EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000008995 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2461 bases
Position: chrreftig_1942:8007-10467
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015329	MMR_HSR1	PF01926.23	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015505	-	477	-	ENSCSAVP00000015329	159 (aa)	-	H2ZCL3

Gene Model

Click here to download ENSCSAVG00000008995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000008995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000008995	-	97	41.667	ENSCSAVG00000005120	-	65	41.667
ENSCSAVG00000008995	-	95	33.117	ENSCSAVG00000005450	-	68	33.117
ENSCSAVG00000008995	-	94	38.411	ENSCSAVG00000001356	-	63	38.411
ENSCSAVG00000008995	-	95	33.548	ENSCSAVG00000009503	-	78	33.548
ENSCSAVG00000008995	-	100	37.576	ENSCSAVG00000011162	-	80	37.576
ENSCSAVG00000008995	-	95	41.447	ENSCSAVG00000000613	-	85	42.143
ENSCSAVG00000008995	-	94	51.316	ENSCSAVG00000010348	-	76	51.316
ENSCSAVG00000008995	-	97	43.312	ENSCSAVG00000000160	-	73	43.312
ENSCSAVG00000008995	-	96	41.558	ENSCSAVG00000010245	-	55	41.558
ENSCSAVG00000008995	-	95	39.216	ENSCSAVG00000009128	-	73	39.216
ENSCSAVG00000008995	-	95	40.881	ENSCSAVG00000002804	-	76	40.881
ENSCSAVG00000008995	-	100	65.000	ENSCSAVG00000009147	-	78	65.000
ENSCSAVG00000008995	-	97	43.312	ENSCSAVG00000008684	-	75	43.312
ENSCSAVG00000008995	-	97	46.154	ENSCSAVG00000002088	-	73	46.154
ENSCSAVG00000008995	-	96	39.490	ENSCSAVG00000007813	-	60	39.490
ENSCSAVG00000008995	-	94	30.263	ENSCSAVG00000006042	-	70	30.263
ENSCSAVG00000008995	-	81	30.303	ENSCSAVG00000007620	-	68	30.303
ENSCSAVG00000008995	-	96	37.821	ENSCSAVG00000005689	-	75	37.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000008995	-	98	76.282	WBGene00004284	rab-35	75	76.282	Caenorhabditis_elegans
ENSCSAVG00000008995	-	100	96.226	ENSCING00000016136	-	76	96.226	Ciona_intestinalis
ENSCSAVG00000008995	-	99	78.481	FBgn0031090	Rab35	79	78.481	Drosophila_melanogaster
ENSCSAVG00000008995	-	99	77.215	ENSSPUG00000010896	-	77	77.215	Sphenodon_punctatus
ENSCSAVG00000008995	-	99	81.013	ENSXETG00000011370	rab35	79	81.013	Xenopus_tropicalis