504	TROVE2	58	33.439	Gallus_gallus
ENSCSAVG00000008738	-	99	32.803	ENSGAGG00000017742	TROVE2	58	32.803	Gopherus_agassizii
ENSCSAVG00000008738	-	99	34.076	ENSGGOG00000034815	TROVE2	58	34.076	Gorilla_gorilla
ENSCSAVG00000008738	-	99	33.121	ENSHGLG00000003152	TROVE2	58	33.121	Heterocephalus_glaber_female
ENSCSAVG00000008738	-	99	33.121	ENSHGLG00100010586	TROVE2	58	33.121	Heterocephalus_glaber_male
ENSCSAVG00000008738	-	98	32.907	ENSIPUG00000011780	trove2	58	32.907	Ictalurus_punctatus
ENSCSAVG00000008738	-	99	34.076	ENSJJAG00000019489	Trove2	58	34.076	Jaculus_jaculus
ENSCSAVG00000008738	-	99	33.758	ENSLACG00000007822	TROVE2	57	33.758	Latimeria_chalumnae
ENSCSAVG00000008738	-	99	32.381	ENSLOCG00000007384	trove2	58	32.698	Lepisosteus_oculatus
ENSCSAVG00000008738	-	99	34.076	ENSLAFG00000014808	TROVE2	58	34.076	Loxodonta_africana
ENSCSAVG00000008738	-	99	34.076	ENSMFAG00000016020	TROVE2	58	34.076	Macaca_fascicularis
ENSCSAVG00000008738	-	95	34.551	ENSMMUG00000022643	TROVE2	98	36.641	Macaca_mulatta
ENSCSAVG00000008738	-	99	34.076	ENSMNEG00000039348	TROVE2	58	34.076	Macaca_nemestrina
ENSCSAVG00000008738	-	99	33.758	ENSMLEG00000040042	TROVE2	58	33.758	Mandrillus_leucophaeus
ENSCSAVG00000008738	-	99	33.758	ENSMGAG00000005429	TROVE2	58	33.758	Meleagris_gallopavo
ENSCSAVG00000008738	-	99	35.032	ENSMAUG00000008125	Trove2	58	35.032	Mesocricetus_auratus
ENSCSAVG00000008738	-	99	34.076	ENSMICG00000011506	TROVE2	58	34.076	Microcebus_murinus
ENSCSAVG00000008738	-	99	34.395	ENSMOCG00000021175	Trove2	58	34.395	Microtus_ochrogaster
ENSCSAVG00000008738	-	99	34.395	ENSMODG00000012203	TROVE2	58	34.395	Monodelphis_domestica
ENSCSAVG00000008738	-	99	33.758	MGP_CAROLIEiJ_G0014676	Trove2	58	33.758	Mus_caroli
ENSCSAVG00000008738	-	99	33.758	ENSMUSG00000018199	Trove2	58	33.758	Mus_musculus
ENSCSAVG00000008738	-	99	33.758	MGP_PahariEiJ_G0027912	Trove2	53	33.758	Mus_pahari
ENSCSAVG00000008738	-	99	33.758	MGP_SPRETEiJ_G0015483	Trove2	58	33.758	Mus_spretus
ENSCSAVG00000008738	-	99	34.395	ENSMPUG00000004631	TROVE2	58	34.395	Mustela_putorius_furo
ENSCSAVG00000008738	-	99	34.076	ENSMLUG00000001442	TROVE2	58	34.076	Myotis_lucifugus
ENSCSAVG00000008738	-	99	32.803	ENSNGAG00000015898	Trove2	58	32.803	Nannospalax_galili
ENSCSAVG00000008738	-	99	34.395	ENSNLEG00000018048	TROVE2	58	34.395	Nomascus_leucogenys
ENSCSAVG00000008738	-	99	33.121	ENSODEG00000010468	TROVE2	58	33.121	Octodon_degus
ENSCSAVG00000008738	-	99	34.076	ENSOANG00000002961	TROVE2	58	34.076	Ornithorhynchus_anatinus
ENSCSAVG00000008738	-	99	32.803	ENSOCUG00000012814	TROVE2	58	32.803	Oryctolagus_cuniculus
ENSCSAVG00000008738	-	83	31.179	ENSORLG00020009759	trove2	98	31.179	Oryzias_latipes_hni
ENSCSAVG00000008738	-	95	35.216	ENSOGAG00000032047	TROVE2	56	35.216	Otolemur_garnettii
ENSCSAVG00000008738	-	99	34.076	ENSOARG00000009462	TROVE2	56	34.076	Ovis_aries
ENSCSAVG00000008738	-	99	33.758	ENSPPAG00000043846	TROVE2	58	33.758	Pan_paniscus
ENSCSAVG00000008738	-	99	33.758	ENSPPRG00000017233	TROVE2	58	33.758	Panthera_pardus
ENSCSAVG00000008738	-	99	33.758	ENSPTIG00000015535	TROVE2	58	33.758	Panthera_tigris_altaica
ENSCSAVG00000008738	-	99	34.076	ENSPTRG00000001794	TROVE2	58	34.076	Pan_troglodytes
ENSCSAVG00000008738	-	99	33.758	ENSPANG00000000341	TROVE2	58	33.758	Papio_anubis
ENSCSAVG00000008738	-	99	30.284	ENSPKIG00000018217	trove2	60	30.284	Paramormyrops_kingsleyae
ENSCSAVG00000008738	-	99	32.484	ENSPSIG00000009877	TROVE2	58	32.484	Pelodiscus_sinensis
ENSCSAVG00000008738	-	99	34.395	ENSPEMG00000001419	Trove2	58	34.395	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008738	-	99	35.032	ENSPCIG00000028632	TROVE2	58	35.032	Phascolarctos_cinereus
ENSCSAVG00000008738	-	99	34.076	ENSPPYG00000000397	TROVE2	58	34.076	Pongo_abelii
ENSCSAVG00000008738	-	99	34.395	ENSPCAG00000003959	TROVE2	58	34.395	Procavia_capensis
ENSCSAVG00000008738	-	83	35.115	ENSPCOG00000015454	-	98	35.115	Propithecus_coquereli
ENSCSAVG00000008738	-	99	34.076	ENSPCOG00000015951	-	58	34.076	Propithecus_coquereli
ENSCSAVG00000008738	-	83	30.038	ENSPVAG00000001182	TROVE2	54	30.038	Pteropus_vampyrus
ENSCSAVG00000008738	-	98	33.013	ENSPNAG00000024223	trove2	57	33.333	Pygocentrus_nattereri
ENSCSAVG00000008738	-	99	32.803	ENSRNOG00000003434	Trove2	58	32.803	Rattus_norvegicus
ENSCSAVG00000008738	-	99	34.076	ENSRBIG00000030073	TROVE2	58	34.076	Rhinopithecus_bieti
ENSCSAVG00000008738	-	99	34.076	ENSRROG00000034428	TROVE2	58	34.076	Rhinopithecus_roxellana
ENSCSAVG00000008738	-	99	34.076	ENSSBOG00000024070	TROVE2	58	34.076	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008738	-	99	34.395	ENSSHAG00000013205	TROVE2	58	34.395	Sarcophilus_harrisii
ENSCSAVG00000008738	-	99	30.625	ENSSFOG00015011990	trove2	57	30.625	Scleropages_formosus
ENSCSAVG00000008738	-	99	34.395	ENSSARG00000009347	TROVE2	58	34.395	Sorex_araneus
ENSCSAVG00000008738	-	99	31.847	ENSSPUG00000014304	TROVE2	97	34.749	Sphenodon_punctatus
ENSCSAVG00000008738	-	99	33.758	ENSSSCG00000032055	TROVE2	58	33.758	Sus_scrofa
ENSCSAVG00000008738	-	99	33.439	ENSTGUG00000004126	TROVE2	61	33.439	Taeniopygia_guttata
ENSCSAVG00000008738	-	83	31.939	ENSTBEG00000006806	TROVE2	54	31.939	Tupaia_belangeri
ENSCSAVG00000008738	-	99	33.758	ENSTTRG00000009291	TROVE2	58	33.758	Tursiops_truncatus
ENSCSAVG00000008738	-	99	34.713	ENSUAMG00000013365	TROVE2	58	34.713	Ursus_americanus
ENSCSAVG00000008738	-	99	34.395	ENSUMAG00000020464	TROVE2	58	34.395	Ursus_maritimus
ENSCSAVG00000008738	-	99	30.892	ENSXETG00000017224	trove2	58	30.892	Xenopus_tropicalis