EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009049 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7471 bases
Position: chrreftig_76:2824759-2832229
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015425	HRDC	PF00570.23	3.6e-12	1	1
ENSCSAVP00000015425	PMC2NT	PF08066.12	8.4e-16	1	1
ENSCSAVP00000015425	DNA_pol_A_exo1	PF01612.20	2.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015603	-	1844	-	ENSCSAVP00000015425	586 (aa)	-	H2ZCV9

Gene Model

Click here to download ENSCSAVG00000009049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009049	-	100	47.563	ENSG00000171824	EXOSC10	68	47.563	Homo_sapiens
ENSCSAVG00000009049	-	100	48.074	ENSAPOG00000013304	exosc10	67	49.644	Acanthochromis_polyacanthus
ENSCSAVG00000009049	-	100	47.315	ENSAMEG00000009546	EXOSC10	66	47.315	Ailuropoda_melanoleuca
ENSCSAVG00000009049	-	94	48.399	ENSACIG00000020455	exosc10	66	48.399	Amphilophus_citrinellus
ENSCSAVG00000009049	-	94	49.466	ENSAOCG00000018823	exosc10	66	49.466	Amphiprion_ocellaris
ENSCSAVG00000009049	-	100	48.074	ENSAPEG00000017786	exosc10	67	49.466	Amphiprion_percula
ENSCSAVG00000009049	-	100	48.409	ENSATEG00000017271	exosc10	65	48.409	Anabas_testudineus
ENSCSAVG00000009049	-	99	48.054	ENSAPLG00000006652	EXOSC10	66	48.054	Anas_platyrhynchos
ENSCSAVG00000009049	-	54	50.473	ENSACAG00000002545	-	93	50.473	Anolis_carolinensis
ENSCSAVG00000009049	-	91	48.524	ENSANAG00000031112	EXOSC10	65	48.524	Aotus_nancymaae
ENSCSAVG00000009049	-	97	48.718	ENSACLG00000025226	exosc10	66	48.877	Astatotilapia_calliptera
ENSCSAVG00000009049	-	100	48.235	ENSAMXG00000014510	exosc10	64	48.235	Astyanax_mexicanus
ENSCSAVG00000009049	-	100	47.315	ENSBTAG00000002590	EXOSC10	83	47.315	Bos_taurus
ENSCSAVG00000009049	-	93	35.357	WBGene00000796	crn-3	61	35.357	Caenorhabditis_elegans
ENSCSAVG00000009049	-	100	47.227	ENSCJAG00000002327	EXOSC10	68	47.227	Callithrix_jacchus
ENSCSAVG00000009049	-	100	47.148	ENSCAFG00000016721	EXOSC10	64	47.148	Canis_familiaris
ENSCSAVG00000009049	-	100	47.148	ENSCAFG00020002481	EXOSC10	64	47.148	Canis_lupus_dingo
ENSCSAVG00000009049	-	100	47.148	ENSCHIG00000020022	EXOSC10	69	47.148	Capra_hircus
ENSCSAVG00000009049	-	96	46.341	ENSTSYG00000006937	EXOSC10	67	46.341	Carlito_syrichta
ENSCSAVG00000009049	-	99	48.041	ENSCAPG00000006494	EXOSC10	70	48.041	Cavia_aperea
ENSCSAVG00000009049	-	100	47.731	ENSCPOG00000011628	EXOSC10	68	47.731	Cavia_porcellus
ENSCSAVG00000009049	-	91	48.339	ENSCCAG00000023223	EXOSC10	66	48.524	Cebus_capucinus
ENSCSAVG00000009049	-	100	47.731	ENSCATG00000039000	EXOSC10	87	47.395	Cercocebus_atys
ENSCSAVG00000009049	-	100	47.395	ENSCLAG00000005283	EXOSC10	68	47.395	Chinchilla_lanigera
ENSCSAVG00000009049	-	100	47.731	ENSCSAG00000000788	EXOSC10	66	47.731	Chlorocebus_sabaeus
ENSCSAVG00000009049	-	100	47.148	ENSCHOG00000012713	EXOSC10	67	47.148	Choloepus_hoffmanni
ENSCSAVG00000009049	-	100	46.141	ENSCPBG00000022004	EXOSC10	65	46.141	Chrysemys_picta_bellii
ENSCSAVG00000009049	-	100	47.563	ENSCANG00000042813	EXOSC10	68	47.563	Colobus_angolensis_palliatus
ENSCSAVG00000009049	-	100	47.315	ENSCGRG00001018469	Exosc10	68	47.315	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009049	-	99	47.619	ENSCGRG00000002278	Exosc10	67	47.619	Cricetulus_griseus_crigri
ENSCSAVG00000009049	-	94	50.000	ENSCSEG00000005346	exosc10	61	50.000	Cynoglossus_semilaevis
ENSCSAVG00000009049	-	94	49.821	ENSCVAG00000016429	exosc10	67	49.821	Cyprinodon_variegatus
ENSCSAVG00000009049	-	94	48.294	ENSDARG00000037708	exosc10	61	48.294	Danio_rerio
ENSCSAVG00000009049	-	100	46.309	ENSDNOG00000011301	EXOSC10	66	46.309	Dasypus_novemcinctus
ENSCSAVG00000009049	-	100	47.483	ENSDORG00000003769	Exosc10	69	47.483	Dipodomys_ordii
ENSCSAVG00000009049	-	85	43.103	FBgn0038269	Rrp6	63	38.715	Drosophila_melanogaster
ENSCSAVG00000009049	-	94	47.500	ENSETEG00000000830	EXOSC10	65	47.500	Echinops_telfairi
ENSCSAVG00000009049	-	59	46.418	ENSEBUG00000004395	exosc10	56	46.418	Eptatretus_burgeri
ENSCSAVG00000009049	-	100	46.980	ENSEASG00005018716	EXOSC10	72	48.307	Equus_asinus_asinus
ENSCSAVG00000009049	-	100	46.980	ENSECAG00000011639	EXOSC10	66	46.980	Equus_caballus
ENSCSAVG00000009049	-	99	44.804	ENSEEUG00000001166	EXOSC10	66	44.804	Erinaceus_europaeus
ENSCSAVG00000009049	-	94	49.283	ENSELUG00000012870	exosc10	69	49.283	Esox_lucius
ENSCSAVG00000009049	-	100	47.148	ENSFCAG00000000052	EXOSC10	69	47.148	Felis_catus
ENSCSAVG00000009049	-	99	48.735	ENSFALG00000010287	EXOSC10	65	48.735	Ficedula_albicollis
ENSCSAVG00000009049	-	100	47.563	ENSFDAG00000002942	EXOSC10	68	47.563	Fukomys_damarensis
ENSCSAVG00000009049	-	100	46.723	ENSFHEG00000010678	exosc10	66	48.754	Fundulus_heteroclitus
ENSCSAVG00000009049	-	88	46.641	ENSGMOG00000006131	exosc10	64	46.641	Gadus_morhua
ENSCSAVG00000009049	-	100	46.891	ENSGALG00000003086	EXOSC10	64	46.891	Gallus_gallus
ENSCSAVG00000009049	-	94	49.288	ENSGAFG00000019222	exosc10	67	49.198	Gambusia_affinis
ENSCSAVG00000009049	-	94	48.741	ENSGACG00000007037	exosc10	64	48.741	Gasterosteus_aculeatus
ENSCSAVG00000009049	-	99	46.218	ENSGAGG00000000251	EXOSC10	63	48.936	Gopherus_agassizii
ENSCSAVG00000009049	-	100	47.483	ENSGGOG00000010572	EXOSC10	68	47.483	Gorilla_gorilla
ENSCSAVG00000009049	-	97	48.305	ENSHBUG00000020328	exosc10	67	48.305	Haplochromis_burtoni
ENSCSAVG00000009049	-	100	47.059	ENSHGLG00000011944	EXOSC10	68	47.059	Heterocephalus_glaber_female
ENSCSAVG00000009049	-	100	47.059	ENSHGLG00100014444	EXOSC10	68	47.059	Heterocephalus_glaber_male
ENSCSAVG00000009049	-	94	50.712	ENSHCOG00000016164	exosc10	61	50.712	Hippocampus_comes
ENSCSAVG00000009049	-	93	48.545	ENSIPUG00000021971	exosc10	60	48.545	Ictalurus_punctatus
ENSCSAVG00000009049	-	100	47.899	ENSSTOG00000005459	EXOSC10	68	47.899	Ictidomys_tridecemlineatus
ENSCSAVG00000009049	-	100	47.731	ENSJJAG00000013716	Exosc10	68	47.731	Jaculus_jaculus
ENSCSAVG00000009049	-	94	48.932	ENSKMAG00000015540	exosc10	62	48.932	Kryptolebias_marmoratus
ENSCSAVG00000009049	-	100	48.229	ENSLBEG00000022229	exosc10	65	48.229	Labrus_bergylta
ENSCSAVG00000009049	-	99	48.229	ENSLACG00000016691	EXOSC10	65	48.054	Latimeria_chalumnae
ENSCSAVG00000009049	-	100	47.906	ENSLOCG00000006443	exosc10	65	47.906	Lepisosteus_oculatus
ENSCSAVG00000009049	-	100	46.812	ENSLAFG00000016894	EXOSC10	66	46.812	Loxodonta_africana
ENSCSAVG00000009049	-	100	47.731	ENSMFAG00000038874	EXOSC10	68	47.731	Macaca_fascicularis
ENSCSAVG00000009049	-	100	47.483	ENSMMUG00000019322	EXOSC10	68	47.483	Macaca_mulatta
ENSCSAVG00000009049	-	100	47.731	ENSMNEG00000035812	EXOSC10	68	47.731	Macaca_nemestrina
ENSCSAVG00000009049	-	100	47.731	ENSMLEG00000025160	EXOSC10	68	47.731	Mandrillus_leucophaeus
ENSCSAVG00000009049	-	100	48.241	ENSMAMG00000019375	exosc10	65	49.644	Mastacembelus_armatus
ENSCSAVG00000009049	-	97	48.718	ENSMZEG00005013730	exosc10	64	48.718	Maylandia_zebra
ENSCSAVG00000009049	-	99	47.039	ENSMGAG00000004665	EXOSC10	67	47.039	Meleagris_gallopavo
ENSCSAVG00000009049	-	97	48.270	ENSMAUG00000019261	Exosc10	92	48.270	Mesocricetus_auratus
ENSCSAVG00000009049	-	100	46.980	ENSMICG00000003858	EXOSC10	68	46.980	Microcebus_murinus
ENSCSAVG00000009049	-	97	48.097	ENSMOCG00000016509	Exosc10	92	48.097	Microtus_ochrogaster
ENSCSAVG00000009049	-	94	49.551	ENSMMOG00000009265	exosc10	65	49.551	Mola_mola
ENSCSAVG00000009049	-	100	45.987	ENSMODG00000011194	EXOSC10	66	46.154	Monodelphis_domestica
ENSCSAVG00000009049	-	100	47.563	ENSMALG00000021322	exosc10	65	47.563	Monopterus_albus
ENSCSAVG00000009049	-	100	47.483	MGP_CAROLIEiJ_G0026802	Exosc10	92	48.180	Mus_caroli
ENSCSAVG00000009049	-	100	47.731	ENSMUSG00000017264	Exosc10	92	48.097	Mus_musculus
ENSCSAVG00000009049	-	100	47.731	MGP_PahariEiJ_G0029150	Exosc10	92	48.097	Mus_pahari
ENSCSAVG00000009049	-	100	47.483	MGP_SPRETEiJ_G0027795	Exosc10	92	48.180	Mus_spretus
ENSCSAVG00000009049	-	100	46.812	ENSMPUG00000016434	EXOSC10	64	46.812	Mustela_putorius_furo
ENSCSAVG00000009049	-	100	47.148	ENSMLUG00000004276	EXOSC10	66	47.148	Myotis_lucifugus
ENSCSAVG00000009049	-	100	47.731	ENSNGAG00000023829	Exosc10	68	47.731	Nannospalax_galili
ENSCSAVG00000009049	-	94	49.822	ENSNBRG00000006256	exosc10	66	49.822	Neolamprologus_brichardi
ENSCSAVG00000009049	-	100	48.067	ENSNLEG00000009539	EXOSC10	69	48.067	Nomascus_leucogenys
ENSCSAVG00000009049	-	100	47.899	ENSOPRG00000012091	EXOSC10	66	47.899	Ochotona_princeps
ENSCSAVG00000009049	-	100	47.395	ENSODEG00000013285	EXOSC10	68	47.395	Octodon_degus
ENSCSAVG00000009049	-	94	49.822	ENSONIG00000002322	exosc10	70	49.822	Oreochromis_niloticus
ENSCSAVG00000009049	-	100	46.179	ENSOANG00000013322	EXOSC10	66	46.179	Ornithorhynchus_anatinus
ENSCSAVG00000009049	-	100	47.395	ENSOCUG00000013039	EXOSC10	66	47.395	Oryctolagus_cuniculus
ENSCSAVG00000009049	-	100	47.571	ENSORLG00000005117	exosc10	64	50.380	Oryzias_latipes
ENSCSAVG00000009049	-	100	47.571	ENSORLG00020013529	exosc10	79	45.605	Oryzias_latipes_hni
ENSCSAVG00000009049	-	100	47.404	ENSORLG00015005525	exosc10	66	48.246	Oryzias_latipes_hsok
ENSCSAVG00000009049	-	94	48.577	ENSOMEG00000003337	exosc10	64	48.577	Oryzias_melastigma
ENSCSAVG00000009049	-	83	50.803	ENSOGAG00000013662	EXOSC10	55	50.803	Otolemur_garnettii
ENSCSAVG00000009049	-	100	46.745	ENSOARG00000003668	EXOSC10	66	46.745	Ovis_aries
ENSCSAVG00000009049	-	100	47.731	ENSPPAG00000038356	EXOSC10	68	47.731	Pan_paniscus
ENSCSAVG00000009049	-	100	47.315	ENSPPRG00000022976	EXOSC10	68	47.315	Panthera_pardus
ENSCSAVG00000009049	-	94	48.214	ENSPTIG00000012735	EXOSC10	67	48.214	Panthera_tigris_altaica
ENSCSAVG00000009049	-	100	46.362	ENSPTRG00000000140	EXOSC10	66	45.854	Pan_troglodytes
ENSCSAVG00000009049	-	100	47.395	ENSPANG00000026088	EXOSC10	68	47.395	Papio_anubis
ENSCSAVG00000009049	-	94	46.964	ENSPKIG00000013098	exosc10	60	46.964	Paramormyrops_kingsleyae
ENSCSAVG00000009049	-	100	45.546	ENSPSIG00000005078	EXOSC10	64	45.546	Pelodiscus_sinensis
ENSCSAVG00000009049	-	94	48.561	ENSPMGG00000022241	exosc10	92	48.561	Periophthalmus_magnuspinnatus
ENSCSAVG00000009049	-	100	47.483	ENSPEMG00000007753	Exosc10	81	47.483	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009049	-	84	41.520	ENSPMAG00000006909	exosc10	99	41.520	Petromyzon_marinus
ENSCSAVG00000009049	-	96	47.100	ENSPCIG00000004840	EXOSC10	89	47.913	Phascolarctos_cinereus
ENSCSAVG00000009049	-	97	48.034	ENSPFOG00000004744	exosc10	64	48.034	Poecilia_formosa
ENSCSAVG00000009049	-	100	47.833	ENSPLAG00000010253	exosc10	68	47.833	Poecilia_latipinna
ENSCSAVG00000009049	-	100	47.833	ENSPMEG00000005740	exosc10	68	47.833	Poecilia_mexicana
ENSCSAVG00000009049	-	97	48.205	ENSPREG00000016285	exosc10	68	49.288	Poecilia_reticulata
ENSCSAVG00000009049	-	100	48.067	ENSPPYG00000001891	EXOSC10	64	48.067	Pongo_abelii
ENSCSAVG00000009049	-	98	44.539	ENSPCAG00000001583	EXOSC10	73	44.539	Procavia_capensis
ENSCSAVG00000009049	-	100	47.899	ENSPCOG00000013742	EXOSC10	68	47.899	Propithecus_coquereli
ENSCSAVG00000009049	-	100	47.148	ENSPVAG00000014780	EXOSC10	66	47.148	Pteropus_vampyrus
ENSCSAVG00000009049	-	97	48.718	ENSPNYG00000007387	exosc10	65	49.822	Pundamilia_nyererei
ENSCSAVG00000009049	-	93	48.727	ENSPNAG00000028864	exosc10	60	48.727	Pygocentrus_nattereri
ENSCSAVG00000009049	-	100	47.395	ENSRNOG00000010719	Exosc10	66	47.395	Rattus_norvegicus
ENSCSAVG00000009049	-	100	43.750	ENSRBIG00000039772	EXOSC10	66	43.750	Rhinopithecus_bieti
ENSCSAVG00000009049	-	100	47.731	ENSRROG00000036700	EXOSC10	68	47.731	Rhinopithecus_roxellana
ENSCSAVG00000009049	-	72	40.371	YOR001W	-	54	40.371	Saccharomyces_cerevisiae
ENSCSAVG00000009049	-	100	44.874	ENSSBOG00000020768	EXOSC10	67	44.874	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009049	-	99	46.350	ENSSHAG00000013572	EXOSC10	68	46.520	Sarcophilus_harrisii
ENSCSAVG00000009049	-	100	45.349	ENSSFOG00015004512	exosc10	67	45.349	Scleropages_formosus
ENSCSAVG00000009049	-	100	47.571	ENSSMAG00000017318	exosc10	66	48.438	Scophthalmus_maximus
ENSCSAVG00000009049	-	94	49.642	ENSSDUG00000006646	exosc10	67	49.551	Seriola_dumerili
ENSCSAVG00000009049	-	99	48.387	ENSSLDG00000025554	exosc10	70	48.387	Seriola_lalandi_dorsalis
ENSCSAVG00000009049	-	85	45.635	ENSSARG00000013171	EXOSC10	67	45.635	Sorex_araneus
ENSCSAVG00000009049	-	99	46.769	ENSSPUG00000006844	EXOSC10	94	46.701	Sphenodon_punctatus
ENSCSAVG00000009049	-	100	47.236	ENSSPAG00000007053	exosc10	65	47.236	Stegastes_partitus
ENSCSAVG00000009049	-	91	48.066	ENSSSCG00000003412	EXOSC10	66	48.066	Sus_scrofa
ENSCSAVG00000009049	-	99	47.306	ENSTGUG00000002231	EXOSC10	69	47.306	Taeniopygia_guttata
ENSCSAVG00000009049	-	100	48.311	ENSTRUG00000012484	exosc10	64	48.311	Takifugu_rubripes
ENSCSAVG00000009049	-	100	48.731	ENSTNIG00000015181	exosc10	67	48.731	Tetraodon_nigroviridis
ENSCSAVG00000009049	-	100	46.477	ENSTTRG00000001320	EXOSC10	66	46.477	Tursiops_truncatus
ENSCSAVG00000009049	-	100	47.148	ENSUAMG00000014404	EXOSC10	70	47.148	Ursus_americanus
ENSCSAVG00000009049	-	100	46.712	ENSUMAG00000023413	EXOSC10	86	46.712	Ursus_maritimus
ENSCSAVG00000009049	-	93	48.370	ENSVPAG00000004629	EXOSC10	61	48.370	Vicugna_pacos
ENSCSAVG00000009049	-	91	47.698	ENSVVUG00000027116	EXOSC10	66	47.698	Vulpes_vulpes
ENSCSAVG00000009049	-	100	42.521	ENSXETG00000006318	exosc10	67	42.521	Xenopus_tropicalis
ENSCSAVG00000009049	-	97	48.034	ENSXCOG00000004665	exosc10	66	48.845	Xiphophorus_couchianus
ENSCSAVG00000009049	-	97	48.034	ENSXMAG00000011246	exosc10	68	49.110	Xiphophorus_maculatus