EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008807 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 31172 bases
Position: chrreftig_26:1416244-1447415
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015026	TUDOR	PF00567.24	1.9e-26	1	1
ENSCSAVP00000015026	SNase	PF00565.17	2.3e-62	1	4
ENSCSAVP00000015026	SNase	PF00565.17	2.3e-62	2	4
ENSCSAVP00000015026	SNase	PF00565.17	2.3e-62	3	4
ENSCSAVP00000015026	SNase	PF00565.17	2.3e-62	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015200	-	2910	-	ENSCSAVP00000015026	911 (aa)	-	H2ZBR1

Gene Model

Click here to download ENSCSAVG00000008807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008807	-	99	58.232	ENSG00000197157	SND1	99	58.086	Homo_sapiens
ENSCSAVG00000008807	-	99	57.440	ENSAPOG00000017599	snd1	99	57.642	Acanthochromis_polyacanthus
ENSCSAVG00000008807	-	99	57.734	ENSAMEG00000004664	SND1	94	57.734	Ailuropoda_melanoleuca
ENSCSAVG00000008807	-	98	55.754	ENSACIG00000003551	snd1	99	55.203	Amphilophus_citrinellus
ENSCSAVG00000008807	-	99	57.221	ENSAOCG00000014166	snd1	99	57.424	Amphiprion_ocellaris
ENSCSAVG00000008807	-	99	57.112	ENSAPEG00000007067	snd1	99	57.314	Amphiprion_percula
ENSCSAVG00000008807	-	98	56.396	ENSATEG00000018475	snd1	89	56.396	Anabas_testudineus
ENSCSAVG00000008807	-	99	58.122	ENSANAG00000034463	SND1	99	57.978	Aotus_nancymaae
ENSCSAVG00000008807	-	99	57.393	ENSACLG00000022897	snd1	99	57.393	Astatotilapia_calliptera
ENSCSAVG00000008807	-	99	57.190	ENSAMXG00000016318	snd1	99	57.190	Astyanax_mexicanus
ENSCSAVG00000008807	-	99	58.011	ENSBTAG00000010692	SND1	99	57.866	Bos_taurus
ENSCSAVG00000008807	-	98	44.660	WBGene00006626	tsn-1	99	44.660	Caenorhabditis_elegans
ENSCSAVG00000008807	-	99	58.122	ENSCJAG00000017668	SND1	99	57.978	Callithrix_jacchus
ENSCSAVG00000008807	-	99	57.486	ENSCAFG00000001700	SND1	99	57.923	Canis_familiaris
ENSCSAVG00000008807	-	99	57.486	ENSCAFG00020021639	SND1	99	57.923	Canis_lupus_dingo
ENSCSAVG00000008807	-	99	58.011	ENSCHIG00000023390	SND1	99	57.866	Capra_hircus
ENSCSAVG00000008807	-	71	63.002	ENSTSYG00000004979	SND1	96	63.002	Carlito_syrichta
ENSCSAVG00000008807	-	97	52.626	ENSCAPG00000010677	SND1	97	52.626	Cavia_aperea
ENSCSAVG00000008807	-	99	58.232	ENSCPOG00000006251	SND1	99	58.086	Cavia_porcellus
ENSCSAVG00000008807	-	99	58.122	ENSCCAG00000036847	SND1	99	57.976	Cebus_capucinus
ENSCSAVG00000008807	-	99	58.453	ENSCATG00000035214	SND1	99	58.315	Cercocebus_atys
ENSCSAVG00000008807	-	99	57.901	ENSCLAG00000011796	SND1	96	62.669	Chinchilla_lanigera
ENSCSAVG00000008807	-	99	58.453	ENSCSAG00000010182	SND1	99	58.306	Chlorocebus_sabaeus
ENSCSAVG00000008807	-	77	46.602	ENSCHOG00000002218	SND1	86	46.602	Choloepus_hoffmanni
ENSCSAVG00000008807	-	99	56.831	ENSCPBG00000018094	SND1	100	57.268	Chrysemys_picta_bellii
ENSCSAVG00000008807	-	98	84.956	ENSCING00000000524	-	99	84.113	Ciona_intestinalis
ENSCSAVG00000008807	-	99	58.453	ENSCANG00000035119	SND1	99	58.306	Colobus_angolensis_palliatus
ENSCSAVG00000008807	-	99	57.854	ENSCGRG00001022514	Snd1	97	62.606	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008807	-	97	57.705	ENSCGRG00000012277	Snd1	99	57.705	Cricetulus_griseus_crigri
ENSCSAVG00000008807	-	99	56.236	ENSCSEG00000008661	snd1	99	56.591	Cynoglossus_semilaevis
ENSCSAVG00000008807	-	99	56.332	ENSCVAG00000010316	snd1	100	56.050	Cyprinodon_variegatus
ENSCSAVG00000008807	-	99	57.549	ENSDARG00000006766	snd1	97	61.728	Danio_rerio
ENSCSAVG00000008807	-	97	56.439	ENSDNOG00000006795	SND1	100	56.439	Dasypus_novemcinctus
ENSCSAVG00000008807	-	99	58.453	ENSDORG00000000336	Snd1	99	58.306	Dipodomys_ordii
ENSCSAVG00000008807	-	98	46.861	FBgn0035121	Tudor-SN	99	46.932	Drosophila_melanogaster
ENSCSAVG00000008807	-	89	55.556	ENSETEG00000000375	SND1	92	55.556	Echinops_telfairi
ENSCSAVG00000008807	-	63	57.796	ENSEBUG00000014201	-	85	64.362	Eptatretus_burgeri
ENSCSAVG00000008807	-	99	57.065	ENSEASG00005008513	SND1	99	56.926	Equus_asinus_asinus
ENSCSAVG00000008807	-	99	58.296	ENSECAG00000011451	SND1	99	58.150	Equus_caballus
ENSCSAVG00000008807	-	99	51.217	ENSEEUG00000014737	SND1	99	51.542	Erinaceus_europaeus
ENSCSAVG00000008807	-	99	56.893	ENSELUG00000001805	snd1	96	57.096	Esox_lucius
ENSCSAVG00000008807	-	99	58.015	ENSFCAG00000008289	SND1	99	58.015	Felis_catus
ENSCSAVG00000008807	-	98	57.807	ENSFDAG00000015881	SND1	99	57.802	Fukomys_damarensis
ENSCSAVG00000008807	-	99	55.080	ENSFHEG00000004093	snd1	99	56.591	Fundulus_heteroclitus
ENSCSAVG00000008807	-	63	47.324	ENSGMOG00000018932	snd1	65	47.324	Gadus_morhua
ENSCSAVG00000008807	-	99	56.565	ENSGAFG00000008421	snd1	99	57.223	Gambusia_affinis
ENSCSAVG00000008807	-	99	36.638	ENSGACG00000019793	snd1	99	37.005	Gasterosteus_aculeatus
ENSCSAVG00000008807	-	99	58.453	ENSGGOG00000009614	SND1	99	58.315	Gorilla_gorilla
ENSCSAVG00000008807	-	99	57.314	ENSHBUG00000019135	snd1	99	57.314	Haplochromis_burtoni
ENSCSAVG00000008807	-	99	58.232	ENSHGLG00000003618	SND1	96	62.669	Heterocephalus_glaber_female
ENSCSAVG00000008807	-	99	58.086	ENSHGLG00100012449	SND1	99	58.086	Heterocephalus_glaber_male
ENSCSAVG00000008807	-	99	56.769	ENSHCOG00000005266	snd1	99	56.769	Hippocampus_comes
ENSCSAVG00000008807	-	99	56.831	ENSIPUG00000013279	snd1	99	56.831	Ictalurus_punctatus
ENSCSAVG00000008807	-	99	58.453	ENSSTOG00000002140	SND1	99	58.306	Ictidomys_tridecemlineatus
ENSCSAVG00000008807	-	99	58.122	ENSJJAG00000009561	Snd1	99	57.976	Jaculus_jaculus
ENSCSAVG00000008807	-	99	57.112	ENSKMAG00000016997	snd1	99	57.314	Kryptolebias_marmoratus
ENSCSAVG00000008807	-	99	56.783	ENSLBEG00000013563	snd1	99	56.987	Labrus_bergylta
ENSCSAVG00000008807	-	98	56.703	ENSLOCG00000015537	snd1	99	56.399	Lepisosteus_oculatus
ENSCSAVG00000008807	-	99	58.306	ENSLAFG00000009696	SND1	99	58.306	Loxodonta_africana
ENSCSAVG00000008807	-	99	58.453	ENSMFAG00000038114	SND1	99	58.315	Macaca_fascicularis
ENSCSAVG00000008807	-	99	58.453	ENSMMUG00000015432	SND1	96	62.818	Macaca_mulatta
ENSCSAVG00000008807	-	99	58.453	ENSMNEG00000039808	SND1	97	62.982	Macaca_nemestrina
ENSCSAVG00000008807	-	99	58.343	ENSMLEG00000029040	SND1	97	62.982	Mandrillus_leucophaeus
ENSCSAVG00000008807	-	99	56.489	ENSMAMG00000011739	snd1	99	56.489	Mastacembelus_armatus
ENSCSAVG00000008807	-	99	57.393	ENSMZEG00005005681	snd1	99	57.393	Maylandia_zebra
ENSCSAVG00000008807	-	99	58.453	ENSMICG00000000097	SND1	99	58.306	Microcebus_murinus
ENSCSAVG00000008807	-	99	58.232	ENSMOCG00000005040	Snd1	99	58.086	Microtus_ochrogaster
ENSCSAVG00000008807	-	99	57.002	ENSMMOG00000001795	snd1	99	57.205	Mola_mola
ENSCSAVG00000008807	-	99	58.075	ENSMODG00000015182	SND1	99	57.930	Monodelphis_domestica
ENSCSAVG00000008807	-	99	57.143	ENSMALG00000012071	snd1	99	57.143	Monopterus_albus
ENSCSAVG00000008807	-	98	58.093	MGP_CAROLIEiJ_G0028159	Snd1	98	62.712	Mus_caroli
ENSCSAVG00000008807	-	98	58.204	ENSMUSG00000001424	Snd1	98	62.775	Mus_musculus
ENSCSAVG00000008807	-	98	57.982	MGP_PahariEiJ_G0021917	Snd1	98	62.542	Mus_pahari
ENSCSAVG00000008807	-	98	58.093	MGP_SPRETEiJ_G0029159	Snd1	98	62.606	Mus_spretus
ENSCSAVG00000008807	-	99	57.877	ENSMPUG00000006545	SND1	99	57.877	Mustela_putorius_furo
ENSCSAVG00000008807	-	97	57.603	ENSMLUG00000017130	SND1	99	57.603	Myotis_lucifugus
ENSCSAVG00000008807	-	99	57.901	ENSNGAG00000011186	Snd1	99	57.756	Nannospalax_galili
ENSCSAVG00000008807	-	99	57.503	ENSNBRG00000006681	snd1	99	57.503	Neolamprologus_brichardi
ENSCSAVG00000008807	-	99	58.306	ENSNLEG00000012263	SND1	98	62.944	Nomascus_leucogenys
ENSCSAVG00000008807	-	91	55.556	ENSOPRG00000013405	SND1	91	55.556	Ochotona_princeps
ENSCSAVG00000008807	-	99	57.743	ENSODEG00000011502	SND1	99	57.393	Octodon_degus
ENSCSAVG00000008807	-	99	57.174	ENSONIG00000011481	snd1	97	57.174	Oreochromis_niloticus
ENSCSAVG00000008807	-	97	56.887	ENSOANG00000000817	SND1	99	56.407	Ornithorhynchus_anatinus
ENSCSAVG00000008807	-	99	58.040	ENSOCUG00000001620	SND1	99	58.040	Oryctolagus_cuniculus
ENSCSAVG00000008807	-	98	57.016	ENSORLG00000015201	snd1	99	56.441	Oryzias_latipes
ENSCSAVG00000008807	-	98	57.238	ENSORLG00020013991	snd1	99	56.659	Oryzias_latipes_hni
ENSCSAVG00000008807	-	98	57.127	ENSORLG00015012436	snd1	99	56.550	Oryzias_latipes_hsok
ENSCSAVG00000008807	-	99	57.314	ENSOMEG00000006406	snd1	99	57.314	Oryzias_melastigma
ENSCSAVG00000008807	-	99	58.434	ENSOGAG00000013356	SND1	93	58.288	Otolemur_garnettii
ENSCSAVG00000008807	-	97	56.117	ENSOARG00000002149	SND1	100	56.117	Ovis_aries
ENSCSAVG00000008807	-	99	58.343	ENSPPAG00000042947	SND1	99	58.196	Pan_paniscus
ENSCSAVG00000008807	-	99	58.015	ENSPPRG00000004494	SND1	99	58.015	Panthera_pardus
ENSCSAVG00000008807	-	99	57.906	ENSPTIG00000014214	SND1	99	57.906	Panthera_tigris_altaica
ENSCSAVG00000008807	-	99	58.343	ENSPTRG00000023911	SND1	99	58.202	Pan_troglodytes
ENSCSAVG00000008807	-	99	57.032	ENSPANG00000011997	SND1	99	58.315	Papio_anubis
ENSCSAVG00000008807	-	98	56.811	ENSPKIG00000023494	snd1	99	56.257	Paramormyrops_kingsleyae
ENSCSAVG00000008807	-	91	57.381	ENSPMGG00000003629	snd1	100	57.381	Periophthalmus_magnuspinnatus
ENSCSAVG00000008807	-	99	58.122	ENSPEMG00000010240	Snd1	99	57.976	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008807	-	97	55.456	ENSPMAG00000007915	-	99	55.456	Petromyzon_marinus
ENSCSAVG00000008807	-	99	58.232	ENSPCIG00000011561	SND1	99	58.086	Phascolarctos_cinereus
ENSCSAVG00000008807	-	99	56.455	ENSPFOG00000001557	snd1	99	56.674	Poecilia_formosa
ENSCSAVG00000008807	-	99	56.427	ENSPLAG00000018459	snd1	97	56.645	Poecilia_latipinna
ENSCSAVG00000008807	-	99	56.565	ENSPMEG00000006803	snd1	99	56.783	Poecilia_mexicana
ENSCSAVG00000008807	-	99	56.346	ENSPREG00000002189	snd1	99	56.550	Poecilia_reticulata
ENSCSAVG00000008807	-	87	60.175	ENSPPYG00000017972	SND1	99	60.000	Pongo_abelii
ENSCSAVG00000008807	-	99	50.221	ENSPCAG00000011305	SND1	99	50.330	Procavia_capensis
ENSCSAVG00000008807	-	99	58.453	ENSPCOG00000026791	SND1	100	58.249	Propithecus_coquereli
ENSCSAVG00000008807	-	99	56.796	ENSPVAG00000013945	SND1	99	56.656	Pteropus_vampyrus
ENSCSAVG00000008807	-	99	57.503	ENSPNYG00000000932	snd1	99	57.503	Pundamilia_nyererei
ENSCSAVG00000008807	-	99	57.814	ENSPNAG00000001206	snd1	99	57.814	Pygocentrus_nattereri
ENSCSAVG00000008807	-	98	57.761	ENSRNOG00000031173	Snd1	100	57.383	Rattus_norvegicus
ENSCSAVG00000008807	-	71	63.501	ENSRBIG00000027782	-	93	63.465	Rhinopithecus_bieti
ENSCSAVG00000008807	-	99	58.453	ENSRROG00000033020	SND1	99	58.306	Rhinopithecus_roxellana
ENSCSAVG00000008807	-	99	58.232	ENSSBOG00000032461	SND1	99	58.090	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008807	-	97	56.488	ENSSHAG00000015359	SND1	100	56.488	Sarcophilus_harrisii
ENSCSAVG00000008807	-	98	57.143	ENSSFOG00015001103	snd1	99	56.678	Scleropages_formosus
ENSCSAVG00000008807	-	98	57.572	ENSSMAG00000001932	snd1	94	57.065	Scophthalmus_maximus
ENSCSAVG00000008807	-	99	56.987	ENSSDUG00000002699	snd1	93	56.987	Seriola_dumerili
ENSCSAVG00000008807	-	99	51.743	ENSSLDG00000001950	snd1	99	51.743	Seriola_lalandi_dorsalis
ENSCSAVG00000008807	-	85	57.670	ENSSARG00000004877	SND1	92	57.670	Sorex_araneus
ENSCSAVG00000008807	-	71	57.340	ENSSPUG00000017586	SND1	96	57.241	Sphenodon_punctatus
ENSCSAVG00000008807	-	73	61.565	ENSSPAG00000021398	snd1	98	61.565	Stegastes_partitus
ENSCSAVG00000008807	-	99	58.122	ENSSSCG00000016590	SND1	99	57.976	Sus_scrofa
ENSCSAVG00000008807	-	99	56.455	ENSTRUG00000014067	snd1	99	56.455	Takifugu_rubripes
ENSCSAVG00000008807	-	99	56.346	ENSTNIG00000011019	snd1	98	61.642	Tetraodon_nigroviridis
ENSCSAVG00000008807	-	93	53.396	ENSTBEG00000003999	SND1	100	53.396	Tupaia_belangeri
ENSCSAVG00000008807	-	99	55.899	ENSTTRG00000006059	SND1	99	55.763	Tursiops_truncatus
ENSCSAVG00000008807	-	85	59.810	ENSUAMG00000005604	-	93	59.810	Ursus_americanus
ENSCSAVG00000008807	-	66	51.429	ENSUAMG00000002820	-	88	51.429	Ursus_americanus
ENSCSAVG00000008807	-	99	57.751	ENSUMAG00000005960	SND1	99	57.751	Ursus_maritimus
ENSCSAVG00000008807	-	73	57.692	ENSVPAG00000008302	SND1	74	57.692	Vicugna_pacos
ENSCSAVG00000008807	-	99	57.377	ENSVVUG00000007226	SND1	99	57.814	Vulpes_vulpes
ENSCSAVG00000008807	-	97	54.157	ENSXETG00000023043	snd1	100	55.224	Xenopus_tropicalis
ENSCSAVG00000008807	-	91	55.012	ENSXCOG00000013629	snd1	98	55.238	Xiphophorus_couchianus
ENSCSAVG00000008807	-	99	56.674	ENSXMAG00000011469	snd1	99	56.878	Xiphophorus_maculatus