EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009022 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8137 bases
Position: chrreftig_17:1655622-1663758
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015365	Tudor-knot	PF11717.8	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015542	-	1845	-	ENSCSAVP00000015365	609 (aa)	-	H2ZCP9

Gene Model

Click here to download ENSCSAVG00000009022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009022's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009022	-	98	31.107	ENSG00000005302	MSL3	87	59.091	Homo_sapiens
ENSCSAVG00000009022	-	62	37.624	ENSAPOG00000022282	MSL3	60	54.955	Acanthochromis_polyacanthus
ENSCSAVG00000009022	-	94	30.118	ENSAMEG00000010145	MSL3	93	30.457	Ailuropoda_melanoleuca
ENSCSAVG00000009022	-	62	38.079	ENSACIG00000019703	MSL3	72	38.111	Amphilophus_citrinellus
ENSCSAVG00000009022	-	62	38.312	ENSAOCG00000001997	MSL3	59	53.636	Amphiprion_ocellaris
ENSCSAVG00000009022	-	62	38.636	ENSAPEG00000013147	MSL3	58	53.636	Amphiprion_percula
ENSCSAVG00000009022	-	62	37.667	ENSATEG00000002120	MSL3	70	39.016	Anabas_testudineus
ENSCSAVG00000009022	-	78	36.478	ENSAPLG00000009050	MSL3	91	36.792	Anas_platyrhynchos
ENSCSAVG00000009022	-	80	41.121	ENSACAG00000001416	MSL3	92	41.486	Anolis_carolinensis
ENSCSAVG00000009022	-	98	31.433	ENSANAG00000020352	MSL3	95	31.922	Aotus_nancymaae
ENSCSAVG00000009022	-	65	36.677	ENSACLG00000027641	MSL3	72	37.072	Astatotilapia_calliptera
ENSCSAVG00000009022	-	52	33.803	ENSACLG00000015610	-	95	32.895	Astatotilapia_calliptera
ENSCSAVG00000009022	-	65	44.337	ENSAMXG00000007892	MSL3	97	32.895	Astyanax_mexicanus
ENSCSAVG00000009022	-	98	31.107	ENSBTAG00000009278	MSL3	95	32.310	Bos_taurus
ENSCSAVG00000009022	-	98	30.794	ENSCJAG00000001061	MSL3	83	31.433	Callithrix_jacchus
ENSCSAVG00000009022	-	98	31.596	ENSCAFG00000011611	MSL3	95	31.433	Canis_familiaris
ENSCSAVG00000009022	-	98	31.596	ENSCAFG00020002360	MSL3	95	31.433	Canis_lupus_dingo
ENSCSAVG00000009022	-	98	30.945	ENSCHIG00000008619	-	95	31.433	Capra_hircus
ENSCSAVG00000009022	-	94	30.339	ENSTSYG00000012788	MSL3	93	30.288	Carlito_syrichta
ENSCSAVG00000009022	-	98	30.945	ENSCPOG00000004692	MSL3	95	31.433	Cavia_porcellus
ENSCSAVG00000009022	-	98	31.442	ENSCCAG00000035792	MSL3	95	32.085	Cebus_capucinus
ENSCSAVG00000009022	-	98	31.596	ENSCATG00000044726	MSL3	95	31.433	Cercocebus_atys
ENSCSAVG00000009022	-	98	31.596	ENSCLAG00000000102	-	95	31.922	Chinchilla_lanigera
ENSCSAVG00000009022	-	98	31.922	ENSCSAG00000015196	MSL3	95	31.759	Chlorocebus_sabaeus
ENSCSAVG00000009022	-	79	39.564	ENSCPBG00000024070	MSL3	93	39.875	Chrysemys_picta_bellii
ENSCSAVG00000009022	-	94	30.000	ENSCANG00000033891	MSL3	97	30.339	Colobus_angolensis_palliatus
ENSCSAVG00000009022	-	98	31.220	ENSCGRG00001024399	Msl3	95	31.596	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009022	-	98	31.220	ENSCGRG00000011031	Msl3	95	31.596	Cricetulus_griseus_crigri
ENSCSAVG00000009022	-	63	38.961	ENSCVAG00000012611	MSL3	75	36.741	Cyprinodon_variegatus
ENSCSAVG00000009022	-	98	31.392	ENSDORG00000003438	Msl3	95	31.605	Dipodomys_ordii
ENSCSAVG00000009022	-	74	37.752	ENSEBUG00000000515	MSL3	87	38.617	Eptatretus_burgeri
ENSCSAVG00000009022	-	67	38.125	ENSEASG00005020884	MSL3	93	37.500	Equus_asinus_asinus
ENSCSAVG00000009022	-	98	30.619	ENSECAG00000016699	MSL3	95	30.945	Equus_caballus
ENSCSAVG00000009022	-	98	30.933	ENSELUG00000021078	MSL3	96	30.632	Esox_lucius
ENSCSAVG00000009022	-	98	32.206	ENSFCAG00000002794	MSL3	95	31.596	Felis_catus
ENSCSAVG00000009022	-	60	38.272	ENSGMOG00000015932	MSL3	67	38.272	Gadus_morhua
ENSCSAVG00000009022	-	78	39.062	ENSGALG00000041433	MSL3	93	40.625	Gallus_gallus
ENSCSAVG00000009022	-	63	39.506	ENSGACG00000015038	MSL3	70	39.506	Gasterosteus_aculeatus
ENSCSAVG00000009022	-	79	38.629	ENSGAGG00000021072	MSL3	96	40.187	Gopherus_agassizii
ENSCSAVG00000009022	-	98	31.107	ENSGGOG00000006582	MSL3	95	31.596	Gorilla_gorilla
ENSCSAVG00000009022	-	59	32.895	ENSHBUG00000015664	-	95	32.895	Haplochromis_burtoni
ENSCSAVG00000009022	-	65	36.364	ENSHBUG00000008665	MSL3	72	38.226	Haplochromis_burtoni
ENSCSAVG00000009022	-	98	31.759	ENSHGLG00000000202	MSL3	95	31.433	Heterocephalus_glaber_female
ENSCSAVG00000009022	-	62	38.835	ENSHCOG00000013930	MSL3	57	61.446	Hippocampus_comes
ENSCSAVG00000009022	-	98	32.149	ENSIPUG00000012531	msl3	96	31.935	Ictalurus_punctatus
ENSCSAVG00000009022	-	98	31.759	ENSSTOG00000006229	MSL3	95	31.596	Ictidomys_tridecemlineatus
ENSCSAVG00000009022	-	98	31.494	ENSJJAG00000007793	-	95	32.033	Jaculus_jaculus
ENSCSAVG00000009022	-	73	39.938	ENSLOCG00000009931	MSL3	84	40.248	Lepisosteus_oculatus
ENSCSAVG00000009022	-	98	31.596	ENSMFAG00000031868	MSL3	95	31.433	Macaca_fascicularis
ENSCSAVG00000009022	-	98	31.596	ENSMMUG00000002689	MSL3	95	31.433	Macaca_mulatta
ENSCSAVG00000009022	-	98	31.596	ENSMNEG00000045099	MSL3	95	31.433	Macaca_nemestrina
ENSCSAVG00000009022	-	62	38.158	ENSMAMG00000004151	MSL3	68	38.487	Mastacembelus_armatus
ENSCSAVG00000009022	-	62	39.145	ENSMZEG00005004848	MSL3	68	40.397	Maylandia_zebra
ENSCSAVG00000009022	-	59	32.895	ENSMZEG00005012470	-	95	32.895	Maylandia_zebra
ENSCSAVG00000009022	-	78	39.062	ENSMGAG00000014710	MSL3	92	40.625	Meleagris_gallopavo
ENSCSAVG00000009022	-	98	31.006	ENSMAUG00000013952	Msl3	95	31.759	Mesocricetus_auratus
ENSCSAVG00000009022	-	98	31.270	ENSMICG00000014399	MSL3	95	31.280	Microcebus_murinus
ENSCSAVG00000009022	-	98	32.033	ENSMOCG00000000342	Msl3	95	32.085	Microtus_ochrogaster
ENSCSAVG00000009022	-	62	37.171	ENSMMOG00000007050	MSL3	68	37.500	Mola_mola
ENSCSAVG00000009022	-	70	39.414	ENSMODG00000017350	MSL3	93	39.688	Monodelphis_domestica
ENSCSAVG00000009022	-	61	38.824	ENSMALG00000010272	MSL3	74	38.824	Monopterus_albus
ENSCSAVG00000009022	-	98	30.682	MGP_CAROLIEiJ_G0033581	Msl3	95	30.945	Mus_caroli
ENSCSAVG00000009022	-	98	30.682	ENSMUSG00000031358	Msl3	95	30.945	Mus_musculus
ENSCSAVG00000009022	-	98	30.357	MGP_PahariEiJ_G0032120	Msl3	95	30.782	Mus_pahari
ENSCSAVG00000009022	-	98	30.682	MGP_SPRETEiJ_G0034750	Msl3	95	30.945	Mus_spretus
ENSCSAVG00000009022	-	98	30.945	ENSMPUG00000002545	MSL3	95	31.759	Mustela_putorius_furo
ENSCSAVG00000009022	-	95	31.631	ENSMLUG00000003852	MSL3	98	31.614	Myotis_lucifugus
ENSCSAVG00000009022	-	98	32.633	ENSNGAG00000005152	-	95	31.826	Nannospalax_galili
ENSCSAVG00000009022	-	65	36.364	ENSNBRG00000013071	MSL3	73	37.309	Neolamprologus_brichardi
ENSCSAVG00000009022	-	59	32.895	ENSNBRG00000021781	-	95	32.895	Neolamprologus_brichardi
ENSCSAVG00000009022	-	98	31.107	ENSNLEG00000009057	MSL3	95	31.107	Nomascus_leucogenys
ENSCSAVG00000009022	-	98	31.107	ENSODEG00000005888	-	95	31.759	Octodon_degus
ENSCSAVG00000009022	-	59	32.895	ENSONIG00000013241	-	95	32.895	Oreochromis_niloticus
ENSCSAVG00000009022	-	62	38.816	ENSONIG00000012104	MSL3	69	40.397	Oreochromis_niloticus
ENSCSAVG00000009022	-	62	37.874	ENSORLG00020018280	MSL3	72	39.672	Oryzias_latipes_hni
ENSCSAVG00000009022	-	62	39.474	ENSOMEG00000005256	MSL3	68	39.474	Oryzias_melastigma
ENSCSAVG00000009022	-	98	30.782	ENSOGAG00000005030	MSL3	95	31.118	Otolemur_garnettii
ENSCSAVG00000009022	-	98	31.097	ENSPPAG00000039607	MSL3	95	30.984	Pan_paniscus
ENSCSAVG00000009022	-	98	31.759	ENSPPRG00000024561	MSL3	96	31.707	Panthera_pardus
ENSCSAVG00000009022	-	76	36.027	ENSPTIG00000017508	MSL3	88	35.570	Panthera_tigris_altaica
ENSCSAVG00000009022	-	98	31.107	ENSPTRG00000021662	MSL3	97	31.271	Pan_troglodytes
ENSCSAVG00000009022	-	82	39.233	ENSPKIG00000011664	MSL3	95	39.412	Paramormyrops_kingsleyae
ENSCSAVG00000009022	-	66	36.000	ENSPSIG00000007595	MSL3	94	37.584	Pelodiscus_sinensis
ENSCSAVG00000009022	-	67	36.842	ENSPMGG00000015421	MSL3	70	56.075	Periophthalmus_magnuspinnatus
ENSCSAVG00000009022	-	98	30.682	ENSPEMG00000011959	Msl3	95	30.945	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009022	-	70	38.750	ENSPCIG00000005877	-	60	39.688	Phascolarctos_cinereus
ENSCSAVG00000009022	-	63	39.610	ENSPFOG00000016323	MSL3	69	38.782	Poecilia_formosa
ENSCSAVG00000009022	-	63	39.610	ENSPLAG00000016544	MSL3	70	38.127	Poecilia_latipinna
ENSCSAVG00000009022	-	63	39.610	ENSPMEG00000007675	MSL3	70	37.793	Poecilia_mexicana
ENSCSAVG00000009022	-	63	39.677	ENSPREG00000009008	MSL3	69	38.636	Poecilia_reticulata
ENSCSAVG00000009022	-	98	31.107	ENSPPYG00000020123	MSL3	95	31.107	Pongo_abelii
ENSCSAVG00000009022	-	50	38.365	ENSPCAG00000005332	MSL3	64	39.308	Procavia_capensis
ENSCSAVG00000009022	-	98	30.945	ENSPCOG00000010079	-	95	31.118	Propithecus_coquereli
ENSCSAVG00000009022	-	62	38.816	ENSPNYG00000021904	MSL3	68	40.066	Pundamilia_nyererei
ENSCSAVG00000009022	-	98	32.524	ENSPNAG00000016028	MSL3	96	32.528	Pygocentrus_nattereri
ENSCSAVG00000009022	-	98	31.057	ENSRROG00000032523	MSL3	95	31.057	Rhinopithecus_roxellana
ENSCSAVG00000009022	-	98	31.280	ENSSBOG00000007759	MSL3	95	31.922	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009022	-	70	35.831	ENSSHAG00000013243	MSL3	76	36.808	Sarcophilus_harrisii
ENSCSAVG00000009022	-	59	42.647	ENSSFOG00015004855	MSL3	64	42.647	Scleropages_formosus
ENSCSAVG00000009022	-	81	38.390	ENSSFOG00015003008	msl3	95	38.532	Scleropages_formosus
ENSCSAVG00000009022	-	62	38.312	ENSSMAG00000003592	MSL3	68	38.961	Scophthalmus_maximus
ENSCSAVG00000009022	-	65	36.559	ENSSLDG00000012737	MSL3	63	54.717	Seriola_lalandi_dorsalis
ENSCSAVG00000009022	-	50	38.318	ENSSPUG00000003224	-	75	40.000	Sphenodon_punctatus
ENSCSAVG00000009022	-	62	38.509	ENSSPAG00000007335	MSL3	69	40.000	Stegastes_partitus
ENSCSAVG00000009022	-	98	31.107	ENSSSCG00000012114	MSL3	95	31.433	Sus_scrofa
ENSCSAVG00000009022	-	66	37.793	ENSTGUG00000008286	MSL3	97	30.964	Taeniopygia_guttata
ENSCSAVG00000009022	-	62	38.762	ENSTRUG00000012620	MSL3	68	39.414	Takifugu_rubripes
ENSCSAVG00000009022	-	62	39.088	ENSTNIG00000014548	MSL3	69	37.540	Tetraodon_nigroviridis
ENSCSAVG00000009022	-	53	37.069	ENSTBEG00000013679	MSL3	62	37.069	Tupaia_belangeri
ENSCSAVG00000009022	-	75	35.357	ENSTTRG00000008682	MSL3	79	34.286	Tursiops_truncatus
ENSCSAVG00000009022	-	63	37.374	ENSXCOG00000017534	MSL3	70	37.162	Xiphophorus_couchianus
ENSCSAVG00000009022	-	63	39.610	ENSXMAG00000009066	MSL3	69	38.562	Xiphophorus_maculatus