EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008916 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 17153 bases
Position: chrreftig_0:1645747-1662899
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015200	DBP10CT	PF08147.12	9.8e-18	1	1
ENSCSAVP00000015198	DBP10CT	PF08147.12	1e-17	1	1
ENSCSAVP00000015197	DBP10CT	PF08147.12	1.1e-17	1	1
ENSCSAVP00000015201	DBP10CT	PF08147.12	1.1e-17	1	1
ENSCSAVP00000015199	DBP10CT	PF08147.12	1.1e-17	1	1
ENSCSAVP00000015202	ResIII	PF04851.15	1.6e-07	1	1
ENSCSAVP00000015205	ResIII	PF04851.15	2.8e-07	1	1
ENSCSAVP00000015203	ResIII	PF04851.15	3.3e-07	1	1
ENSCSAVP00000015204	ResIII	PF04851.15	3.5e-07	1	1
ENSCSAVP00000015202	DEAD	PF00270.29	3.8e-53	1	1
ENSCSAVP00000015205	DEAD	PF00270.29	1.3e-52	1	1
ENSCSAVP00000015200	DEAD	PF00270.29	2e-52	1	1
ENSCSAVP00000015198	DEAD	PF00270.29	2.5e-52	1	1
ENSCSAVP00000015197	DEAD	PF00270.29	2.8e-52	1	1
ENSCSAVP00000015199	DEAD	PF00270.29	2.9e-52	1	1
ENSCSAVP00000015201	DEAD	PF00270.29	3.3e-52	1	1
ENSCSAVP00000015203	DEAD	PF00270.29	1.6e-51	1	1
ENSCSAVP00000015204	DEAD	PF00270.29	1.7e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015378	-	969	-	ENSCSAVP00000015204	323 (aa)	-	H2ZC88
ENSCSAVT00000015379	-	987	-	ENSCSAVP00000015205	329 (aa)	-	H2ZC89
ENSCSAVT00000015374	-	2265	-	ENSCSAVP00000015200	688 (aa)	-	H2ZC84
ENSCSAVT00000015375	-	2387	-	ENSCSAVP00000015201	760 (aa)	-	H2ZC85
ENSCSAVT00000015376	-	1017	-	ENSCSAVP00000015202	339 (aa)	-	H2ZC86
ENSCSAVT00000015377	-	981	-	ENSCSAVP00000015203	327 (aa)	-	H2ZC87
ENSCSAVT00000015371	-	2442	-	ENSCSAVP00000015197	754 (aa)	-	H2ZC81
ENSCSAVT00000015372	-	2289	-	ENSCSAVP00000015198	705 (aa)	-	H2ZC82
ENSCSAVT00000015373	-	2446	-	ENSCSAVP00000015199	762 (aa)	-	H2ZC83

Gene Model

Click here to download ENSCSAVG00000008916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008916	-	100	33.989	ENSCSAVG00000003375	-	68	33.854
ENSCSAVG00000008916	-	91	34.314	ENSCSAVG00000002180	-	86	36.086
ENSCSAVG00000008916	-	62	37.255	ENSCSAVG00000011266	-	77	30.491
ENSCSAVG00000008916	-	94	32.012	ENSCSAVG00000003835	-	82	31.642
ENSCSAVG00000008916	-	100	35.799	ENSCSAVG00000002353	-	72	36.918
ENSCSAVG00000008916	-	98	35.693	ENSCSAVG00000000522	-	83	36.798
ENSCSAVG00000008916	-	85	31.250	ENSCSAVG00000006949	-	65	33.544
ENSCSAVG00000008916	-	98	30.256	ENSCSAVG00000001436	-	55	30.256
ENSCSAVG00000008916	-	98	36.095	ENSCSAVG00000003023	-	63	35.674
ENSCSAVG00000008916	-	100	45.000	ENSCSAVG00000003028	-	55	47.273
ENSCSAVG00000008916	-	100	31.844	ENSCSAVG00000004304	-	56	33.708
ENSCSAVG00000008916	-	100	30.422	ENSCSAVG00000003045	-	89	30.573
ENSCSAVG00000008916	-	100	35.277	ENSCSAVG00000004895	-	66	34.278
ENSCSAVG00000008916	-	95	31.818	ENSCSAVG00000004227	-	71	32.162
ENSCSAVG00000008916	-	61	31.250	ENSCSAVG00000000630	-	92	30.199
ENSCSAVG00000008916	-	96	34.921	ENSCSAVG00000011566	-	78	34.916
ENSCSAVG00000008916	-	100	30.581	ENSCSAVG00000009920	-	96	31.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008916	-	98	66.566	ENSG00000123064	DDX54	100	72.596	Homo_sapiens
ENSCSAVG00000008916	-	98	70.181	ENSAPOG00000008602	ddx54	92	51.953	Acanthochromis_polyacanthus
ENSCSAVG00000008916	-	59	69.430	ENSAPOG00000017587	-	88	69.430	Acanthochromis_polyacanthus
ENSCSAVG00000008916	-	98	68.072	ENSAMEG00000008775	DDX54	88	51.075	Ailuropoda_melanoleuca
ENSCSAVG00000008916	-	98	71.084	ENSACIG00000019104	ddx54	90	52.903	Amphilophus_citrinellus
ENSCSAVG00000008916	-	98	69.880	ENSAOCG00000008449	ddx54	90	53.137	Amphiprion_ocellaris
ENSCSAVG00000008916	-	98	69.880	ENSAPEG00000014287	ddx54	90	53.137	Amphiprion_percula
ENSCSAVG00000008916	-	98	70.482	ENSATEG00000018529	ddx54	90	52.558	Anabas_testudineus
ENSCSAVG00000008916	-	98	71.988	ENSAPLG00000013191	DDX54	92	53.333	Anas_platyrhynchos
ENSCSAVG00000008916	-	98	69.277	ENSACAG00000004703	DDX54	90	51.895	Anolis_carolinensis
ENSCSAVG00000008916	-	99	60.486	ENSANAG00000032241	-	87	47.436	Aotus_nancymaae
ENSCSAVG00000008916	-	98	47.941	ENSANAG00000032761	-	88	42.893	Aotus_nancymaae
ENSCSAVG00000008916	-	98	70.783	ENSACLG00000013176	ddx54	90	53.548	Astatotilapia_calliptera
ENSCSAVG00000008916	-	98	70.997	ENSAMXG00000009189	ddx54	89	54.759	Astyanax_mexicanus
ENSCSAVG00000008916	-	98	67.771	ENSBTAG00000011930	DDX54	83	51.282	Bos_taurus
ENSCSAVG00000008916	-	100	61.329	WBGene00022378	Y94H6A.5	92	45.254	Caenorhabditis_elegans
ENSCSAVG00000008916	-	98	66.867	ENSCJAG00000010039	DDX54	79	51.687	Callithrix_jacchus
ENSCSAVG00000008916	-	69	41.360	ENSCAFG00000009029	DDX54	94	42.413	Canis_familiaris
ENSCSAVG00000008916	-	98	67.771	ENSCAFG00020017643	DDX54	88	51.151	Canis_lupus_dingo
ENSCSAVG00000008916	-	98	65.060	ENSCHIG00000026798	DDX54	88	49.871	Capra_hircus
ENSCSAVG00000008916	-	98	60.843	ENSTSYG00000007898	DDX54	89	48.285	Carlito_syrichta
ENSCSAVG00000008916	-	98	66.265	ENSCAPG00000001482	DDX54	92	47.644	Cavia_aperea
ENSCSAVG00000008916	-	98	66.566	ENSCPOG00000020649	DDX54	88	50.000	Cavia_porcellus
ENSCSAVG00000008916	-	98	67.169	ENSCCAG00000022625	DDX54	88	51.667	Cebus_capucinus
ENSCSAVG00000008916	-	98	66.867	ENSCATG00000041943	DDX54	88	50.445	Cercocebus_atys
ENSCSAVG00000008916	-	98	66.867	ENSCLAG00000010748	DDX54	88	52.005	Chinchilla_lanigera
ENSCSAVG00000008916	-	98	66.566	ENSCSAG00000002432	DDX54	85	50.000	Chlorocebus_sabaeus
ENSCSAVG00000008916	-	62	69.378	ENSCPBG00000017982	DDX54	80	48.856	Chrysemys_picta_bellii
ENSCSAVG00000008916	-	98	90.634	ENSCING00000004789	-	95	77.992	Ciona_intestinalis
ENSCSAVG00000008916	-	94	72.487	ENSCANG00000020637	DDX54	94	44.162	Colobus_angolensis_palliatus
ENSCSAVG00000008916	-	98	67.771	ENSCGRG00001014803	Ddx54	88	51.605	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008916	-	98	67.771	ENSCGRG00000002827	Ddx54	88	51.476	Cricetulus_griseus_crigri
ENSCSAVG00000008916	-	98	69.277	ENSCSEG00000016462	ddx54	90	52.135	Cynoglossus_semilaevis
ENSCSAVG00000008916	-	98	70.783	ENSCVAG00000022404	ddx54	90	53.342	Cyprinodon_variegatus
ENSCSAVG00000008916	-	98	69.277	ENSDARG00000105286	ddx54	91	52.698	Danio_rerio
ENSCSAVG00000008916	-	98	66.867	ENSDNOG00000032913	DDX54	88	51.086	Dasypus_novemcinctus
ENSCSAVG00000008916	-	66	65.471	ENSDORG00000003399	Ddx54	88	47.385	Dipodomys_ordii
ENSCSAVG00000008916	-	100	61.493	FBgn0052344	CG32344	93	46.193	Drosophila_melanogaster
ENSCSAVG00000008916	-	98	66.867	ENSEBUG00000008886	ddx54	90	53.701	Eptatretus_burgeri
ENSCSAVG00000008916	-	98	60.119	ENSEASG00005009501	DDX54	96	44.974	Equus_asinus_asinus
ENSCSAVG00000008916	-	98	67.169	ENSECAG00000012890	DDX54	88	51.139	Equus_caballus
ENSCSAVG00000008916	-	61	74.684	ENSEEUG00000008296	-	64	74.684	Erinaceus_europaeus
ENSCSAVG00000008916	-	98	71.084	ENSELUG00000013533	ddx54	90	51.195	Esox_lucius
ENSCSAVG00000008916	-	98	67.771	ENSFCAG00000027806	DDX54	88	51.279	Felis_catus
ENSCSAVG00000008916	-	98	69.578	ENSFALG00000007737	DDX54	95	52.878	Ficedula_albicollis
ENSCSAVG00000008916	-	98	67.169	ENSFDAG00000019953	DDX54	87	67.436	Fukomys_damarensis
ENSCSAVG00000008916	-	98	70.482	ENSFHEG00000018425	ddx54	90	52.692	Fundulus_heteroclitus
ENSCSAVG00000008916	-	98	70.181	ENSGMOG00000011746	ddx54	93	52.806	Gadus_morhua
ENSCSAVG00000008916	-	98	70.482	ENSGALG00000007490	DDX54	90	53.836	Gallus_gallus
ENSCSAVG00000008916	-	98	70.783	ENSGAFG00000010336	ddx54	90	51.804	Gambusia_affinis
ENSCSAVG00000008916	-	98	69.880	ENSGACG00000016793	ddx54	91	51.925	Gasterosteus_aculeatus
ENSCSAVG00000008916	-	98	68.976	ENSGAGG00000022803	DDX54	97	51.684	Gopherus_agassizii
ENSCSAVG00000008916	-	98	66.867	ENSGGOG00000010414	DDX54	88	50.573	Gorilla_gorilla
ENSCSAVG00000008916	-	98	66.265	ENSHGLG00000014411	DDX54	88	50.832	Heterocephalus_glaber_female
ENSCSAVG00000008916	-	98	66.265	ENSHGLG00100018511	DDX54	88	50.897	Heterocephalus_glaber_male
ENSCSAVG00000008916	-	98	69.880	ENSHCOG00000019287	ddx54	90	51.469	Hippocampus_comes
ENSCSAVG00000008916	-	98	70.482	ENSIPUG00000015556	Ddx54	91	52.459	Ictalurus_punctatus
ENSCSAVG00000008916	-	94	68.139	ENSSTOG00000004068	DDX54	96	50.200	Ictidomys_tridecemlineatus
ENSCSAVG00000008916	-	98	67.771	ENSJJAG00000015712	Ddx54	88	50.900	Jaculus_jaculus
ENSCSAVG00000008916	-	98	69.578	ENSKMAG00000017520	ddx54	90	52.264	Kryptolebias_marmoratus
ENSCSAVG00000008916	-	98	71.084	ENSLBEG00000019480	ddx54	91	51.584	Labrus_bergylta
ENSCSAVG00000008916	-	98	69.578	ENSLACG00000008944	DDX54	85	53.272	Latimeria_chalumnae
ENSCSAVG00000008916	-	98	71.386	ENSLOCG00000008485	ddx54	91	54.698	Lepisosteus_oculatus
ENSCSAVG00000008916	-	100	53.709	ENSLAFG00000027782	DDX54	96	44.916	Loxodonta_africana
ENSCSAVG00000008916	-	98	66.867	ENSMFAG00000043636	DDX54	88	50.635	Macaca_fascicularis
ENSCSAVG00000008916	-	98	66.867	ENSMMUG00000021795	DDX54	88	50.697	Macaca_mulatta
ENSCSAVG00000008916	-	100	56.798	ENSMNEG00000043605	DDX54	88	46.134	Macaca_nemestrina
ENSCSAVG00000008916	-	98	61.145	ENSMLEG00000038981	DDX54	88	48.539	Mandrillus_leucophaeus
ENSCSAVG00000008916	-	98	69.880	ENSMAMG00000012784	ddx54	90	52.296	Mastacembelus_armatus
ENSCSAVG00000008916	-	98	70.783	ENSMZEG00005018773	ddx54	90	52.767	Maylandia_zebra
ENSCSAVG00000008916	-	98	70.482	ENSMGAG00000009183	DDX54	93	52.542	Meleagris_gallopavo
ENSCSAVG00000008916	-	98	67.771	ENSMAUG00000011051	Ddx54	88	50.579	Mesocricetus_auratus
ENSCSAVG00000008916	-	98	66.867	ENSMICG00000012217	DDX54	88	50.834	Microcebus_murinus
ENSCSAVG00000008916	-	98	68.072	ENSMOCG00000010835	Ddx54	88	51.671	Microtus_ochrogaster
ENSCSAVG00000008916	-	98	71.084	ENSMMOG00000009634	ddx54	88	53.519	Mola_mola
ENSCSAVG00000008916	-	98	68.072	ENSMODG00000003413	DDX54	92	51.546	Monodelphis_domestica
ENSCSAVG00000008916	-	98	70.783	ENSMALG00000022098	ddx54	90	53.290	Monopterus_albus
ENSCSAVG00000008916	-	98	67.169	MGP_CAROLIEiJ_G0027665	Ddx54	88	51.799	Mus_caroli
ENSCSAVG00000008916	-	98	67.470	ENSMUSG00000029599	Ddx54	88	51.866	Mus_musculus
ENSCSAVG00000008916	-	98	66.867	MGP_PahariEiJ_G0024247	Ddx54	88	51.351	Mus_pahari
ENSCSAVG00000008916	-	98	67.169	MGP_SPRETEiJ_G0028665	Ddx54	88	51.799	Mus_spretus
ENSCSAVG00000008916	-	98	67.771	ENSMPUG00000002574	DDX54	88	50.824	Mustela_putorius_furo
ENSCSAVG00000008916	-	58	34.118	ENSMLUG00000026417	-	99	35.539	Myotis_lucifugus
ENSCSAVG00000008916	-	98	66.766	ENSMLUG00000004684	-	97	67.222	Myotis_lucifugus
ENSCSAVG00000008916	-	54	36.126	ENSMLUG00000025894	-	99	36.745	Myotis_lucifugus
ENSCSAVG00000008916	-	58	36.429	ENSMLUG00000029964	-	99	37.381	Myotis_lucifugus
ENSCSAVG00000008916	-	98	67.771	ENSNGAG00000021313	Ddx54	88	51.220	Nannospalax_galili
ENSCSAVG00000008916	-	97	70.821	ENSNBRG00000005588	ddx54	64	71.510	Neolamprologus_brichardi
ENSCSAVG00000008916	-	98	66.867	ENSNLEG00000000162	DDX54	88	51.223	Nomascus_leucogenys
ENSCSAVG00000008916	-	100	65.465	ENSMEUG00000015392	DDX54	99	52.586	Notamacropus_eugenii
ENSCSAVG00000008916	-	89	66.777	ENSOPRG00000012000	DDX54	76	67.000	Ochotona_princeps
ENSCSAVG00000008916	-	98	64.157	ENSODEG00000014863	DDX54	88	49.233	Octodon_degus
ENSCSAVG00000008916	-	98	66.265	ENSOCUG00000008932	DDX54	88	49.808	Oryctolagus_cuniculus
ENSCSAVG00000008916	-	98	70.482	ENSORLG00000007385	ddx54	90	52.911	Oryzias_latipes
ENSCSAVG00000008916	-	98	70.783	ENSORLG00020000858	ddx54	89	53.351	Oryzias_latipes_hni
ENSCSAVG00000008916	-	98	70.783	ENSORLG00015006956	ddx54	90	53.040	Oryzias_latipes_hsok
ENSCSAVG00000008916	-	98	69.880	ENSOMEG00000003663	ddx54	90	52.767	Oryzias_melastigma
ENSCSAVG00000008916	-	98	66.867	ENSOGAG00000004210	DDX54	88	51.080	Otolemur_garnettii
ENSCSAVG00000008916	-	98	67.771	ENSOARG00000008363	DDX54	88	49.937	Ovis_aries
ENSCSAVG00000008916	-	98	66.566	ENSPPAG00000042178	DDX54	88	51.080	Pan_paniscus
ENSCSAVG00000008916	-	100	63.333	ENSPPRG00000005223	DDX54	88	50.706	Panthera_pardus
ENSCSAVG00000008916	-	100	54.154	ENSPTIG00000019728	DDX54	60	73.034	Panthera_tigris_altaica
ENSCSAVG00000008916	-	98	66.566	ENSPTRG00000005483	DDX54	88	50.893	Pan_troglodytes
ENSCSAVG00000008916	-	98	66.867	ENSPANG00000008883	DDX54	88	50.317	Papio_anubis
ENSCSAVG00000008916	-	98	69.880	ENSPKIG00000018272	ddx54	89	53.053	Paramormyrops_kingsleyae
ENSCSAVG00000008916	-	98	70.783	ENSPSIG00000005055	DDX54	89	68.910	Pelodiscus_sinensis
ENSCSAVG00000008916	-	96	69.753	ENSPMGG00000010988	ddx54	94	51.647	Periophthalmus_magnuspinnatus
ENSCSAVG00000008916	-	98	67.470	ENSPEMG00000016701	Ddx54	88	50.449	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008916	-	98	72.289	ENSPMAG00000004337	ddx54	97	74.352	Petromyzon_marinus
ENSCSAVG00000008916	-	98	69.880	ENSPFOG00000019822	ddx54	90	52.571	Poecilia_formosa
ENSCSAVG00000008916	-	98	69.880	ENSPLAG00000004530	ddx54	90	52.571	Poecilia_latipinna
ENSCSAVG00000008916	-	98	70.181	ENSPMEG00000010803	ddx54	90	52.699	Poecilia_mexicana
ENSCSAVG00000008916	-	98	69.880	ENSPREG00000014372	ddx54	90	53.093	Poecilia_reticulata
ENSCSAVG00000008916	-	98	66.867	ENSPPYG00000004984	DDX54	88	50.699	Pongo_abelii
ENSCSAVG00000008916	-	100	61.538	ENSPCAG00000008462	DDX54	88	47.809	Procavia_capensis
ENSCSAVG00000008916	-	98	66.265	ENSPCOG00000006050	DDX54	88	50.579	Propithecus_coquereli
ENSCSAVG00000008916	-	89	75.500	ENSPVAG00000017347	DDX54	80	72.936	Pteropus_vampyrus
ENSCSAVG00000008916	-	98	70.783	ENSPNAG00000014459	ddx54	91	55.096	Pygocentrus_nattereri
ENSCSAVG00000008916	-	100	65.257	ENSRNOG00000001377	Ddx54	84	51.226	Rattus_norvegicus
ENSCSAVG00000008916	-	98	66.867	ENSRBIG00000032535	DDX54	88	50.888	Rhinopithecus_bieti
ENSCSAVG00000008916	-	98	59.281	ENSRROG00000029557	DDX54	88	47.661	Rhinopithecus_roxellana
ENSCSAVG00000008916	-	100	48.549	YDL031W	-	79	46.452	Saccharomyces_cerevisiae
ENSCSAVG00000008916	-	98	66.867	ENSSBOG00000028194	DDX54	88	51.341	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008916	-	97	70.000	ENSSHAG00000015646	DDX54	94	50.963	Sarcophilus_harrisii
ENSCSAVG00000008916	-	98	70.482	ENSSFOG00015014981	ddx54	89	53.018	Scleropages_formosus
ENSCSAVG00000008916	-	98	69.578	ENSSMAG00000003210	ddx54	92	52.174	Scophthalmus_maximus
ENSCSAVG00000008916	-	98	69.880	ENSSDUG00000004474	ddx54	88	52.448	Seriola_dumerili
ENSCSAVG00000008916	-	98	69.880	ENSSLDG00000010380	ddx54	88	53.024	Seriola_lalandi_dorsalis
ENSCSAVG00000008916	-	98	70.482	ENSSPUG00000014141	DDX54	90	53.077	Sphenodon_punctatus
ENSCSAVG00000008916	-	98	66.867	ENSSPAG00000022918	ddx54	92	50.773	Stegastes_partitus
ENSCSAVG00000008916	-	98	67.771	ENSSSCG00000009876	DDX54	89	50.986	Sus_scrofa
ENSCSAVG00000008916	-	98	68.072	ENSTGUG00000009126	DDX54	96	51.157	Taeniopygia_guttata
ENSCSAVG00000008916	-	98	72.590	ENSTRUG00000014939	ddx54	91	53.359	Takifugu_rubripes
ENSCSAVG00000008916	-	98	71.687	ENSTNIG00000009037	ddx54	90	52.564	Tetraodon_nigroviridis
ENSCSAVG00000008916	-	100	66.066	ENSTBEG00000003783	DDX54	67	68.622	Tupaia_belangeri
ENSCSAVG00000008916	-	98	61.145	ENSTTRG00000016678	DDX54	88	48.662	Tursiops_truncatus
ENSCSAVG00000008916	-	98	68.373	ENSUAMG00000028387	DDX54	94	51.181	Ursus_americanus
ENSCSAVG00000008916	-	98	68.373	ENSUMAG00000010245	DDX54	94	70.079	Ursus_maritimus
ENSCSAVG00000008916	-	98	67.771	ENSVVUG00000010212	DDX54	88	51.151	Vulpes_vulpes
ENSCSAVG00000008916	-	97	67.879	ENSXETG00000016410	ddx54	89	52.659	Xenopus_tropicalis
ENSCSAVG00000008916	-	98	70.181	ENSXCOG00000002909	ddx54	90	53.040	Xiphophorus_couchianus
ENSCSAVG00000008916	-	98	70.181	ENSXMAG00000005312	ddx54	90	52.828	Xiphophorus_maculatus