EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009055 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7313 bases
Position: chrreftig_0:1681130-1688442
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015433	KH_1	PF00013.29	1.1e-08	1	1
ENSCSAVP00000015432	KH_1	PF00013.29	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015611	-	1251	-	ENSCSAVP00000015433	417 (aa)	-	H2ZCW7
ENSCSAVT00000015610	-	2027	-	ENSCSAVP00000015432	578 (aa)	-	H2ZCW6

Gene Model

Click here to download ENSCSAVG00000009055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009055's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009055	-	64	65.074	ENSAPOG00000012341	sf1	61	53.147	Acanthochromis_polyacanthus
ENSCSAVG00000009055	-	56	66.667	ENSAMEG00000017828	SF1	88	46.791	Ailuropoda_melanoleuca
ENSCSAVG00000009055	-	72	61.056	ENSACIG00000016514	sf1	56	53.989	Amphilophus_citrinellus
ENSCSAVG00000009055	-	64	65.074	ENSAOCG00000010934	sf1	61	52.914	Amphiprion_ocellaris
ENSCSAVG00000009055	-	64	65.074	ENSAPEG00000009498	sf1	61	52.914	Amphiprion_percula
ENSCSAVG00000009055	-	64	64.706	ENSATEG00000001894	sf1	51	55.914	Anabas_testudineus
ENSCSAVG00000009055	-	88	55.014	ENSANAG00000026664	-	86	59.137	Aotus_nancymaae
ENSCSAVG00000009055	-	73	60.197	ENSANAG00000022607	-	87	55.076	Aotus_nancymaae
ENSCSAVG00000009055	-	72	60.797	ENSACLG00000007633	sf1	62	52.163	Astatotilapia_calliptera
ENSCSAVG00000009055	-	56	66.667	ENSBTAG00000001035	SF1	58	57.865	Bos_taurus
ENSCSAVG00000009055	-	56	66.667	ENSCJAG00000002780	SF1	90	47.746	Callithrix_jacchus
ENSCSAVG00000009055	-	56	66.667	ENSCAFG00000014239	SF1	90	47.746	Canis_familiaris
ENSCSAVG00000009055	-	56	66.667	ENSCAFG00020014381	SF1	90	47.746	Canis_lupus_dingo
ENSCSAVG00000009055	-	56	66.667	ENSCHIG00000025867	SF1	93	53.372	Capra_hircus
ENSCSAVG00000009055	-	50	74.286	ENSTSYG00000033618	SF1	80	71.429	Carlito_syrichta
ENSCSAVG00000009055	-	88	54.743	ENSCAPG00000010762	SF1	79	54.832	Cavia_aperea
ENSCSAVG00000009055	-	72	63.455	ENSCPOG00000012290	SF1	95	53.179	Cavia_porcellus
ENSCSAVG00000009055	-	83	50.418	ENSCCAG00000023781	-	80	53.810	Cebus_capucinus
ENSCSAVG00000009055	-	72	63.787	ENSCCAG00000037881	SF1	86	59.137	Cebus_capucinus
ENSCSAVG00000009055	-	72	63.787	ENSCATG00000011564	SF1	86	59.137	Cercocebus_atys
ENSCSAVG00000009055	-	56	66.667	ENSCSAG00000007258	SF1	93	53.372	Chlorocebus_sabaeus
ENSCSAVG00000009055	-	72	63.667	ENSCHOG00000006008	SF1	75	54.433	Choloepus_hoffmanni
ENSCSAVG00000009055	-	68	58.696	ENSCPBG00000023763	SF1	65	54.297	Chrysemys_picta_bellii
ENSCSAVG00000009055	-	60	92.400	ENSCING00000005564	-	80	87.056	Ciona_intestinalis
ENSCSAVG00000009055	-	72	63.787	ENSCANG00000042201	SF1	86	59.137	Colobus_angolensis_palliatus
ENSCSAVG00000009055	-	87	56.438	ENSCGRG00001003677	Sf1	78	54.622	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009055	-	87	56.438	ENSCGRG00000001708	Sf1	94	52.987	Cricetulus_griseus_crigri
ENSCSAVG00000009055	-	60	67.315	ENSCSEG00000014375	sf1	78	50.998	Cynoglossus_semilaevis
ENSCSAVG00000009055	-	72	62.829	ENSCVAG00000001670	sf1	72	55.411	Cyprinodon_variegatus
ENSCSAVG00000009055	-	63	67.300	ENSDARG00000008188	sf1	70	50.343	Danio_rerio
ENSCSAVG00000009055	-	56	66.667	ENSDNOG00000001282	SF1	93	53.372	Dasypus_novemcinctus
ENSCSAVG00000009055	-	56	66.667	ENSDORG00000016334	Sf1	90	47.746	Dipodomys_ordii
ENSCSAVG00000009055	-	62	58.845	ENSEBUG00000012728	sf1	51	55.615	Eptatretus_burgeri
ENSCSAVG00000009055	-	56	66.361	ENSEASG00005018272	SF1	93	53.179	Equus_asinus_asinus
ENSCSAVG00000009055	-	56	66.667	ENSECAG00000024544	SF1	93	53.372	Equus_caballus
ENSCSAVG00000009055	-	72	63.787	ENSEEUG00000001058	SF1	95	59.580	Erinaceus_europaeus
ENSCSAVG00000009055	-	60	67.188	ENSELUG00000013225	sf1	55	57.981	Esox_lucius
ENSCSAVG00000009055	-	56	66.667	ENSFCAG00000012231	SF1	90	47.746	Felis_catus
ENSCSAVG00000009055	-	88	55.014	ENSFDAG00000009833	SF1	79	55.042	Fukomys_damarensis
ENSCSAVG00000009055	-	65	65.818	ENSFHEG00000022656	sf1	53	56.316	Fundulus_heteroclitus
ENSCSAVG00000009055	-	64	65.556	ENSGMOG00000007469	sf1	75	56.109	Gadus_morhua
ENSCSAVG00000009055	-	72	62.013	ENSGAFG00000019284	sf1	96	53.257	Gambusia_affinis
ENSCSAVG00000009055	-	60	67.315	ENSGACG00000000826	sf1	69	52.235	Gasterosteus_aculeatus
ENSCSAVG00000009055	-	68	58.937	ENSGAGG00000021691	SF1	71	54.960	Gopherus_agassizii
ENSCSAVG00000009055	-	72	61.639	ENSHBUG00000011598	sf1	58	53.461	Haplochromis_burtoni
ENSCSAVG00000009055	-	88	55.014	ENSHGLG00000009541	SF1	90	47.746	Heterocephalus_glaber_female
ENSCSAVG00000009055	-	79	58.559	ENSHGLG00100008255	-	95	51.709	Heterocephalus_glaber_male
ENSCSAVG00000009055	-	88	55.014	ENSHGLG00100013879	-	88	49.728	Heterocephalus_glaber_male
ENSCSAVG00000009055	-	53	65.472	ENSHGLG00100008076	-	79	58.594	Heterocephalus_glaber_male
ENSCSAVG00000009055	-	72	62.092	ENSHCOG00000011388	sf1	79	49.376	Hippocampus_comes
ENSCSAVG00000009055	-	71	61.356	ENSSTOG00000024353	-	73	50.966	Ictidomys_tridecemlineatus
ENSCSAVG00000009055	-	56	66.667	ENSSTOG00000009790	-	91	47.746	Ictidomys_tridecemlineatus
ENSCSAVG00000009055	-	56	66.667	ENSJJAG00000011788	Sf1	90	47.579	Jaculus_jaculus
ENSCSAVG00000009055	-	72	60.912	ENSKMAG00000005854	sf1	63	58.852	Kryptolebias_marmoratus
ENSCSAVG00000009055	-	72	61.889	ENSLBEG00000019836	sf1	54	57.507	Labrus_bergylta
ENSCSAVG00000009055	-	72	62.333	ENSLACG00000018493	SF1	91	46.337	Latimeria_chalumnae
ENSCSAVG00000009055	-	74	61.165	ENSLOCG00000002130	sf1	64	60.584	Lepisosteus_oculatus
ENSCSAVG00000009055	-	56	65.465	ENSLAFG00000007201	SF1	72	56.077	Loxodonta_africana
ENSCSAVG00000009055	-	72	63.787	ENSMFAG00000033122	SF1	86	59.137	Macaca_fascicularis
ENSCSAVG00000009055	-	72	63.787	ENSMMUG00000022606	SF1	96	53.372	Macaca_mulatta
ENSCSAVG00000009055	-	72	63.787	ENSMNEG00000037901	SF1	86	59.137	Macaca_nemestrina
ENSCSAVG00000009055	-	72	63.787	ENSMLEG00000040706	SF1	86	59.137	Mandrillus_leucophaeus
ENSCSAVG00000009055	-	72	61.765	ENSMAMG00000001780	sf1	51	56.486	Mastacembelus_armatus
ENSCSAVG00000009055	-	72	61.238	ENSMZEG00005009196	sf1	58	52.983	Maylandia_zebra
ENSCSAVG00000009055	-	87	56.438	ENSMAUG00000014064	Sf1	90	47.245	Mesocricetus_auratus
ENSCSAVG00000009055	-	72	63.576	ENSMICG00000001202	SF1	86	58.987	Microcebus_murinus
ENSCSAVG00000009055	-	87	56.438	ENSMOCG00000022038	Sf1	90	47.245	Microtus_ochrogaster
ENSCSAVG00000009055	-	72	60.465	ENSMMOG00000020474	sf1	71	53.441	Mola_mola
ENSCSAVG00000009055	-	85	56.180	ENSMODG00000029407	SF1	90	58.810	Monodelphis_domestica
ENSCSAVG00000009055	-	72	61.130	ENSMALG00000020521	sf1	81	53.119	Monopterus_albus
ENSCSAVG00000009055	-	87	56.438	MGP_CAROLIEiJ_G0022607	Sf1	99	72.727	Mus_caroli
ENSCSAVG00000009055	-	87	56.438	ENSMUSG00000024949	Sf1	99	72.727	Mus_musculus
ENSCSAVG00000009055	-	87	56.438	MGP_PahariEiJ_G0014101	Sf1	99	72.727	Mus_pahari
ENSCSAVG00000009055	-	87	56.438	MGP_SPRETEiJ_G0023518	Sf1	99	72.727	Mus_spretus
ENSCSAVG00000009055	-	56	66.667	ENSMPUG00000012684	SF1	55	57.865	Mustela_putorius_furo
ENSCSAVG00000009055	-	56	66.667	ENSMLUG00000015217	-	55	57.865	Myotis_lucifugus
ENSCSAVG00000009055	-	72	60.465	ENSMLUG00000029800	-	89	50.763	Myotis_lucifugus
ENSCSAVG00000009055	-	87	56.438	ENSNGAG00000005550	Sf1	90	47.579	Nannospalax_galili
ENSCSAVG00000009055	-	72	62.333	ENSNBRG00000017606	sf1	62	57.946	Neolamprologus_brichardi
ENSCSAVG00000009055	-	72	63.787	ENSNLEG00000005236	-	86	59.137	Nomascus_leucogenys
ENSCSAVG00000009055	-	56	67.077	ENSMEUG00000013424	SF1	96	53.682	Notamacropus_eugenii
ENSCSAVG00000009055	-	50	68.750	ENSOPRG00000005008	SF1	96	53.542	Ochotona_princeps
ENSCSAVG00000009055	-	72	60.465	ENSODEG00000006102	-	74	53.731	Octodon_degus
ENSCSAVG00000009055	-	72	61.238	ENSONIG00000015728	sf1	58	52.983	Oreochromis_niloticus
ENSCSAVG00000009055	-	99	49.524	ENSOANG00000002909	SF1	86	57.550	Ornithorhynchus_anatinus
ENSCSAVG00000009055	-	56	66.667	ENSOCUG00000026486	SF1	91	47.746	Oryctolagus_cuniculus
ENSCSAVG00000009055	-	65	61.381	ENSORLG00000011853	sf1	65	56.209	Oryzias_latipes
ENSCSAVG00000009055	-	65	61.125	ENSORLG00020011834	sf1	53	55.673	Oryzias_latipes_hni
ENSCSAVG00000009055	-	63	62.567	ENSORLG00015012855	sf1	53	54.974	Oryzias_latipes_hsok
ENSCSAVG00000009055	-	72	62.418	ENSOMEG00000005210	sf1	51	57.263	Oryzias_melastigma
ENSCSAVG00000009055	-	56	66.667	ENSOGAG00000016196	SF1	90	47.746	Otolemur_garnettii
ENSCSAVG00000009055	-	56	66.667	ENSOARG00000009166	SF1	73	58.810	Ovis_aries
ENSCSAVG00000009055	-	72	63.907	ENSPPAG00000002799	-	87	59.137	Pan_paniscus
ENSCSAVG00000009055	-	56	66.667	ENSPPRG00000013566	SF1	90	47.746	Panthera_pardus
ENSCSAVG00000009055	-	87	56.438	ENSPTIG00000016141	SF1	80	55.042	Panthera_tigris_altaica
ENSCSAVG00000009055	-	72	63.907	ENSPTRG00000003846	SF1	96	58.993	Pan_troglodytes
ENSCSAVG00000009055	-	72	63.787	ENSPANG00000020754	SF1	93	53.372	Papio_anubis
ENSCSAVG00000009055	-	86	55.956	ENSPKIG00000012116	sf1	95	56.021	Paramormyrops_kingsleyae
ENSCSAVG00000009055	-	50	55.882	ENSPSIG00000003610	SF1	81	48.175	Pelodiscus_sinensis
ENSCSAVG00000009055	-	87	56.438	ENSPEMG00000010463	Sf1	90	47.245	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009055	-	56	66.667	ENSPCIG00000018173	SF1	90	50.172	Phascolarctos_cinereus
ENSCSAVG00000009055	-	72	62.215	ENSPFOG00000013683	sf1	82	49.281	Poecilia_formosa
ENSCSAVG00000009055	-	72	62.215	ENSPLAG00000018076	sf1	84	49.281	Poecilia_latipinna
ENSCSAVG00000009055	-	72	62.215	ENSPMEG00000005726	sf1	86	49.460	Poecilia_mexicana
ENSCSAVG00000009055	-	60	68.093	ENSPREG00000004155	sf1	51	57.951	Poecilia_reticulata
ENSCSAVG00000009055	-	56	66.667	ENSPPYG00000003098	-	97	53.565	Pongo_abelii
ENSCSAVG00000009055	-	56	66.667	ENSPCAG00000013631	SF1	76	53.448	Procavia_capensis
ENSCSAVG00000009055	-	72	63.576	ENSPCOG00000027546	SF1	86	58.987	Propithecus_coquereli
ENSCSAVG00000009055	-	56	66.667	ENSPVAG00000016938	SF1	77	53.448	Pteropus_vampyrus
ENSCSAVG00000009055	-	72	61.238	ENSPNYG00000004673	sf1	58	52.983	Pundamilia_nyererei
ENSCSAVG00000009055	-	72	62.583	ENSPNAG00000013072	sf1	52	56.986	Pygocentrus_nattereri
ENSCSAVG00000009055	-	56	66.667	ENSRNOG00000021085	Sf1	89	51.754	Rattus_norvegicus
ENSCSAVG00000009055	-	72	63.787	ENSRBIG00000042818	SF1	86	59.137	Rhinopithecus_bieti
ENSCSAVG00000009055	-	88	55.014	ENSRROG00000045655	SF1	95	54.059	Rhinopithecus_roxellana
ENSCSAVG00000009055	-	56	44.309	YLR116W	MSL5	90	35.189	Saccharomyces_cerevisiae
ENSCSAVG00000009055	-	72	56.478	ENSSBOG00000022267	-	89	50.127	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009055	-	60	69.841	ENSSHAG00000006841	SF1	86	55.054	Sarcophilus_harrisii
ENSCSAVG00000009055	-	60	67.857	ENSSFOG00015021978	sf1	64	49.321	Scleropages_formosus
ENSCSAVG00000009055	-	64	65.683	ENSSMAG00000007549	sf1	76	53.010	Scophthalmus_maximus
ENSCSAVG00000009055	-	60	67.315	ENSSDUG00000003903	sf1	70	54.915	Seriola_dumerili
ENSCSAVG00000009055	-	60	67.315	ENSSLDG00000013075	sf1	51	56.284	Seriola_lalandi_dorsalis
ENSCSAVG00000009055	-	72	62.458	ENSSARG00000008180	SF1	99	51.154	Sorex_araneus
ENSCSAVG00000009055	-	60	69.444	ENSSPUG00000012907	SF1	78	54.701	Sphenodon_punctatus
ENSCSAVG00000009055	-	60	67.315	ENSSPAG00000019060	sf1	61	51.643	Stegastes_partitus
ENSCSAVG00000009055	-	56	66.667	ENSSSCG00000013021	SF1	93	53.372	Sus_scrofa
ENSCSAVG00000009055	-	70	53.821	ENSTNIG00000004820	sf1	82	48.164	Tetraodon_nigroviridis
ENSCSAVG00000009055	-	52	73.488	ENSTBEG00000013133	SF1	64	53.691	Tupaia_belangeri
ENSCSAVG00000009055	-	56	61.468	ENSTTRG00000008857	SF1	95	49.711	Tursiops_truncatus
ENSCSAVG00000009055	-	88	55.014	ENSUMAG00000007268	SF1	85	57.143	Ursus_maritimus
ENSCSAVG00000009055	-	56	66.667	ENSVVUG00000028585	SF1	93	53.372	Vulpes_vulpes
ENSCSAVG00000009055	-	99	48.077	ENSXETG00000008434	sf1	98	45.546	Xenopus_tropicalis
ENSCSAVG00000009055	-	72	62.500	ENSXCOG00000003704	sf1	77	60.147	Xiphophorus_couchianus
ENSCSAVG00000009055	-	60	68.093	ENSXMAG00000007822	sf1	82	49.820	Xiphophorus_maculatus