EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000009039 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
9564 bases
Position
chrreftig_48:858431-867994
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000015404cwf21PF08312.121.5e-1011
ENSCSAVP00000015405cwf21PF08312.128.4e-1011
ENSCSAVP00000015403cwf21PF08312.121e-0911
ENSCSAVP00000015405RRM_1PF00076.227.8e-1411
ENSCSAVP00000015404RRM_1PF00076.228.3e-1411
ENSCSAVP00000015403RRM_1PF00076.229.8e-1411
ENSCSAVP00000015403SurpPF01805.202.6e-1911
ENSCSAVP00000015405SurpPF01805.202.8e-1911
ENSCSAVP00000015404SurpPF01805.202.9e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000015582-2220-ENSCSAVP00000015405740 (aa)-H2ZCT9
ENSCSAVT00000015581-2387-ENSCSAVP00000015404793 (aa)-H2ZCT8
ENSCSAVT00000015580-2710-ENSCSAVP00000015403868 (aa)-H2ZCT7
Gene Model
Click here to download ENSCSAVG00000009039's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009039's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000009039-9751.422ENSG00000163714U2SURP8452.198Homo_sapiens
ENSCSAVG00000009039-9746.401ENSAPOG00000005569zgc:1630989544.369Acanthochromis_polyacanthus
ENSCSAVG00000009039-9951.263ENSAPOG00000011345u2surp8452.169Acanthochromis_polyacanthus
ENSCSAVG00000009039-9751.422ENSAMEG00000012757U2SURP8052.638Ailuropoda_melanoleuca
ENSCSAVG00000009039-9742.876ENSACIG00000011968zgc:1630989543.788Amphilophus_citrinellus
ENSCSAVG00000009039-9950.877ENSACIG00000018537u2surp9250.915Amphilophus_citrinellus
ENSCSAVG00000009039-9746.401ENSAOCG00000008482zgc:1630989644.121Amphiprion_ocellaris
ENSCSAVG00000009039-9950.622ENSAOCG00000003589u2surp8751.276Amphiprion_ocellaris
ENSCSAVG00000009039-9746.401ENSAPEG00000001348zgc:1630989644.121Amphiprion_percula
ENSCSAVG00000009039-9951.010ENSAPEG00000016652u2surp9150.056Amphiprion_percula
ENSCSAVG00000009039-9951.375ENSATEG00000006321u2surp9051.098Anabas_testudineus
ENSCSAVG00000009039-9746.245ENSATEG00000016576zgc:1630988746.623Anabas_testudineus
ENSCSAVG00000009039-9751.272ENSAPLG00000002348U2SURP8950.450Anas_platyrhynchos
ENSCSAVG00000009039-9750.895ENSACAG00000009512U2SURP8052.042Anolis_carolinensis
ENSCSAVG00000009039-9851.371ENSANAG00000035774U2SURP8952.036Aotus_nancymaae
ENSCSAVG00000009039-9747.545ENSACLG00000016647zgc:1630988845.798Astatotilapia_calliptera
ENSCSAVG00000009039-9951.436ENSACLG00000027507u2surp8850.624Astatotilapia_calliptera
ENSCSAVG00000009039-9745.119ENSAMXG00000005081zgc:1630989045.018Astyanax_mexicanus
ENSCSAVG00000009039-10050.310ENSAMXG00000006189u2surp8752.251Astyanax_mexicanus
ENSCSAVG00000009039-9235.321WBGene00015581C07H6.49230.559Caenorhabditis_elegans
ENSCSAVG00000009039-9751.483ENSCJAG00000001639U2SURP8552.700Callithrix_jacchus
ENSCSAVG00000009039-9751.483ENSCAFG00000007973U2SURP8452.311Canis_familiaris
ENSCSAVG00000009039-9751.422ENSCAFG00020010497U2SURP9150.188Canis_lupus_dingo
ENSCSAVG00000009039-9751.483ENSCHIG00000023892U2SURP8152.169Capra_hircus
ENSCSAVG00000009039-9950.930ENSTSYG00000008889U2SURP8452.638Carlito_syrichta
ENSCSAVG00000009039-8451.589ENSCAPG00000016009U2SURP7851.926Cavia_aperea
ENSCSAVG00000009039-8451.613ENSCPOG00000011656U2SURP7953.221Cavia_porcellus
ENSCSAVG00000009039-9752.045ENSCCAG00000032530U2SURP8452.467Cebus_capucinus
ENSCSAVG00000009039-9851.237ENSCATG00000039024U2SURP8552.638Cercocebus_atys
ENSCSAVG00000009039-9640.806ENSCLAG00000011055-8341.919Chinchilla_lanigera
ENSCSAVG00000009039-9851.237ENSCLAG00000001331-8452.638Chinchilla_lanigera
ENSCSAVG00000009039-9751.483ENSCSAG00000011321U2SURP8452.311Chlorocebus_sabaeus
ENSCSAVG00000009039-7556.219ENSCHOG00000001300U2SURP5856.219Choloepus_hoffmanni
ENSCSAVG00000009039-9949.652ENSCPBG00000008969U2SURP9051.748Chrysemys_picta_bellii
ENSCSAVG00000009039-9977.503ENSCING00000018030-9377.053Ciona_intestinalis
ENSCSAVG00000009039-9751.422ENSCANG00000032307U2SURP8552.638Colobus_angolensis_palliatus
ENSCSAVG00000009039-9851.237ENSCGRG00001019402U2surp8852.252Cricetulus_griseus_chok1gshd
ENSCSAVG00000009039-9849.688ENSCGRG00000014315U2surp8150.000Cricetulus_griseus_crigri
ENSCSAVG00000009039-9746.615ENSCSEG00000020119zgc:1630989245.029Cynoglossus_semilaevis
ENSCSAVG00000009039-9952.720ENSCSEG00000015150u2surp9351.030Cynoglossus_semilaevis
ENSCSAVG00000009039-9745.703ENSCVAG00000012334zgc:1630988845.477Cyprinodon_variegatus
ENSCSAVG00000009039-9951.965ENSCVAG00000002961u2surp9051.034Cyprinodon_variegatus
ENSCSAVG00000009039-9950.616ENSDARG00000061490u2surp9849.492Danio_rerio
ENSCSAVG00000009039-9748.413ENSDARG00000078911zgc:1630988651.672Danio_rerio
ENSCSAVG00000009039-9751.182ENSDNOG00000006427U2SURP8052.398Dasypus_novemcinctus
ENSCSAVG00000009039-10044.895FBgn0034572CG93468545.146Drosophila_melanogaster
ENSCSAVG00000009039-6866.000ENSETEG00000000149U2SURP5466.667Echinops_telfairi
ENSCSAVG00000009039-6668.000ENSEBUG00000003543u2surp8144.934Eptatretus_burgeri
ENSCSAVG00000009039-9751.422ENSEASG00005000213U2SURP8552.638Equus_asinus_asinus
ENSCSAVG00000009039-9752.035ENSECAG00000022460U2SURP8552.638Equus_caballus
ENSCSAVG00000009039-8949.189ENSEEUG00000013553U2SURP6255.889Erinaceus_europaeus
ENSCSAVG00000009039-10048.724ENSELUG00000017966zgc:1630988748.000Esox_lucius
ENSCSAVG00000009039-9848.220ENSELUG00000002150u2surp8548.936Esox_lucius
ENSCSAVG00000009039-9751.483ENSFCAG00000012186U2SURP8452.311Felis_catus
ENSCSAVG00000009039-9949.828ENSFALG00000007070U2SURP8749.722Ficedula_albicollis
ENSCSAVG00000009039-9851.237ENSFDAG00000013365U2SURP8452.638Fukomys_damarensis
ENSCSAVG00000009039-9951.198ENSFHEG00000016966u2surp8850.960Fundulus_heteroclitus
ENSCSAVG00000009039-9745.855ENSFHEG00000014263zgc:1630988745.332Fundulus_heteroclitus
ENSCSAVG00000009039-8846.875ENSGMOG00000000935zgc:1630989047.379Gadus_morhua
ENSCSAVG00000009039-10049.254ENSGMOG00000002641u2surp8749.592Gadus_morhua
ENSCSAVG00000009039-9950.693ENSGALG00000002612U2SURP8251.400Gallus_gallus
ENSCSAVG00000009039-10050.373ENSGAFG00000004001u2surp9451.445Gambusia_affinis
ENSCSAVG00000009039-9943.410ENSGACG00000020709zgc:1630988344.252Gasterosteus_aculeatus
ENSCSAVG00000009039-10049.277ENSGACG00000003763u2surp8650.930Gasterosteus_aculeatus
ENSCSAVG00000009039-9750.444ENSGAGG00000010747U2SURP9051.078Gopherus_agassizii
ENSCSAVG00000009039-9949.428ENSGGOG00000005563U2SURP8650.920Gorilla_gorilla
ENSCSAVG00000009039-8355.238ENSHBUG00000015530u2surp8354.762Haplochromis_burtoni
ENSCSAVG00000009039-9747.545ENSHBUG00000022716zgc:1630989245.798Haplochromis_burtoni
ENSCSAVG00000009039-9940.442ENSHGLG00000018851-7941.667Heterocephalus_glaber_female
ENSCSAVG00000009039-9851.237ENSHGLG00000017227-8452.638Heterocephalus_glaber_female
ENSCSAVG00000009039-9939.783ENSHGLG00100001176-7941.429Heterocephalus_glaber_male
ENSCSAVG00000009039-9851.237ENSHGLG00100005796-8452.638Heterocephalus_glaber_male
ENSCSAVG00000009039-9940.442ENSHGLG00100001134-7941.667Heterocephalus_glaber_male
ENSCSAVG00000009039-10050.702ENSHCOG00000011508u2surp8548.902Hippocampus_comes
ENSCSAVG00000009039-9748.037ENSIPUG00000019652zgc:1630989046.966Ictalurus_punctatus
ENSCSAVG00000009039-10051.061ENSIPUG00000007822u2surp8551.469Ictalurus_punctatus
ENSCSAVG00000009039-9751.483ENSSTOG00000015997U2SURP8452.198Ictidomys_tridecemlineatus
ENSCSAVG00000009039-9751.540ENSJJAG00000021595U2surp8851.802Jaculus_jaculus
ENSCSAVG00000009039-9950.499ENSKMAG00000012083u2surp9749.672Kryptolebias_marmoratus
ENSCSAVG00000009039-9946.976ENSKMAG00000009727zgc:1630988746.840Kryptolebias_marmoratus
ENSCSAVG00000009039-9742.388ENSLBEG00000002498zgc:1630988647.463Labrus_bergylta
ENSCSAVG00000009039-10051.201ENSLBEG00000026284u2surp9351.720Labrus_bergylta
ENSCSAVG00000009039-9750.575ENSLACG00000012318U2SURP9150.799Latimeria_chalumnae
ENSCSAVG00000009039-9750.765ENSLACG00000008434zgc:1630988450.976Latimeria_chalumnae
ENSCSAVG00000009039-9743.392ENSLOCG00000013596zgc:1630988349.378Lepisosteus_oculatus
ENSCSAVG00000009039-9851.106ENSLOCG00000007828u2surp8951.066Lepisosteus_oculatus
ENSCSAVG00000009039-9751.358ENSLAFG00000002566U2SURP8452.140Loxodonta_africana
ENSCSAVG00000009039-9951.109ENSMFAG00000031084U2SURP8652.638Macaca_fascicularis
ENSCSAVG00000009039-9751.422ENSMMUG00000002775U2SURP8852.252Macaca_mulatta
ENSCSAVG00000009039-9951.109ENSMNEG00000034553U2SURP8652.638Macaca_nemestrina
ENSCSAVG00000009039-9951.109ENSMLEG00000021031U2SURP8652.638Mandrillus_leucophaeus
ENSCSAVG00000009039-9950.690ENSMAMG00000003004u2surp8551.358Mastacembelus_armatus
ENSCSAVG00000009039-9747.507ENSMAMG00000016977zgc:1630988846.742Mastacembelus_armatus
ENSCSAVG00000009039-9747.545ENSMZEG00005016805zgc:1630988845.798Maylandia_zebra
ENSCSAVG00000009039-9952.212ENSMZEG00005021991u2surp8452.295Maylandia_zebra
ENSCSAVG00000009039-9751.276ENSMGAG00000006549U2SURP9050.563Meleagris_gallopavo
ENSCSAVG00000009039-9751.483ENSMICG00000049294U2SURP8352.311Microcebus_murinus
ENSCSAVG00000009039-9851.237ENSMOCG00000000631U2surp8452.638Microtus_ochrogaster
ENSCSAVG00000009039-9950.187ENSMMOG00000004474u2surp8750.602Mola_mola
ENSCSAVG00000009039-9742.533ENSMMOG00000016677zgc:1630988739.975Mola_mola
ENSCSAVG00000009039-9751.001ENSMODG00000021242-8449.344Monodelphis_domestica
ENSCSAVG00000009039-9950.363ENSMODG00000010847-8450.850Monodelphis_domestica
ENSCSAVG00000009039-10051.111ENSMALG00000007458u2surp9352.189Monopterus_albus
ENSCSAVG00000009039-9747.742ENSMALG00000015881zgc:1630989644.507Monopterus_albus
ENSCSAVG00000009039-9656.034MGP_CAROLIEiJ_G0032530-8150.543Mus_caroli
ENSCSAVG00000009039-9851.355ENSMUSG00000032407U2surp8452.638Mus_musculus
ENSCSAVG00000009039-9851.237MGP_PahariEiJ_G0015398U2surp8452.638Mus_pahari
ENSCSAVG00000009039-9851.237MGP_SPRETEiJ_G0033672U2surp8452.638Mus_spretus
ENSCSAVG00000009039-9751.422ENSMPUG00000011855U2SURP8052.638Mustela_putorius_furo
ENSCSAVG00000009039-9850.584ENSMLUG00000002920-8252.225Myotis_lucifugus
ENSCSAVG00000009039-9850.881ENSMLUG00000014633-8051.228Myotis_lucifugus
ENSCSAVG00000009039-9851.237ENSNGAG00000013707U2surp8452.638Nannospalax_galili
ENSCSAVG00000009039-9846.837ENSNBRG00000017162u2surp9746.249Neolamprologus_brichardi
ENSCSAVG00000009039-9747.130ENSNBRG00000021199zgc:1630988845.432Neolamprologus_brichardi
ENSCSAVG00000009039-9851.237ENSNLEG00000004915U2SURP8552.638Nomascus_leucogenys
ENSCSAVG00000009039-8448.571ENSMEUG00000000127U2SURP6850.276Notamacropus_eugenii
ENSCSAVG00000009039-8943.902ENSOPRG00000011328U2SURP7244.429Ochotona_princeps
ENSCSAVG00000009039-9851.355ENSODEG00000008767U2SURP8452.638Octodon_degus
ENSCSAVG00000009039-9950.683ENSONIG00000005909u2surp8850.338Oreochromis_niloticus
ENSCSAVG00000009039-9747.247ENSONIG00000005263zgc:1630988847.052Oreochromis_niloticus
ENSCSAVG00000009039-9850.760ENSOANG00000003644U2SURP7952.563Ornithorhynchus_anatinus
ENSCSAVG00000009039-9850.877ENSOCUG00000012121U2SURP8052.638Oryctolagus_cuniculus
ENSCSAVG00000009039-9746.736ENSORLG00000007141zgc:1630988945.711Oryzias_latipes
ENSCSAVG00000009039-9950.374ENSORLG00000010235u2surp8452.781Oryzias_latipes
ENSCSAVG00000009039-9950.246ENSORLG00020011726u2surp9453.140Oryzias_latipes_hni
ENSCSAVG00000009039-9746.883ENSORLG00020005525zgc:1630988945.711Oryzias_latipes_hni
ENSCSAVG00000009039-9950.438ENSORLG00015011465u2surp8452.061Oryzias_latipes_hsok
ENSCSAVG00000009039-9746.867ENSORLG00015010776zgc:1630988945.711Oryzias_latipes_hsok
ENSCSAVG00000009039-9746.745ENSOMEG00000002172zgc:1630988945.879Oryzias_melastigma
ENSCSAVG00000009039-9950.562ENSOMEG00000004962u2surp9852.493Oryzias_melastigma
ENSCSAVG00000009039-9751.422ENSOGAG00000004335U2SURP8152.638Otolemur_garnettii
ENSCSAVG00000009039-9651.551ENSOARG00000005871U2SURP8052.817Ovis_aries
ENSCSAVG00000009039-9751.422ENSPPRG00000022258U2SURP8052.638Panthera_pardus
ENSCSAVG00000009039-9751.303ENSPTIG00000001167U2SURP8052.521Panthera_tigris_altaica
ENSCSAVG00000009039-9751.422ENSPTRG00000015489U2SURP8452.252Pan_troglodytes
ENSCSAVG00000009039-9851.237ENSPANG00000000710U2SURP8653.181Papio_anubis
ENSCSAVG00000009039-9849.337ENSPKIG00000017920zgc:1630988549.318Paramormyrops_kingsleyae
ENSCSAVG00000009039-9950.063ENSPKIG00000021859u2surp8650.877Paramormyrops_kingsleyae
ENSCSAVG00000009039-9750.690ENSPSIG00000016578U2SURP8651.179Pelodiscus_sinensis
ENSCSAVG00000009039-9846.102ENSPMGG00000008623zgc:1630989859.281Periophthalmus_magnuspinnatus
ENSCSAVG00000009039-9851.237ENSPEMG00000020825U2surp8852.027Peromyscus_maniculatus_bairdii
ENSCSAVG00000009039-9750.060ENSPCIG00000004246U2SURP9049.376Phascolarctos_cinereus
ENSCSAVG00000009039-9951.059ENSPFOG00000014489u2surp8850.567Poecilia_formosa
ENSCSAVG00000009039-9745.876ENSPFOG00000011956zgc:1630988845.432Poecilia_formosa
ENSCSAVG00000009039-9745.876ENSPLAG00000008250zgc:1630988845.432Poecilia_latipinna
ENSCSAVG00000009039-9951.707ENSPLAG00000006816u2surp8850.567Poecilia_latipinna
ENSCSAVG00000009039-9951.884ENSPMEG00000014599u2surp9052.364Poecilia_mexicana
ENSCSAVG00000009039-9745.946ENSPMEG00000017413zgc:1630988845.620Poecilia_mexicana
ENSCSAVG00000009039-9746.693ENSPREG00000023067zgc:1630988745.823Poecilia_reticulata
ENSCSAVG00000009039-10051.633ENSPREG00000009325u2surp9351.422Poecilia_reticulata
ENSCSAVG00000009039-9751.425ENSPPYG00000014178U2SURP8452.257Pongo_abelii
ENSCSAVG00000009039-9749.231ENSPCAG00000015251U2SURP8050.600Procavia_capensis
ENSCSAVG00000009039-9849.652ENSPCOG00000019599U2SURP8750.440Propithecus_coquereli
ENSCSAVG00000009039-9748.815ENSPVAG00000016077U2SURP8049.824Pteropus_vampyrus
ENSCSAVG00000009039-9747.545ENSPNYG00000016481zgc:1630988845.920Pundamilia_nyererei
ENSCSAVG00000009039-10050.649ENSPNYG00000006246u2surp8450.611Pundamilia_nyererei
ENSCSAVG00000009039-10050.877ENSPNAG00000001722u2surp9552.056Pygocentrus_nattereri
ENSCSAVG00000009039-9748.163ENSPNAG00000023885zgc:1630988946.879Pygocentrus_nattereri
ENSCSAVG00000009039-9851.237ENSRNOG00000008607U2surp8852.252Rattus_norvegicus
ENSCSAVG00000009039-9750.383ENSRBIG00000041099U2SURP8051.583Rhinopithecus_bieti
ENSCSAVG00000009039-9950.992ENSRROG00000043548U2SURP8652.638Rhinopithecus_roxellana
ENSCSAVG00000009039-9751.422ENSSBOG00000027984U2SURP8548.423Saimiri_boliviensis_boliviensis
ENSCSAVG00000009039-9751.540ENSSHAG00000014407U2SURP8452.130Sarcophilus_harrisii
ENSCSAVG00000009039-9749.221ENSSFOG00015004962zgc:1630988548.712Scleropages_formosus
ENSCSAVG00000009039-9952.075ENSSFOG00015010470u2surp8751.471Scleropages_formosus
ENSCSAVG00000009039-9951.080ENSSMAG00000012475u2surp8850.285Scophthalmus_maximus
ENSCSAVG00000009039-9747.837ENSSMAG00000013442zgc:1630988846.287Scophthalmus_maximus
ENSCSAVG00000009039-9747.632ENSSDUG00000009881zgc:1630989645.096Seriola_dumerili
ENSCSAVG00000009039-9951.621ENSSDUG00000006136u2surp8750.969Seriola_dumerili
ENSCSAVG00000009039-9746.871ENSSLDG00000020364zgc:1630989644.983Seriola_lalandi_dorsalis
ENSCSAVG00000009039-9951.633ENSSLDG00000022385u2surp8850.738Seriola_lalandi_dorsalis
ENSCSAVG00000009039-8555.172ENSSARG00000013779U2SURP7055.502Sorex_araneus
ENSCSAVG00000009039-9751.938ENSSPUG00000013871U2SURP9050.736Sphenodon_punctatus
ENSCSAVG00000009039-9746.075ENSSPAG00000000916zgc:1630988946.285Stegastes_partitus
ENSCSAVG00000009039-9951.136ENSSPAG00000020432u2surp9250.792Stegastes_partitus
ENSCSAVG00000009039-9751.422ENSSSCG00000011684U2SURP8552.638Sus_scrofa
ENSCSAVG00000009039-9751.148ENSTGUG00000008687U2SURP9050.338Taeniopygia_guttata
ENSCSAVG00000009039-10049.626ENSTRUG00000017810u2surp9051.018Takifugu_rubripes
ENSCSAVG00000009039-10050.983ENSTNIG00000012767u2surp8752.695Tetraodon_nigroviridis
ENSCSAVG00000009039-8950.609ENSTBEG00000016313U2SURP8047.816Tupaia_belangeri
ENSCSAVG00000009039-9751.367ENSTTRG00000017170U2SURP8052.588Tursiops_truncatus
ENSCSAVG00000009039-9751.422ENSUAMG00000028259U2SURP8852.638Ursus_americanus
ENSCSAVG00000009039-9751.422ENSVPAG00000004697U2SURP8152.521Vicugna_pacos
ENSCSAVG00000009039-9751.422ENSVVUG00000021495U2SURP8552.638Vulpes_vulpes
ENSCSAVG00000009039-9951.000ENSXETG00000022133u2surp8951.348Xenopus_tropicalis
ENSCSAVG00000009039-10050.246ENSXCOG00000011427u2surp9251.114Xiphophorus_couchianus
ENSCSAVG00000009039-7846.244ENSXCOG00000007025zgc:1630988643.109Xiphophorus_couchianus
ENSCSAVG00000009039-9745.876ENSXMAG00000012662zgc:1630988845.554Xiphophorus_maculatus
ENSCSAVG00000009039-9951.702ENSXMAG00000002608u2surp9052.991Xiphophorus_maculatus

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