EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008782 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8421 bases
Position: chrreftig_156:326718-335138
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000014998	G-patch	PF01585.23	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015172	-	1351	-	ENSCSAVP00000014998	397 (aa)	-	H2ZBN3

Gene Model

Click here to download ENSCSAVG00000008782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008782	-	100	46.618	ENSG00000134453	RBM17	100	46.301	Homo_sapiens
ENSCSAVG00000008782	-	99	45.833	ENSAPOG00000007101	rbm17	99	46.959	Acanthochromis_polyacanthus
ENSCSAVG00000008782	-	100	45.894	ENSAMEG00000002107	RBM17	100	47.470	Ailuropoda_melanoleuca
ENSCSAVG00000008782	-	100	42.105	ENSACIG00000006251	rbm17	100	44.819	Amphilophus_citrinellus
ENSCSAVG00000008782	-	100	45.388	ENSAOCG00000014892	rbm17	100	46.506	Amphiprion_ocellaris
ENSCSAVG00000008782	-	100	45.388	ENSAPEG00000022779	rbm17	100	46.506	Amphiprion_percula
ENSCSAVG00000008782	-	100	44.941	ENSATEG00000004406	rbm17	100	45.794	Anabas_testudineus
ENSCSAVG00000008782	-	100	45.060	ENSAPLG00000004190	RBM17	100	46.635	Anas_platyrhynchos
ENSCSAVG00000008782	-	87	43.562	ENSACAG00000005418	RBM17	97	45.902	Anolis_carolinensis
ENSCSAVG00000008782	-	100	40.241	ENSANAG00000019330	-	86	60.377	Aotus_nancymaae
ENSCSAVG00000008782	-	100	45.652	ENSANAG00000030127	RBM17	85	65.094	Aotus_nancymaae
ENSCSAVG00000008782	-	100	42.227	ENSACLG00000003928	rbm17	100	43.023	Astatotilapia_calliptera
ENSCSAVG00000008782	-	100	44.118	ENSAMXG00000005853	rbm17	100	45.131	Astyanax_mexicanus
ENSCSAVG00000008782	-	100	44.928	ENSBTAG00000011094	-	100	46.506	Bos_taurus
ENSCSAVG00000008782	-	100	45.411	ENSBTAG00000021951	RBM17	100	46.988	Bos_taurus
ENSCSAVG00000008782	-	100	45.652	ENSCJAG00000020573	RBM17	100	47.229	Callithrix_jacchus
ENSCSAVG00000008782	-	100	45.894	ENSCAFG00000005206	RBM17	100	47.470	Canis_familiaris
ENSCSAVG00000008782	-	100	43.662	ENSCAFG00020005420	RBM17	100	46.814	Canis_lupus_dingo
ENSCSAVG00000008782	-	100	45.411	ENSCHIG00000023204	-	100	46.988	Capra_hircus
ENSCSAVG00000008782	-	100	45.783	ENSCHIG00000019921	-	100	45.783	Capra_hircus
ENSCSAVG00000008782	-	100	45.652	ENSTSYG00000001165	RBM17	89	65.094	Carlito_syrichta
ENSCSAVG00000008782	-	95	37.221	ENSCAPG00000006275	RBM17	97	41.576	Cavia_aperea
ENSCSAVG00000008782	-	100	44.048	ENSCPOG00000005679	RBM17	100	45.631	Cavia_porcellus
ENSCSAVG00000008782	-	100	45.652	ENSCCAG00000018655	RBM17	85	65.094	Cebus_capucinus
ENSCSAVG00000008782	-	100	46.618	ENSCATG00000041566	RBM17	85	65.094	Cercocebus_atys
ENSCSAVG00000008782	-	100	45.894	ENSCLAG00000012195	RBM17	99	47.470	Chinchilla_lanigera
ENSCSAVG00000008782	-	100	46.618	ENSCSAG00000013564	RBM17	100	46.301	Chlorocebus_sabaeus
ENSCSAVG00000008782	-	92	36.387	ENSCHOG00000005131	RBM17	100	38.120	Choloepus_hoffmanni
ENSCSAVG00000008782	-	99	45.232	ENSCPBG00000019836	RBM17	99	46.731	Chrysemys_picta_bellii
ENSCSAVG00000008782	-	98	42.132	ENSCANG00000023715	-	100	43.797	Colobus_angolensis_palliatus
ENSCSAVG00000008782	-	100	46.618	ENSCANG00000030987	RBM17	85	65.094	Colobus_angolensis_palliatus
ENSCSAVG00000008782	-	100	41.687	ENSCGRG00001009256	-	100	39.604	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008782	-	100	45.894	ENSCGRG00001013842	Rbm17	100	47.470	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008782	-	100	45.894	ENSCGRG00000006907	Rbm17	100	47.470	Cricetulus_griseus_crigri
ENSCSAVG00000008782	-	100	41.315	ENSCSEG00000018164	rbm17	100	43.925	Cynoglossus_semilaevis
ENSCSAVG00000008782	-	100	40.603	ENSCVAG00000002476	rbm17	100	43.387	Cyprinodon_variegatus
ENSCSAVG00000008782	-	100	45.390	ENSDARG00000031346	rbm17	100	45.390	Danio_rerio
ENSCSAVG00000008782	-	100	45.652	ENSDNOG00000035920	RBM17	100	47.229	Dasypus_novemcinctus
ENSCSAVG00000008782	-	99	36.404	FBgn0086683	Spf45	99	35.955	Drosophila_melanogaster
ENSCSAVG00000008782	-	100	38.813	ENSETEG00000006642	RBM17	83	49.791	Echinops_telfairi
ENSCSAVG00000008782	-	59	56.098	ENSEBUG00000010253	rbm17	75	56.098	Eptatretus_burgeri
ENSCSAVG00000008782	-	92	43.814	ENSEASG00005009236	-	99	43.928	Equus_asinus_asinus
ENSCSAVG00000008782	-	100	44.048	ENSEASG00005019205	-	100	45.215	Equus_asinus_asinus
ENSCSAVG00000008782	-	100	38.313	ENSECAG00000008939	RBM17	100	38.795	Equus_caballus
ENSCSAVG00000008782	-	100	40.095	ENSECAG00000001379	-	100	40.095	Equus_caballus
ENSCSAVG00000008782	-	85	37.255	ENSEEUG00000013077	RBM17	100	37.989	Erinaceus_europaeus
ENSCSAVG00000008782	-	99	43.218	ENSELUG00000006440	rbm17	99	42.889	Esox_lucius
ENSCSAVG00000008782	-	100	45.894	ENSFCAG00000031988	RBM17	100	47.470	Felis_catus
ENSCSAVG00000008782	-	100	45.388	ENSFALG00000001790	RBM17	100	46.973	Ficedula_albicollis
ENSCSAVG00000008782	-	100	45.894	ENSFDAG00000007470	RBM17	100	47.470	Fukomys_damarensis
ENSCSAVG00000008782	-	100	44.419	ENSFHEG00000001266	rbm17	100	45.946	Fundulus_heteroclitus
ENSCSAVG00000008782	-	99	44.048	ENSGMOG00000008438	rbm17	100	44.048	Gadus_morhua
ENSCSAVG00000008782	-	100	45.301	ENSGALG00000006332	RBM17	100	46.875	Gallus_gallus
ENSCSAVG00000008782	-	100	45.631	ENSGAFG00000019879	rbm17	100	46.489	Gambusia_affinis
ENSCSAVG00000008782	-	99	46.829	ENSGACG00000019174	rbm17	99	45.803	Gasterosteus_aculeatus
ENSCSAVG00000008782	-	99	45.232	ENSGAGG00000019906	RBM17	99	46.731	Gopherus_agassizii
ENSCSAVG00000008782	-	100	45.255	ENSHBUG00000016624	rbm17	100	46.377	Haplochromis_burtoni
ENSCSAVG00000008782	-	100	45.894	ENSHGLG00000011580	RBM17	100	47.470	Heterocephalus_glaber_female
ENSCSAVG00000008782	-	100	45.894	ENSHGLG00100010460	RBM17	100	47.470	Heterocephalus_glaber_male
ENSCSAVG00000008782	-	100	41.191	ENSHGLG00100010556	-	100	40.199	Heterocephalus_glaber_male
ENSCSAVG00000008782	-	99	44.762	ENSHCOG00000010865	rbm17	100	46.572	Hippocampus_comes
ENSCSAVG00000008782	-	99	44.208	ENSIPUG00000007699	Rbm17	99	45.863	Ictalurus_punctatus
ENSCSAVG00000008782	-	100	45.894	ENSSTOG00000013591	RBM17	100	47.470	Ictidomys_tridecemlineatus
ENSCSAVG00000008782	-	100	45.894	ENSJJAG00000022886	Rbm17	100	47.470	Jaculus_jaculus
ENSCSAVG00000008782	-	100	35.507	ENSJJAG00000000993	-	100	34.541	Jaculus_jaculus
ENSCSAVG00000008782	-	100	43.326	ENSKMAG00000021400	rbm17	100	45.667	Kryptolebias_marmoratus
ENSCSAVG00000008782	-	100	46.247	ENSLBEG00000000881	rbm17	100	44.794	Labrus_bergylta
ENSCSAVG00000008782	-	99	37.931	ENSLACG00000017297	RBM17	99	39.770	Latimeria_chalumnae
ENSCSAVG00000008782	-	100	45.542	ENSLOCG00000015659	rbm17	100	45.631	Lepisosteus_oculatus
ENSCSAVG00000008782	-	100	45.542	ENSLAFG00000011629	RBM17	100	47.115	Loxodonta_africana
ENSCSAVG00000008782	-	100	46.618	ENSMFAG00000035521	RBM17	85	65.094	Macaca_fascicularis
ENSCSAVG00000008782	-	100	46.618	ENSMMUG00000015152	RBM17	85	65.094	Macaca_mulatta
ENSCSAVG00000008782	-	100	46.618	ENSMNEG00000017264	RBM17	85	65.094	Macaca_nemestrina
ENSCSAVG00000008782	-	100	46.618	ENSMLEG00000029340	RBM17	85	65.094	Mandrillus_leucophaeus
ENSCSAVG00000008782	-	100	44.471	ENSMAMG00000000387	rbm17	100	45.070	Mastacembelus_armatus
ENSCSAVG00000008782	-	100	44.787	ENSMZEG00005015179	rbm17	100	45.882	Maylandia_zebra
ENSCSAVG00000008782	-	100	45.084	ENSMGAG00000003981	RBM17	100	46.651	Meleagris_gallopavo
ENSCSAVG00000008782	-	100	45.894	ENSMAUG00000019247	Rbm17	100	47.470	Mesocricetus_auratus
ENSCSAVG00000008782	-	100	46.860	ENSMICG00000003976	-	100	47.343	Microcebus_murinus
ENSCSAVG00000008782	-	100	42.823	ENSMICG00000041489	-	100	44.258	Microcebus_murinus
ENSCSAVG00000008782	-	92	38.482	ENSMOCG00000014517	-	99	36.911	Microtus_ochrogaster
ENSCSAVG00000008782	-	100	45.894	ENSMOCG00000011847	Rbm17	100	47.470	Microtus_ochrogaster
ENSCSAVG00000008782	-	100	42.686	ENSMMOG00000010264	rbm17	100	41.745	Mola_mola
ENSCSAVG00000008782	-	100	45.107	ENSMODG00000016648	RBM17	100	46.667	Monodelphis_domestica
ENSCSAVG00000008782	-	100	44.836	ENSMALG00000010597	rbm17	100	43.678	Monopterus_albus
ENSCSAVG00000008782	-	100	45.411	MGP_CAROLIEiJ_G0023173	Rbm17	100	46.988	Mus_caroli
ENSCSAVG00000008782	-	100	45.411	ENSMUSG00000037197	Rbm17	100	46.988	Mus_musculus
ENSCSAVG00000008782	-	100	45.411	MGP_PahariEiJ_G0019233	Rbm17	100	46.988	Mus_pahari
ENSCSAVG00000008782	-	100	45.411	MGP_SPRETEiJ_G0024091	Rbm17	100	46.988	Mus_spretus
ENSCSAVG00000008782	-	86	43.333	ENSMPUG00000016359	RBM17	97	45.152	Mustela_putorius_furo
ENSCSAVG00000008782	-	100	47.433	ENSMLUG00000025709	-	100	47.433	Myotis_lucifugus
ENSCSAVG00000008782	-	100	45.542	ENSMLUG00000002302	-	100	47.115	Myotis_lucifugus
ENSCSAVG00000008782	-	100	45.894	ENSNGAG00000000741	Rbm17	100	47.470	Nannospalax_galili
ENSCSAVG00000008782	-	100	37.037	ENSNGAG00000000663	-	100	35.930	Nannospalax_galili
ENSCSAVG00000008782	-	100	43.675	ENSNBRG00000018148	rbm17	100	44.153	Neolamprologus_brichardi
ENSCSAVG00000008782	-	100	46.618	ENSNLEG00000033350	RBM17	85	65.094	Nomascus_leucogenys
ENSCSAVG00000008782	-	100	41.050	ENSMEUG00000011347	RBM17	100	42.619	Notamacropus_eugenii
ENSCSAVG00000008782	-	100	38.647	ENSOPRG00000002993	RBM17	100	38.647	Ochotona_princeps
ENSCSAVG00000008782	-	97	37.306	ENSODEG00000007286	-	99	37.306	Octodon_degus
ENSCSAVG00000008782	-	100	46.506	ENSODEG00000004393	RBM17	100	48.077	Octodon_degus
ENSCSAVG00000008782	-	100	44.686	ENSONIG00000011838	rbm17	100	45.803	Oreochromis_niloticus
ENSCSAVG00000008782	-	100	45.411	ENSOANG00000015455	RBM17	100	47.017	Ornithorhynchus_anatinus
ENSCSAVG00000008782	-	100	45.626	ENSORLG00000028798	rbm17	100	46.934	Oryzias_latipes
ENSCSAVG00000008782	-	100	45.390	ENSORLG00020004593	rbm17	100	44.952	Oryzias_latipes_hni
ENSCSAVG00000008782	-	100	46.341	ENSORLG00015000033	rbm17	100	47.689	Oryzias_latipes_hsok
ENSCSAVG00000008782	-	100	45.755	ENSOMEG00000012060	rbm17	100	59.146	Oryzias_melastigma
ENSCSAVG00000008782	-	100	47.101	ENSOGAG00000015687	RBM17	100	47.585	Otolemur_garnettii
ENSCSAVG00000008782	-	100	45.411	ENSOARG00000012975	RBM17	100	46.988	Ovis_aries
ENSCSAVG00000008782	-	100	46.618	ENSPPAG00000032347	RBM17	85	65.094	Pan_paniscus
ENSCSAVG00000008782	-	100	45.894	ENSPPRG00000010706	RBM17	100	47.470	Panthera_pardus
ENSCSAVG00000008782	-	100	45.894	ENSPTIG00000007596	RBM17	100	47.470	Panthera_tigris_altaica
ENSCSAVG00000008782	-	100	46.618	ENSPTRG00000002265	RBM17	85	65.094	Pan_troglodytes
ENSCSAVG00000008782	-	100	46.618	ENSPANG00000023425	RBM17	85	65.094	Papio_anubis
ENSCSAVG00000008782	-	100	43.852	ENSPKIG00000025526	rbm17	100	43.750	Paramormyrops_kingsleyae
ENSCSAVG00000008782	-	100	42.237	ENSPKIG00000005048	-	100	43.418	Paramormyrops_kingsleyae
ENSCSAVG00000008782	-	99	45.146	ENSPSIG00000012332	RBM17	99	46.973	Pelodiscus_sinensis
ENSCSAVG00000008782	-	100	44.039	ENSPMGG00000007980	rbm17	100	42.686	Periophthalmus_magnuspinnatus
ENSCSAVG00000008782	-	100	45.894	ENSPEMG00000014320	Rbm17	100	47.470	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008782	-	100	45.476	ENSPCIG00000019260	-	100	47.031	Phascolarctos_cinereus
ENSCSAVG00000008782	-	100	42.290	ENSPFOG00000013271	rbm17	100	44.626	Poecilia_formosa
ENSCSAVG00000008782	-	100	42.056	ENSPLAG00000004455	rbm17	100	44.630	Poecilia_latipinna
ENSCSAVG00000008782	-	100	43.855	ENSPMEG00000014864	rbm17	100	46.265	Poecilia_mexicana
ENSCSAVG00000008782	-	100	42.723	ENSPREG00000015589	rbm17	100	45.070	Poecilia_reticulata
ENSCSAVG00000008782	-	99	37.831	ENSPPYG00000019881	-	100	38.592	Pongo_abelii
ENSCSAVG00000008782	-	100	46.618	ENSPPYG00000002067	RBM17	100	46.301	Pongo_abelii
ENSCSAVG00000008782	-	80	34.593	ENSPPYG00000019042	-	100	33.333	Pongo_abelii
ENSCSAVG00000008782	-	100	39.614	ENSPCAG00000016879	RBM17	100	41.205	Procavia_capensis
ENSCSAVG00000008782	-	100	46.618	ENSPCOG00000027881	RBM17	100	47.101	Propithecus_coquereli
ENSCSAVG00000008782	-	100	40.821	ENSPVAG00000015499	RBM17	100	40.821	Pteropus_vampyrus
ENSCSAVG00000008782	-	100	44.417	ENSPNYG00000015274	rbm17	100	44.554	Pundamilia_nyererei
ENSCSAVG00000008782	-	100	42.317	ENSPNAG00000030046	rbm17	100	44.681	Pygocentrus_nattereri
ENSCSAVG00000008782	-	100	45.894	ENSRNOG00000018767	Rbm17	100	47.470	Rattus_norvegicus
ENSCSAVG00000008782	-	100	46.618	ENSRBIG00000043727	RBM17	85	65.094	Rhinopithecus_bieti
ENSCSAVG00000008782	-	100	46.618	ENSRROG00000044142	RBM17	85	65.094	Rhinopithecus_roxellana
ENSCSAVG00000008782	-	100	45.652	ENSSBOG00000031661	-	94	60.684	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008782	-	100	44.743	ENSSBOG00000023653	-	100	44.254	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008782	-	100	45.107	ENSSHAG00000012480	-	100	46.667	Sarcophilus_harrisii
ENSCSAVG00000008782	-	100	46.394	ENSSFOG00015009892	rbm17	100	46.651	Scleropages_formosus
ENSCSAVG00000008782	-	100	43.198	ENSSMAG00000012368	rbm17	100	43.675	Scophthalmus_maximus
ENSCSAVG00000008782	-	100	45.199	ENSSDUG00000015015	rbm17	100	46.081	Seriola_dumerili
ENSCSAVG00000008782	-	100	45.199	ENSSLDG00000014486	rbm17	100	46.081	Seriola_lalandi_dorsalis
ENSCSAVG00000008782	-	60	37.959	ENSSARG00000001792	-	100	40.000	Sorex_araneus
ENSCSAVG00000008782	-	99	45.721	ENSSPUG00000001036	RBM17	99	47.458	Sphenodon_punctatus
ENSCSAVG00000008782	-	100	45.388	ENSSPAG00000002338	rbm17	100	46.506	Stegastes_partitus
ENSCSAVG00000008782	-	100	45.652	ENSSSCG00000011134	RBM17	100	47.229	Sus_scrofa
ENSCSAVG00000008782	-	100	45.388	ENSTGUG00000002013	RBM17	100	46.973	Taeniopygia_guttata
ENSCSAVG00000008782	-	100	46.247	ENSTRUG00000010698	rbm17	100	46.247	Takifugu_rubripes
ENSCSAVG00000008782	-	100	46.489	ENSTNIG00000006892	rbm17	100	46.489	Tetraodon_nigroviridis
ENSCSAVG00000008782	-	100	31.151	ENSTBEG00000014686	RBM17	100	34.300	Tupaia_belangeri
ENSCSAVG00000008782	-	87	45.179	ENSTTRG00000001344	RBM17	98	46.832	Tursiops_truncatus
ENSCSAVG00000008782	-	100	43.256	ENSUAMG00000009499	RBM17	100	46.210	Ursus_americanus
ENSCSAVG00000008782	-	100	46.860	ENSUMAG00000012237	RBM17	100	47.343	Ursus_maritimus
ENSCSAVG00000008782	-	100	40.821	ENSVPAG00000005497	RBM17	100	40.821	Vicugna_pacos
ENSCSAVG00000008782	-	100	43.662	ENSVVUG00000006780	RBM17	100	46.814	Vulpes_vulpes
ENSCSAVG00000008782	-	99	46.845	ENSXETG00000018123	rbm17	100	46.845	Xenopus_tropicalis
ENSCSAVG00000008782	-	100	44.310	ENSXMAG00000008674	rbm17	100	46.715	Xiphophorus_maculatus