EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008867 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 7436 bases
Position: chrreftig_76:2428836-2436271
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015131	PARP	PF00644.20	2.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015305	-	1128	-	ENSCSAVP00000015131	375 (aa)	-	H2ZC15

Gene Model

Click here to download ENSCSAVG00000008867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008867	-	99	33.422	ENSCSAVG00000000429	-	82	33.422
ENSCSAVG00000008867	-	99	36.000	ENSCSAVG00000007134	-	99	36.000
ENSCSAVG00000008867	-	99	37.722	ENSCSAVG00000007096	-	99	37.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008867	-	54	37.019	ENSCING00000002959	-	59	37.019	Ciona_intestinalis
ENSCSAVG00000008867	-	99	30.848	ENSCING00000013562	-	95	30.848	Ciona_intestinalis
ENSCSAVG00000008867	-	59	33.617	ENSCING00000015928	-	94	33.617	Ciona_intestinalis
ENSCSAVG00000008867	-	99	36.224	ENSCING00000014082	-	73	36.224	Ciona_intestinalis
ENSCSAVG00000008867	-	99	30.732	ENSCING00000001893	-	71	32.161	Ciona_intestinalis
ENSCSAVG00000008867	-	51	40.206	ENSLACG00000008565	-	63	40.206	Latimeria_chalumnae