EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008808 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2970 bases
Position: chrreftig_48:685235-688204
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015027	IF-2	PF11987.8	4e-20	1	1
ENSCSAVP00000015027	GTP_EFTU	PF00009.27	2.5e-30	1	1
ENSCSAVP00000015027	MMR_HSR1	PF01926.23	3.7e-07	1	1
ENSCSAVP00000015027	GTP_EFTU_D2	PF03144.25	8.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015201	-	2808	-	ENSCSAVP00000015027	935 (aa)	-	H2ZBR2

Gene Model

Click here to download ENSCSAVG00000008808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008808	-	66	62.662	ENSAPOG00000004375	eif5b	52	62.662	Acanthochromis_polyacanthus
ENSCSAVG00000008808	-	66	63.474	ENSACIG00000024324	eif5b	61	63.474	Amphilophus_citrinellus
ENSCSAVG00000008808	-	64	64.833	ENSATEG00000011451	-	61	64.833	Anabas_testudineus
ENSCSAVG00000008808	-	66	63.799	ENSATEG00000011259	eif5b	62	63.799	Anabas_testudineus
ENSCSAVG00000008808	-	66	63.799	ENSATEG00000006765	eif5b	50	63.799	Anabas_testudineus
ENSCSAVG00000008808	-	95	54.366	ENSACAG00000008305	-	52	66.505	Anolis_carolinensis
ENSCSAVG00000008808	-	66	64.610	ENSAMXG00000018383	eif5b	51	64.286	Astyanax_mexicanus
ENSCSAVG00000008808	-	67	55.821	WBGene00021857	iffb-1	57	56.149	Caenorhabditis_elegans
ENSCSAVG00000008808	-	69	62.766	ENSCPOG00000011967	-	50	65.210	Cavia_porcellus
ENSCSAVG00000008808	-	66	63.636	ENSCSEG00000014153	eif5b	51	63.636	Cynoglossus_semilaevis
ENSCSAVG00000008808	-	84	62.987	ENSCVAG00000019619	eif5b	51	62.987	Cyprinodon_variegatus
ENSCSAVG00000008808	-	66	62.276	FBgn0026259	eIF5B	54	62.276	Drosophila_melanogaster
ENSCSAVG00000008808	-	65	63.132	ENSELUG00000001132	eif5b	57	63.132	Esox_lucius
ENSCSAVG00000008808	-	66	62.013	ENSGMOG00000002031	eif5b	53	62.013	Gadus_morhua
ENSCSAVG00000008808	-	66	64.123	ENSGACG00000010536	eif5b	84	64.123	Gasterosteus_aculeatus
ENSCSAVG00000008808	-	66	65.747	ENSGAGG00000022242	-	91	65.747	Gopherus_agassizii
ENSCSAVG00000008808	-	66	63.961	ENSHBUG00000023319	eif5b	51	63.961	Haplochromis_burtoni
ENSCSAVG00000008808	-	66	63.312	ENSHCOG00000002807	eif5b	51	63.312	Hippocampus_comes
ENSCSAVG00000008808	-	66	63.961	ENSIPUG00000020910	eif5b	53	63.961	Ictalurus_punctatus
ENSCSAVG00000008808	-	66	64.286	ENSKMAG00000004325	eif5b	51	64.286	Kryptolebias_marmoratus
ENSCSAVG00000008808	-	66	62.682	ENSLBEG00000027090	eif5b	59	62.682	Labrus_bergylta
ENSCSAVG00000008808	-	66	64.251	ENSLACG00000011688	eif5b	51	64.251	Latimeria_chalumnae
ENSCSAVG00000008808	-	66	63.312	ENSMAMG00000022568	eif5b	51	63.312	Mastacembelus_armatus
ENSCSAVG00000008808	-	66	63.961	ENSMZEG00005012696	eif5b	51	63.961	Maylandia_zebra
ENSCSAVG00000008808	-	81	55.665	ENSMODG00000001387	-	52	64.887	Monodelphis_domestica
ENSCSAVG00000008808	-	66	64.610	ENSMALG00000005862	eif5b	51	64.610	Monopterus_albus
ENSCSAVG00000008808	-	66	62.825	ENSNBRG00000021912	eif5b	57	62.825	Neolamprologus_brichardi
ENSCSAVG00000008808	-	66	65.696	ENSOCUG00000021154	-	51	65.696	Oryctolagus_cuniculus
ENSCSAVG00000008808	-	81	53.079	ENSPMAG00000004508	eif5b	51	61.564	Petromyzon_marinus
ENSCSAVG00000008808	-	65	63.980	ENSPFOG00000007543	eif5b	89	62.745	Poecilia_formosa
ENSCSAVG00000008808	-	66	62.987	ENSPLAG00000015913	eif5b	52	62.987	Poecilia_latipinna
ENSCSAVG00000008808	-	66	63.149	ENSPMEG00000006712	eif5b	52	63.149	Poecilia_mexicana
ENSCSAVG00000008808	-	68	60.250	ENSPCAG00000007829	-	51	61.003	Procavia_capensis
ENSCSAVG00000008808	-	66	61.538	ENSPCOG00000019508	-	100	65.495	Propithecus_coquereli
ENSCSAVG00000008808	-	64	53.333	ENSPVAG00000006592	-	50	53.333	Pteropus_vampyrus
ENSCSAVG00000008808	-	66	62.945	ENSPNYG00000021051	eif5b	57	62.945	Pundamilia_nyererei
ENSCSAVG00000008808	-	66	64.286	ENSPNAG00000023852	eif5b	50	64.286	Pygocentrus_nattereri
ENSCSAVG00000008808	-	81	43.909	YAL035W	FUN12	60	49.917	Saccharomyces_cerevisiae
ENSCSAVG00000008808	-	66	64.448	ENSSFOG00015000594	eif5b	50	64.448	Scleropages_formosus
ENSCSAVG00000008808	-	66	60.390	ENSSPAG00000005335	eif5b	60	60.390	Stegastes_partitus
ENSCSAVG00000008808	-	88	54.677	ENSXETG00000019377	eif5b	52	65.696	Xenopus_tropicalis
ENSCSAVG00000008808	-	88	51.954	ENSXCOG00000016681	eif5b	69	62.621	Xiphophorus_couchianus
ENSCSAVG00000008808	-	88	51.669	ENSXMAG00000001002	eif5b	69	62.237	Xiphophorus_maculatus