EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008777 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3838 bases
Position: chrreftig_156:301176-305013
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014989	Ribosom_S12_S23	PF00164.25	4.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015163	-	773	-	ENSCSAVP00000014989	190 (aa)	-	H2ZBM4

Gene Model

Click here to download ENSCSAVG00000008777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008777	-	69	48.092	ENSG00000128626	MRPS12	92	48.092	Homo_sapiens
ENSCSAVG00000008777	-	52	60.606	ENSAPOG00000005047	si:dkey-17e16.10	69	60.606	Acanthochromis_polyacanthus
ENSCSAVG00000008777	-	73	45.455	ENSAMEG00000008722	MRPS12	98	46.853	Ailuropoda_melanoleuca
ENSCSAVG00000008777	-	52	60.606	ENSACIG00000016095	si:dkey-17e16.10	69	60.606	Amphilophus_citrinellus
ENSCSAVG00000008777	-	52	61.616	ENSAOCG00000018530	si:dkey-17e16.10	69	61.616	Amphiprion_ocellaris
ENSCSAVG00000008777	-	52	62.626	ENSAPEG00000019785	si:dkey-17e16.10	69	62.626	Amphiprion_percula
ENSCSAVG00000008777	-	52	62.626	ENSATEG00000018924	si:dkey-17e16.10	69	62.626	Anabas_testudineus
ENSCSAVG00000008777	-	72	47.101	ENSANAG00000033654	MRPS12	97	47.101	Aotus_nancymaae
ENSCSAVG00000008777	-	87	43.636	ENSACLG00000013979	si:dkey-17e16.10	95	43.636	Astatotilapia_calliptera
ENSCSAVG00000008777	-	60	56.140	ENSAMXG00000025945	si:dkey-17e16.10	74	56.140	Astyanax_mexicanus
ENSCSAVG00000008777	-	70	49.635	ENSBTAG00000001782	MRPS12	94	49.635	Bos_taurus
ENSCSAVG00000008777	-	52	53.061	WBGene00011391	mrps-12	62	53.061	Caenorhabditis_elegans
ENSCSAVG00000008777	-	70	49.254	ENSCJAG00000043176	MRPS12	94	49.254	Callithrix_jacchus
ENSCSAVG00000008777	-	70	50.746	ENSCHIG00000013852	MRPS12	94	50.746	Capra_hircus
ENSCSAVG00000008777	-	70	50.746	ENSTSYG00000009568	MRPS12	95	50.746	Carlito_syrichta
ENSCSAVG00000008777	-	73	48.571	ENSCPOG00000035217	MRPS12	98	48.571	Cavia_porcellus
ENSCSAVG00000008777	-	70	49.254	ENSCCAG00000035388	MRPS12	95	49.254	Cebus_capucinus
ENSCSAVG00000008777	-	70	50.000	ENSCATG00000038438	MRPS12	94	50.000	Cercocebus_atys
ENSCSAVG00000008777	-	72	49.275	ENSCLAG00000013286	MRPS12	97	49.275	Chinchilla_lanigera
ENSCSAVG00000008777	-	70	50.000	ENSCSAG00000003929	MRPS12	94	50.000	Chlorocebus_sabaeus
ENSCSAVG00000008777	-	100	65.464	ENSCING00000014236	-	100	65.464	Ciona_intestinalis
ENSCSAVG00000008777	-	70	50.000	ENSCANG00000003652	MRPS12	94	50.000	Colobus_angolensis_palliatus
ENSCSAVG00000008777	-	70	51.493	ENSCGRG00001018968	Mrps12	94	51.493	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008777	-	70	51.493	ENSCGRG00000007113	Mrps12	94	51.493	Cricetulus_griseus_crigri
ENSCSAVG00000008777	-	52	62.245	ENSCSEG00000001174	si:dkey-17e16.10	69	62.245	Cynoglossus_semilaevis
ENSCSAVG00000008777	-	85	43.827	ENSCVAG00000003253	si:dkey-17e16.10	98	43.827	Cyprinodon_variegatus
ENSCSAVG00000008777	-	70	50.000	ENSDORG00000001544	Mrps12	94	50.000	Dipodomys_ordii
ENSCSAVG00000008777	-	68	50.388	ENSETEG00000017985	MRPS12	90	50.388	Echinops_telfairi
ENSCSAVG00000008777	-	51	56.701	ENSFALG00000015276	MRPS12	83	56.842	Ficedula_albicollis
ENSCSAVG00000008777	-	73	48.921	ENSFDAG00000008482	MRPS12	98	48.921	Fukomys_damarensis
ENSCSAVG00000008777	-	52	60.606	ENSFHEG00000004575	si:dkey-17e16.10	70	60.606	Fundulus_heteroclitus
ENSCSAVG00000008777	-	52	61.224	ENSGMOG00000020611	si:dkey-17e16.10	88	61.224	Gadus_morhua
ENSCSAVG00000008777	-	52	61.616	ENSGAFG00000007521	si:dkey-17e16.10	70	61.616	Gambusia_affinis
ENSCSAVG00000008777	-	70	49.254	ENSGGOG00000002500	MRPS12	95	49.254	Gorilla_gorilla
ENSCSAVG00000008777	-	52	60.606	ENSHBUG00000014480	si:dkey-17e16.10	70	60.606	Haplochromis_burtoni
ENSCSAVG00000008777	-	70	50.746	ENSHGLG00000014942	MRPS12	94	50.746	Heterocephalus_glaber_female
ENSCSAVG00000008777	-	70	50.746	ENSHGLG00100017710	MRPS12	94	50.746	Heterocephalus_glaber_male
ENSCSAVG00000008777	-	52	63.265	ENSHCOG00000010444	si:dkey-17e16.10	65	63.265	Hippocampus_comes
ENSCSAVG00000008777	-	52	61.616	ENSIPUG00000024651	MRPS12	69	61.616	Ictalurus_punctatus
ENSCSAVG00000008777	-	72	49.275	ENSSTOG00000009006	MRPS12	97	49.275	Ictidomys_tridecemlineatus
ENSCSAVG00000008777	-	52	61.616	ENSKMAG00000007949	si:dkey-17e16.10	63	61.616	Kryptolebias_marmoratus
ENSCSAVG00000008777	-	52	60.606	ENSLBEG00000001112	si:dkey-17e16.10	71	60.606	Labrus_bergylta
ENSCSAVG00000008777	-	94	41.667	ENSLACG00000018393	MRPS12	98	42.778	Latimeria_chalumnae
ENSCSAVG00000008777	-	52	60.606	ENSLOCG00000000535	si:dkey-17e16.10	68	60.606	Lepisosteus_oculatus
ENSCSAVG00000008777	-	70	50.746	ENSMFAG00000044563	MRPS12	94	50.746	Macaca_fascicularis
ENSCSAVG00000008777	-	70	50.000	ENSMNEG00000040379	MRPS12	94	50.000	Macaca_nemestrina
ENSCSAVG00000008777	-	70	50.000	ENSMLEG00000036963	MRPS12	94	50.000	Mandrillus_leucophaeus
ENSCSAVG00000008777	-	52	62.626	ENSMAMG00000017962	si:dkey-17e16.10	71	62.626	Mastacembelus_armatus
ENSCSAVG00000008777	-	52	60.606	ENSMZEG00005017336	si:dkey-17e16.10	69	60.606	Maylandia_zebra
ENSCSAVG00000008777	-	52	46.000	ENSMAUG00000019146	Mrps12	94	46.000	Mesocricetus_auratus
ENSCSAVG00000008777	-	70	48.507	ENSMICG00000045111	MRPS12	94	48.507	Microcebus_murinus
ENSCSAVG00000008777	-	52	59.596	ENSMOCG00000012666	Mrps12	74	59.596	Microtus_ochrogaster
ENSCSAVG00000008777	-	59	57.522	ENSMMOG00000010803	si:dkey-17e16.10	76	57.522	Mola_mola
ENSCSAVG00000008777	-	52	60.204	MGP_PahariEiJ_G0012691	Mrps12	74	60.215	Mus_pahari
ENSCSAVG00000008777	-	72	47.826	ENSMLUG00000006076	MRPS12	97	47.826	Myotis_lucifugus
ENSCSAVG00000008777	-	52	60.606	ENSNBRG00000007244	si:dkey-17e16.10	69	60.606	Neolamprologus_brichardi
ENSCSAVG00000008777	-	84	42.857	ENSODEG00000016161	MRPS12	98	42.857	Octodon_degus
ENSCSAVG00000008777	-	52	60.606	ENSONIG00000002022	si:dkey-17e16.10	69	60.606	Oreochromis_niloticus
ENSCSAVG00000008777	-	52	61.616	ENSORLG00000007040	si:dkey-17e16.10	71	61.616	Oryzias_latipes
ENSCSAVG00000008777	-	52	61.616	ENSORLG00020011268	MRPS12	71	61.616	Oryzias_latipes_hni
ENSCSAVG00000008777	-	52	61.616	ENSORLG00015009378	MRPS12	71	61.616	Oryzias_latipes_hsok
ENSCSAVG00000008777	-	52	61.616	ENSOMEG00000001427	si:dkey-17e16.10	71	61.616	Oryzias_melastigma
ENSCSAVG00000008777	-	78	46.667	ENSOGAG00000008295	-	96	46.667	Otolemur_garnettii
ENSCSAVG00000008777	-	72	44.928	ENSOGAG00000025634	-	92	44.928	Otolemur_garnettii
ENSCSAVG00000008777	-	70	50.746	ENSOARG00000005927	MRPS12	94	50.746	Ovis_aries
ENSCSAVG00000008777	-	70	49.254	ENSPPAG00000041637	MRPS12	95	49.254	Pan_paniscus
ENSCSAVG00000008777	-	70	49.254	ENSPTRG00000010948	MRPS12	95	49.254	Pan_troglodytes
ENSCSAVG00000008777	-	70	49.254	ENSPANG00000021673	MRPS12	94	49.254	Papio_anubis
ENSCSAVG00000008777	-	70	50.746	ENSPEMG00000016700	Mrps12	94	50.746	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008777	-	55	57.143	ENSPCIG00000010531	-	73	57.143	Phascolarctos_cinereus
ENSCSAVG00000008777	-	71	50.000	ENSPFOG00000018863	si:dkey-17e16.10	97	50.000	Poecilia_formosa
ENSCSAVG00000008777	-	71	50.000	ENSPLAG00000008933	si:dkey-17e16.10	97	50.000	Poecilia_latipinna
ENSCSAVG00000008777	-	59	55.752	ENSPMEG00000005155	si:dkey-17e16.10	75	55.752	Poecilia_mexicana
ENSCSAVG00000008777	-	71	50.725	ENSPREG00000014123	si:dkey-17e16.10	93	50.725	Poecilia_reticulata
ENSCSAVG00000008777	-	70	49.254	ENSPPYG00000009950	MRPS12	95	49.254	Pongo_abelii
ENSCSAVG00000008777	-	70	50.746	ENSPCAG00000010853	MRPS12	95	50.746	Procavia_capensis
ENSCSAVG00000008777	-	70	49.630	ENSPCOG00000020370	MRPS12	94	49.630	Propithecus_coquereli
ENSCSAVG00000008777	-	70	47.761	ENSPVAG00000011605	MRPS12	94	47.761	Pteropus_vampyrus
ENSCSAVG00000008777	-	52	60.606	ENSPNYG00000015506	si:dkey-17e16.10	66	60.606	Pundamilia_nyererei
ENSCSAVG00000008777	-	52	60.204	ENSRNOG00000019949	Mrps12	71	60.204	Rattus_norvegicus
ENSCSAVG00000008777	-	70	50.000	ENSRBIG00000029741	MRPS12	94	50.000	Rhinopithecus_bieti
ENSCSAVG00000008777	-	73	49.286	ENSRROG00000030787	MRPS12	98	49.286	Rhinopithecus_roxellana
ENSCSAVG00000008777	-	70	49.254	ENSSBOG00000025707	MRPS12	94	49.254	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008777	-	52	59.596	ENSSDUG00000020424	si:dkey-17e16.10	68	59.596	Seriola_dumerili
ENSCSAVG00000008777	-	52	59.596	ENSSLDG00000016320	si:dkey-17e16.10	68	59.596	Seriola_lalandi_dorsalis
ENSCSAVG00000008777	-	73	50.714	ENSSARG00000006985	MRPS12	98	50.714	Sorex_araneus
ENSCSAVG00000008777	-	52	58.586	ENSSPUG00000004675	MRPS12	65	58.586	Sphenodon_punctatus
ENSCSAVG00000008777	-	52	62.626	ENSSPAG00000012951	si:dkey-17e16.10	69	62.626	Stegastes_partitus
ENSCSAVG00000008777	-	72	47.826	ENSSSCG00000031860	MRPS12	98	49.219	Sus_scrofa
ENSCSAVG00000008777	-	51	57.732	ENSTGUG00000016491	MRPS12	88	57.732	Taeniopygia_guttata
ENSCSAVG00000008777	-	52	62.626	ENSTRUG00000017342	si:dkey-17e16.10	70	62.626	Takifugu_rubripes
ENSCSAVG00000008777	-	52	60.606	ENSTNIG00000004898	si:dkey-17e16.10	72	60.606	Tetraodon_nigroviridis
ENSCSAVG00000008777	-	70	50.000	ENSTBEG00000001288	MRPS12	94	50.000	Tupaia_belangeri
ENSCSAVG00000008777	-	70	48.507	ENSTTRG00000011794	MRPS12	94	48.507	Tursiops_truncatus
ENSCSAVG00000008777	-	84	44.375	ENSXETG00000005326	mrps12	99	44.375	Xenopus_tropicalis
ENSCSAVG00000008777	-	52	61.616	ENSXCOG00000020766	si:dkey-17e16.10	67	61.616	Xiphophorus_couchianus
ENSCSAVG00000008777	-	52	61.616	ENSXMAG00000027119	si:dkey-17e16.10	70	61.616	Xiphophorus_maculatus