EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008902 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 17412 bases
Position: chrreftig_9:896217-913628
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015180	IBN_N	PF03810.19	1.9e-06	1	1
ENSCSAVP00000015179	IBN_N	PF03810.19	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015354	-	3401	-	ENSCSAVP00000015180	1124 (aa)	-	H2ZC64
ENSCSAVT00000015355	-	2370	-	ENSCSAVP00000015181	734 (aa)	-	H2ZC65
ENSCSAVT00000015353	-	3404	-	ENSCSAVP00000015179	1126 (aa)	-	H2ZC63

Gene Model

Click here to download ENSCSAVG00000008902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008902	-	99	38.157	ENSG00000132953	XPO4	99	37.898	Homo_sapiens
ENSCSAVG00000008902	-	99	38.157	ENSAMEG00000014679	XPO4	99	37.898	Ailuropoda_melanoleuca
ENSCSAVG00000008902	-	98	37.056	ENSACIG00000006476	xpo4	100	36.828	Amphilophus_citrinellus
ENSCSAVG00000008902	-	98	38.095	ENSATEG00000001554	xpo4	100	37.831	Anabas_testudineus
ENSCSAVG00000008902	-	98	38.333	ENSAPLG00000003203	XPO4	98	38.070	Anas_platyrhynchos
ENSCSAVG00000008902	-	99	37.901	ENSACAG00000002526	XPO4	99	37.759	Anolis_carolinensis
ENSCSAVG00000008902	-	99	37.307	ENSACLG00000017587	xpo4	99	37.221	Astatotilapia_calliptera
ENSCSAVG00000008902	-	98	38.083	ENSAMXG00000005543	xpo4	100	37.907	Astyanax_mexicanus
ENSCSAVG00000008902	-	99	37.661	ENSBTAG00000003710	XPO4	99	37.403	Bos_taurus
ENSCSAVG00000008902	-	99	38.071	ENSCJAG00000004899	XPO4	99	37.812	Callithrix_jacchus
ENSCSAVG00000008902	-	99	38.157	ENSCAFG00000007222	XPO4	99	41.549	Canis_familiaris
ENSCSAVG00000008902	-	99	37.984	ENSCCAG00000020123	XPO4	99	37.726	Cebus_capucinus
ENSCSAVG00000008902	-	99	38.071	ENSCATG00000036978	XPO4	99	37.812	Cercocebus_atys
ENSCSAVG00000008902	-	78	37.732	ENSCSAG00000018125	XPO4	99	37.623	Chlorocebus_sabaeus
ENSCSAVG00000008902	-	75	62.282	ENSCING00000002840	-	99	61.350	Ciona_intestinalis
ENSCSAVG00000008902	-	99	38.157	ENSCANG00000031628	XPO4	99	37.898	Colobus_angolensis_palliatus
ENSCSAVG00000008902	-	99	38.215	ENSCGRG00001004627	Xpo4	99	37.955	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008902	-	99	38.071	ENSCGRG00000015666	Xpo4	99	37.812	Cricetulus_griseus_crigri
ENSCSAVG00000008902	-	99	37.716	ENSCSEG00000009017	xpo4	99	37.457	Cynoglossus_semilaevis
ENSCSAVG00000008902	-	99	37.967	ENSDARG00000010281	xpo4	99	37.793	Danio_rerio
ENSCSAVG00000008902	-	98	38.000	ENSDNOG00000008001	XPO4	99	37.739	Dasypus_novemcinctus
ENSCSAVG00000008902	-	99	37.435	ENSELUG00000006395	xpo4	99	37.348	Esox_lucius
ENSCSAVG00000008902	-	99	38.157	ENSFCAG00000000855	XPO4	99	37.898	Felis_catus
ENSCSAVG00000008902	-	98	38.354	ENSFALG00000008733	XPO4	98	38.091	Ficedula_albicollis
ENSCSAVG00000008902	-	99	38.157	ENSFDAG00000017460	XPO4	99	37.898	Fukomys_damarensis
ENSCSAVG00000008902	-	98	38.475	ENSFHEG00000015300	xpo4	99	38.300	Fundulus_heteroclitus
ENSCSAVG00000008902	-	99	38.095	ENSGALG00000017132	XPO4	99	37.835	Gallus_gallus
ENSCSAVG00000008902	-	99	37.175	ENSGAFG00000003860	xpo4	99	37.002	Gambusia_affinis
ENSCSAVG00000008902	-	99	38.136	ENSGAGG00000025383	XPO4	97	37.877	Gopherus_agassizii
ENSCSAVG00000008902	-	99	38.157	ENSGGOG00000000890	XPO4	99	37.898	Gorilla_gorilla
ENSCSAVG00000008902	-	99	38.108	ENSHBUG00000003863	xpo4	99	37.847	Haplochromis_burtoni
ENSCSAVG00000008902	-	99	38.243	ENSHGLG00000018113	XPO4	99	37.984	Heterocephalus_glaber_female
ENSCSAVG00000008902	-	99	38.243	ENSHGLG00100011413	XPO4	99	37.984	Heterocephalus_glaber_male
ENSCSAVG00000008902	-	99	37.586	ENSIPUG00000003777	xpo4	99	37.414	Ictalurus_punctatus
ENSCSAVG00000008902	-	99	38.243	ENSSTOG00000010695	XPO4	99	37.984	Ictidomys_tridecemlineatus
ENSCSAVG00000008902	-	99	37.435	ENSKMAG00000013983	xpo4	99	37.177	Kryptolebias_marmoratus
ENSCSAVG00000008902	-	99	37.674	ENSLBEG00000014303	xpo4	99	37.500	Labrus_bergylta
ENSCSAVG00000008902	-	99	34.936	ENSLOCG00000010910	xpo4	100	36.971	Lepisosteus_oculatus
ENSCSAVG00000008902	-	99	37.952	ENSLAFG00000003781	XPO4	99	37.694	Loxodonta_africana
ENSCSAVG00000008902	-	99	38.071	ENSMFAG00000030414	XPO4	99	37.812	Macaca_fascicularis
ENSCSAVG00000008902	-	99	37.984	ENSMNEG00000043776	XPO4	99	37.726	Macaca_nemestrina
ENSCSAVG00000008902	-	99	37.889	ENSMAMG00000020520	xpo4	99	37.716	Mastacembelus_armatus
ENSCSAVG00000008902	-	99	37.307	ENSMZEG00005019337	xpo4	99	37.221	Maylandia_zebra
ENSCSAVG00000008902	-	99	38.071	ENSMICG00000004636	XPO4	99	37.812	Microcebus_murinus
ENSCSAVG00000008902	-	99	38.215	ENSMOCG00000006678	Xpo4	99	37.955	Microtus_ochrogaster
ENSCSAVG00000008902	-	99	36.986	ENSMMOG00000019453	xpo4	99	36.815	Mola_mola
ENSCSAVG00000008902	-	99	38.005	ENSMODG00000008262	XPO4	99	37.747	Monodelphis_domestica
ENSCSAVG00000008902	-	98	36.014	ENSMALG00000018033	xpo4	98	35.752	Monopterus_albus
ENSCSAVG00000008902	-	99	37.967	MGP_CAROLIEiJ_G0019352	Xpo4	99	37.706	Mus_caroli
ENSCSAVG00000008902	-	99	38.141	ENSMUSG00000021952	Xpo4	99	37.880	Mus_musculus
ENSCSAVG00000008902	-	99	38.054	MGP_PahariEiJ_G0030370	Xpo4	99	37.793	Mus_pahari
ENSCSAVG00000008902	-	99	38.141	MGP_SPRETEiJ_G0020246	Xpo4	99	37.880	Mus_spretus
ENSCSAVG00000008902	-	96	41.549	ENSMPUG00000000600	XPO4	99	41.549	Mustela_putorius_furo
ENSCSAVG00000008902	-	98	38.401	ENSMLUG00000012089	-	99	38.141	Myotis_lucifugus
ENSCSAVG00000008902	-	99	37.898	ENSNGAG00000014823	Xpo4	99	37.640	Nannospalax_galili
ENSCSAVG00000008902	-	75	43.421	ENSNBRG00000011410	xpo4	93	43.421	Neolamprologus_brichardi
ENSCSAVG00000008902	-	99	38.071	ENSNLEG00000001816	XPO4	99	37.812	Nomascus_leucogenys
ENSCSAVG00000008902	-	89	38.760	ENSOPRG00000010581	XPO4	89	38.372	Ochotona_princeps
ENSCSAVG00000008902	-	99	38.021	ENSONIG00000015714	xpo4	99	37.760	Oreochromis_niloticus
ENSCSAVG00000008902	-	99	37.955	ENSOANG00000009030	-	98	37.850	Ornithorhynchus_anatinus
ENSCSAVG00000008902	-	99	38.112	ENSOCUG00000008490	XPO4	99	37.854	Oryctolagus_cuniculus
ENSCSAVG00000008902	-	98	37.642	ENSORLG00000013136	xpo4	99	37.467	Oryzias_latipes
ENSCSAVG00000008902	-	98	37.522	ENSORLG00020009218	xpo4	100	37.346	Oryzias_latipes_hni
ENSCSAVG00000008902	-	99	37.446	ENSORLG00015012168	xpo4	99	37.274	Oryzias_latipes_hsok
ENSCSAVG00000008902	-	98	36.860	ENSOMEG00000009492	xpo4	100	36.719	Oryzias_melastigma
ENSCSAVG00000008902	-	98	38.207	ENSOGAG00000000048	XPO4	98	37.946	Otolemur_garnettii
ENSCSAVG00000008902	-	98	37.793	ENSOARG00000013784	XPO4	99	37.533	Ovis_aries
ENSCSAVG00000008902	-	99	38.157	ENSPPAG00000031464	XPO4	99	37.898	Pan_paniscus
ENSCSAVG00000008902	-	99	37.984	ENSPPRG00000017050	XPO4	99	37.726	Panthera_pardus
ENSCSAVG00000008902	-	99	38.071	ENSPANG00000001765	XPO4	99	37.812	Papio_anubis
ENSCSAVG00000008902	-	99	37.533	ENSPKIG00000001940	xpo4	99	37.359	Paramormyrops_kingsleyae
ENSCSAVG00000008902	-	88	41.549	ENSPSIG00000006908	XPO4	99	41.549	Pelodiscus_sinensis
ENSCSAVG00000008902	-	99	38.302	ENSPEMG00000017255	Xpo4	99	38.042	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008902	-	99	37.887	ENSPCIG00000000193	XPO4	99	37.826	Phascolarctos_cinereus
ENSCSAVG00000008902	-	99	38.095	ENSPFOG00000005062	xpo4	99	37.922	Poecilia_formosa
ENSCSAVG00000008902	-	99	36.038	ENSPLAG00000001184	xpo4	99	35.864	Poecilia_latipinna
ENSCSAVG00000008902	-	99	36.038	ENSPMEG00000016525	xpo4	99	35.864	Poecilia_mexicana
ENSCSAVG00000008902	-	99	37.922	ENSPREG00000000899	xpo4	99	37.749	Poecilia_reticulata
ENSCSAVG00000008902	-	99	38.071	ENSPPYG00000005196	XPO4	99	37.812	Pongo_abelii
ENSCSAVG00000008902	-	94	37.603	ENSPCAG00000004580	XPO4	94	36.983	Procavia_capensis
ENSCSAVG00000008902	-	90	34.464	ENSPCOG00000013299	-	97	34.464	Propithecus_coquereli
ENSCSAVG00000008902	-	99	37.307	ENSPNYG00000006605	xpo4	99	37.221	Pundamilia_nyererei
ENSCSAVG00000008902	-	99	37.967	ENSPNAG00000005781	xpo4	99	37.706	Pygocentrus_nattereri
ENSCSAVG00000008902	-	99	38.128	ENSRNOG00000010137	Xpo4	99	37.868	Rattus_norvegicus
ENSCSAVG00000008902	-	99	38.157	ENSRROG00000034581	XPO4	99	37.898	Rhinopithecus_roxellana
ENSCSAVG00000008902	-	99	37.984	ENSSBOG00000020841	XPO4	99	37.726	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008902	-	90	37.347	ENSSHAG00000006069	XPO4	99	37.065	Sarcophilus_harrisii
ENSCSAVG00000008902	-	98	38.217	ENSSFOG00015001025	xpo4	100	38.041	Scleropages_formosus
ENSCSAVG00000008902	-	99	37.674	ENSSMAG00000007828	xpo4	99	37.500	Scophthalmus_maximus
ENSCSAVG00000008902	-	90	35.266	ENSSDUG00000013955	xpo4	92	35.076	Seriola_dumerili
ENSCSAVG00000008902	-	99	36.719	ENSSLDG00000013233	xpo4	99	36.545	Seriola_lalandi_dorsalis
ENSCSAVG00000008902	-	98	37.652	ENSSPUG00000014529	XPO4	99	37.478	Sphenodon_punctatus
ENSCSAVG00000008902	-	88	41.549	ENSSSCG00000009276	XPO4	99	41.549	Sus_scrofa
ENSCSAVG00000008902	-	98	38.058	ENSTGUG00000011343	XPO4	100	37.795	Taeniopygia_guttata
ENSCSAVG00000008902	-	99	37.751	ENSTRUG00000015851	xpo4	99	37.522	Takifugu_rubripes
ENSCSAVG00000008902	-	99	37.630	ENSTNIG00000015669	xpo4	99	37.370	Tetraodon_nigroviridis
ENSCSAVG00000008902	-	99	37.747	ENSTTRG00000015597	XPO4	99	37.489	Tursiops_truncatus
ENSCSAVG00000008902	-	92	40.845	ENSXCOG00000018340	xpo4	96	40.845	Xiphophorus_couchianus
ENSCSAVG00000008902	-	99	36.860	ENSXMAG00000014884	xpo4	99	36.689	Xiphophorus_maculatus