EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000008992 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4815 bases
Position: chrreftig_48:781178-785992
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015325	Isy1	PF06246.12	2.1e-95	1	1
ENSCSAVP00000015326	Isy1	PF06246.12	4.5e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015502	-	948	-	ENSCSAVP00000015326	302 (aa)	-	H2ZCL0
ENSCSAVT00000015501	-	1258	-	ENSCSAVP00000015325	279 (aa)	-	H2ZCK9

Gene Model

Click here to download ENSCSAVG00000008992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008992	-	99	64.014	ENSG00000240682	ISY1	99	65.141	Homo_sapiens
ENSCSAVG00000008992	-	100	63.793	ENSG00000261796	ISY1-RAB43	86	64.912	Homo_sapiens
ENSCSAVG00000008992	-	99	63.322	ENSAMEG00000015341	-	86	64.437	Ailuropoda_melanoleuca
ENSCSAVG00000008992	-	64	73.184	ENSACIG00000014723	isy1	72	73.184	Amphilophus_citrinellus
ENSCSAVG00000008992	-	100	64.111	ENSAOCG00000007147	isy1	100	64.111	Amphiprion_ocellaris
ENSCSAVG00000008992	-	100	57.460	ENSAPEG00000021883	isy1	100	57.460	Amphiprion_percula
ENSCSAVG00000008992	-	64	64.607	ENSATEG00000009521	isy1	74	64.286	Anabas_testudineus
ENSCSAVG00000008992	-	99	56.584	ENSAPLG00000014136	-	99	56.584	Anas_platyrhynchos
ENSCSAVG00000008992	-	91	61.089	ENSACAG00000013166	-	100	61.832	Anolis_carolinensis
ENSCSAVG00000008992	-	99	63.668	ENSANAG00000027120	-	99	65.141	Aotus_nancymaae
ENSCSAVG00000008992	-	100	58.885	ENSACLG00000014430	isy1	100	58.885	Astatotilapia_calliptera
ENSCSAVG00000008992	-	100	63.448	ENSAMXG00000005423	isy1	100	63.448	Astyanax_mexicanus
ENSCSAVG00000008992	-	100	62.324	ENSBTAG00000030915	ISY1	100	63.732	Bos_taurus
ENSCSAVG00000008992	-	94	45.353	WBGene00009966	isy-1	99	45.896	Caenorhabditis_elegans
ENSCSAVG00000008992	-	99	64.014	ENSCJAG00000017419	-	99	65.141	Callithrix_jacchus
ENSCSAVG00000008992	-	99	63.322	ENSCAFG00000004333	ISY1	99	64.437	Canis_familiaris
ENSCSAVG00000008992	-	99	63.322	ENSCAFG00020004867	-	99	64.437	Canis_lupus_dingo
ENSCSAVG00000008992	-	100	63.322	ENSCHIG00000008237	-	100	63.322	Capra_hircus
ENSCSAVG00000008992	-	99	64.014	ENSTSYG00000013897	-	99	65.141	Carlito_syrichta
ENSCSAVG00000008992	-	97	53.285	ENSCAPG00000016359	-	99	53.285	Cavia_aperea
ENSCSAVG00000008992	-	99	63.668	ENSCPOG00000014735	-	99	64.789	Cavia_porcellus
ENSCSAVG00000008992	-	99	64.014	ENSCCAG00000028517	-	99	65.141	Cebus_capucinus
ENSCSAVG00000008992	-	99	64.360	ENSCATG00000030672	-	99	65.493	Cercocebus_atys
ENSCSAVG00000008992	-	99	63.448	ENSCLAG00000007518	-	99	64.483	Chinchilla_lanigera
ENSCSAVG00000008992	-	99	64.360	ENSCSAG00000008798	-	99	65.493	Chlorocebus_sabaeus
ENSCSAVG00000008992	-	100	63.345	ENSCPBG00000026346	-	100	63.763	Chrysemys_picta_bellii
ENSCSAVG00000008992	-	99	89.964	ENSCING00000000716	-	99	89.964	Ciona_intestinalis
ENSCSAVG00000008992	-	99	64.360	ENSCANG00000037761	-	99	65.493	Colobus_angolensis_palliatus
ENSCSAVG00000008992	-	99	64.014	ENSCGRG00001003415	Isy1	99	64.789	Cricetulus_griseus_chok1gshd
ENSCSAVG00000008992	-	99	64.014	ENSCGRG00000011641	Isy1	99	64.789	Cricetulus_griseus_crigri
ENSCSAVG00000008992	-	88	58.661	ENSCSEG00000020382	isy1	96	59.459	Cynoglossus_semilaevis
ENSCSAVG00000008992	-	100	65.141	ENSCVAG00000000650	isy1	100	65.141	Cyprinodon_variegatus
ENSCSAVG00000008992	-	100	63.322	ENSDARG00000063466	isy1	100	63.322	Danio_rerio
ENSCSAVG00000008992	-	99	63.103	ENSDNOG00000002763	-	99	63.860	Dasypus_novemcinctus
ENSCSAVG00000008992	-	96	62.989	ENSDORG00000006886	Isy1	99	63.768	Dipodomys_ordii
ENSCSAVG00000008992	-	95	54.982	FBgn0037550	CG9667	99	56.089	Drosophila_melanogaster
ENSCSAVG00000008992	-	96	64.234	ENSETEG00000017009	-	100	65.328	Echinops_telfairi
ENSCSAVG00000008992	-	96	60.498	ENSEASG00005015810	-	97	61.594	Equus_asinus_asinus
ENSCSAVG00000008992	-	94	63.370	ENSECAG00000013768	-	88	64.552	Equus_caballus
ENSCSAVG00000008992	-	100	61.724	ENSELUG00000000489	isy1	100	61.724	Esox_lucius
ENSCSAVG00000008992	-	99	63.322	ENSFCAG00000008664	-	99	64.437	Felis_catus
ENSCSAVG00000008992	-	100	64.437	ENSFALG00000000023	-	100	65.845	Ficedula_albicollis
ENSCSAVG00000008992	-	100	61.620	ENSFALG00000014998	-	100	62.324	Ficedula_albicollis
ENSCSAVG00000008992	-	96	62.766	ENSFDAG00000012661	-	94	63.830	Fukomys_damarensis
ENSCSAVG00000008992	-	100	63.701	ENSFHEG00000006776	isy1	100	64.912	Fundulus_heteroclitus
ENSCSAVG00000008992	-	77	74.286	ENSGMOG00000005635	isy1	74	74.286	Gadus_morhua
ENSCSAVG00000008992	-	100	63.214	ENSGALG00000005012	-	100	63.986	Gallus_gallus
ENSCSAVG00000008992	-	98	63.345	ENSGAFG00000019550	isy1	100	64.413	Gambusia_affinis
ENSCSAVG00000008992	-	100	62.633	ENSGACG00000003342	isy1	100	63.415	Gasterosteus_aculeatus
ENSCSAVG00000008992	-	97	63.100	ENSGAGG00000021274	-	97	61.923	Gopherus_agassizii
ENSCSAVG00000008992	-	99	64.014	ENSGGOG00000038733	ISY1	99	65.141	Gorilla_gorilla
ENSCSAVG00000008992	-	98	49.301	ENSHGLG00000017889	-	79	50.699	Heterocephalus_glaber_female
ENSCSAVG00000008992	-	99	63.509	ENSHGLG00000002576	-	99	64.583	Heterocephalus_glaber_female
ENSCSAVG00000008992	-	98	49.301	ENSHGLG00100005531	-	79	50.699	Heterocephalus_glaber_male
ENSCSAVG00000008992	-	99	61.888	ENSHGLG00100004254	-	99	63.194	Heterocephalus_glaber_male
ENSCSAVG00000008992	-	99	61.246	ENSHCOG00000014775	isy1	99	61.246	Hippocampus_comes
ENSCSAVG00000008992	-	100	62.759	ENSIPUG00000011379	Isy1	100	63.793	Ictalurus_punctatus
ENSCSAVG00000008992	-	99	64.014	ENSSTOG00000024769	-	99	64.706	Ictidomys_tridecemlineatus
ENSCSAVG00000008992	-	77	60.987	ENSJJAG00000009635	Isy1	95	62.389	Jaculus_jaculus
ENSCSAVG00000008992	-	100	62.021	ENSLACG00000004490	isy1	100	63.763	Latimeria_chalumnae
ENSCSAVG00000008992	-	100	60.554	ENSLOCG00000013988	isy1	100	61.592	Lepisosteus_oculatus
ENSCSAVG00000008992	-	99	57.244	ENSLAFG00000004015	-	99	58.304	Loxodonta_africana
ENSCSAVG00000008992	-	99	64.360	ENSMFAG00000037074	-	99	65.493	Macaca_fascicularis
ENSCSAVG00000008992	-	100	64.138	ENSMMUG00000011580	ISY1-RAB43	99	65.493	Macaca_mulatta
ENSCSAVG00000008992	-	99	56.944	ENSMNEG00000043206	ISY1	99	57.951	Macaca_nemestrina
ENSCSAVG00000008992	-	99	64.360	ENSMLEG00000033836	-	99	65.493	Mandrillus_leucophaeus
ENSCSAVG00000008992	-	100	64.236	ENSMAMG00000009501	isy1	100	64.236	Mastacembelus_armatus
ENSCSAVG00000008992	-	100	63.415	ENSMZEG00005012021	isy1	100	65.157	Maylandia_zebra
ENSCSAVG00000008992	-	99	63.121	ENSMGAG00000005181	-	99	63.380	Meleagris_gallopavo
ENSCSAVG00000008992	-	99	64.014	ENSMAUG00000008793	Isy1	99	64.789	Mesocricetus_auratus
ENSCSAVG00000008992	-	96	63.571	ENSMICG00000037547	-	99	64.621	Microcebus_murinus
ENSCSAVG00000008992	-	99	64.014	ENSMOCG00000000472	Isy1	99	65.141	Microtus_ochrogaster
ENSCSAVG00000008992	-	99	58.076	ENSMMOG00000017810	isy1	99	58.076	Mola_mola
ENSCSAVG00000008992	-	100	63.475	ENSMODG00000008387	-	100	64.111	Monodelphis_domestica
ENSCSAVG00000008992	-	100	61.620	ENSMALG00000020650	isy1	100	62.630	Monopterus_albus
ENSCSAVG00000008992	-	99	64.014	MGP_CAROLIEiJ_G0028619	Isy1	98	71.429	Mus_caroli
ENSCSAVG00000008992	-	99	64.014	ENSMUSG00000030056	Isy1	98	71.429	Mus_musculus
ENSCSAVG00000008992	-	99	56.207	MGP_PahariEiJ_G0022357	Isy1	99	57.931	Mus_pahari
ENSCSAVG00000008992	-	99	64.014	MGP_SPRETEiJ_G0029631	Isy1	98	71.429	Mus_spretus
ENSCSAVG00000008992	-	99	54.671	ENSMPUG00000017307	-	95	55.634	Mustela_putorius_furo
ENSCSAVG00000008992	-	99	60.069	ENSMLUG00000011804	-	99	61.131	Myotis_lucifugus
ENSCSAVG00000008992	-	99	64.014	ENSNGAG00000015207	Isy1	99	65.141	Nannospalax_galili
ENSCSAVG00000008992	-	65	71.111	ENSNBRG00000006974	isy1	75	71.111	Neolamprologus_brichardi
ENSCSAVG00000008992	-	99	64.360	ENSNLEG00000028747	ISY1	99	65.493	Nomascus_leucogenys
ENSCSAVG00000008992	-	81	69.231	ENSMEUG00000008434	-	78	69.231	Notamacropus_eugenii
ENSCSAVG00000008992	-	99	62.630	ENSOPRG00000005468	-	86	63.732	Ochotona_princeps
ENSCSAVG00000008992	-	96	53.069	ENSODEG00000002067	-	95	54.610	Octodon_degus
ENSCSAVG00000008992	-	88	59.375	ENSONIG00000000267	isy1	100	59.302	Oreochromis_niloticus
ENSCSAVG00000008992	-	99	58.333	ENSOANG00000013141	-	99	58.333	Ornithorhynchus_anatinus
ENSCSAVG00000008992	-	99	64.014	ENSOCUG00000003923	-	99	65.141	Oryctolagus_cuniculus
ENSCSAVG00000008992	-	100	63.251	ENSORLG00000013250	isy1	100	63.415	Oryzias_latipes
ENSCSAVG00000008992	-	100	62.898	ENSORLG00020020966	isy1	100	63.066	Oryzias_latipes_hni
ENSCSAVG00000008992	-	100	63.066	ENSORLG00015017316	isy1	100	63.763	Oryzias_latipes_hsok
ENSCSAVG00000008992	-	99	62.153	ENSOMEG00000023905	isy1	100	64.236	Oryzias_melastigma
ENSCSAVG00000008992	-	99	63.889	ENSOGAG00000005142	-	99	65.018	Otolemur_garnettii
ENSCSAVG00000008992	-	99	62.847	ENSOARG00000003231	-	94	63.542	Ovis_aries
ENSCSAVG00000008992	-	99	64.014	ENSPPAG00000042141	-	99	65.141	Pan_paniscus
ENSCSAVG00000008992	-	99	63.322	ENSPPRG00000003480	-	99	64.437	Panthera_pardus
ENSCSAVG00000008992	-	99	63.322	ENSPTIG00000017919	-	99	64.437	Panthera_tigris_altaica
ENSCSAVG00000008992	-	99	61.765	ENSPTRG00000015367	ISY1	99	62.418	Pan_troglodytes
ENSCSAVG00000008992	-	99	64.360	ENSPANG00000004750	-	99	65.398	Papio_anubis
ENSCSAVG00000008992	-	100	62.976	ENSPKIG00000024592	isy1	100	62.976	Paramormyrops_kingsleyae
ENSCSAVG00000008992	-	100	62.411	ENSPSIG00000009384	-	100	63.066	Pelodiscus_sinensis
ENSCSAVG00000008992	-	97	57.565	ENSPMGG00000016328	isy1	88	57.565	Periophthalmus_magnuspinnatus
ENSCSAVG00000008992	-	99	63.668	ENSPEMG00000005390	Isy1	99	64.789	Peromyscus_maniculatus_bairdii
ENSCSAVG00000008992	-	64	75.419	ENSPMAG00000005010	-	99	75.419	Petromyzon_marinus
ENSCSAVG00000008992	-	100	63.475	ENSPCIG00000000466	-	74	64.111	Phascolarctos_cinereus
ENSCSAVG00000008992	-	64	59.777	ENSPFOG00000010228	isy1	100	62.360	Poecilia_formosa
ENSCSAVG00000008992	-	95	79.545	ENSPREG00000015121	isy1	100	61.091	Poecilia_reticulata
ENSCSAVG00000008992	-	99	64.360	ENSPPYG00000013424	-	99	65.493	Pongo_abelii
ENSCSAVG00000008992	-	99	58.361	ENSPCAG00000009535	-	99	59.016	Procavia_capensis
ENSCSAVG00000008992	-	71	74.603	ENSPCOG00000025242	-	99	74.603	Propithecus_coquereli
ENSCSAVG00000008992	-	100	63.103	ENSPNAG00000000703	isy1	100	64.138	Pygocentrus_nattereri
ENSCSAVG00000008992	-	99	63.860	ENSRNOG00000010021	Isy1	99	64.931	Rattus_norvegicus
ENSCSAVG00000008992	-	99	52.941	ENSRBIG00000028747	ISY1	99	53.873	Rhinopithecus_bieti
ENSCSAVG00000008992	-	99	64.360	ENSRROG00000032314	ISY1	99	65.493	Rhinopithecus_roxellana
ENSCSAVG00000008992	-	99	64.014	ENSSBOG00000029301	-	99	65.141	Saimiri_boliviensis_boliviensis
ENSCSAVG00000008992	-	100	63.475	ENSSHAG00000017192	-	100	64.111	Sarcophilus_harrisii
ENSCSAVG00000008992	-	100	62.543	ENSSFOG00015001127	isy1	100	62.543	Scleropages_formosus
ENSCSAVG00000008992	-	100	62.500	ENSSMAG00000006601	isy1	100	63.194	Scophthalmus_maximus
ENSCSAVG00000008992	-	100	63.415	ENSSDUG00000018291	isy1	100	63.763	Seriola_dumerili
ENSCSAVG00000008992	-	100	63.763	ENSSLDG00000022252	isy1	100	64.111	Seriola_lalandi_dorsalis
ENSCSAVG00000008992	-	63	52.973	ENSSARG00000007648	-	67	52.973	Sorex_araneus
ENSCSAVG00000008992	-	100	62.021	ENSSPUG00000018050	-	100	62.718	Sphenodon_punctatus
ENSCSAVG00000008992	-	65	67.760	ENSSPAG00000021900	isy1	68	67.760	Stegastes_partitus
ENSCSAVG00000008992	-	99	64.211	ENSSSCG00000038900	-	99	65.278	Sus_scrofa
ENSCSAVG00000008992	-	77	61.538	ENSTGUG00000003998	-	99	63.348	Taeniopygia_guttata
ENSCSAVG00000008992	-	71	71.066	ENSTGUG00000007076	-	93	67.907	Taeniopygia_guttata
ENSCSAVG00000008992	-	65	72.778	ENSTRUG00000002546	isy1	96	72.778	Takifugu_rubripes
ENSCSAVG00000008992	-	100	62.278	ENSTNIG00000005224	isy1	100	62.278	Tetraodon_nigroviridis
ENSCSAVG00000008992	-	58	72.650	ENSTBEG00000006938	-	100	54.955	Tupaia_belangeri
ENSCSAVG00000008992	-	99	62.633	ENSTTRG00000015267	-	99	63.701	Tursiops_truncatus
ENSCSAVG00000008992	-	99	63.322	ENSVVUG00000018261	-	99	64.437	Vulpes_vulpes
ENSCSAVG00000008992	-	100	62.898	ENSXMAG00000012452	isy1	100	65.018	Xiphophorus_maculatus