EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009085 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 11866 bases
Position: chrreftig_16:1995490-2007355
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015482	PAP_RNA-bind	PF04926.15	1.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015660	-	1554	-	ENSCSAVP00000015482	497 (aa)	-	H2ZD16
ENSCSAVT00000015659	-	792	-	ENSCSAVP00000015481	245 (aa)	-	H2ZD15
ENSCSAVT00000015661	-	1496	-	ENSCSAVP00000015483	250 (aa)	-	H2ZD17

Gene Model

Click here to download ENSCSAVG00000009085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009085	-	97	65.361	ENSG00000115421	PAPOLG	100	70.085	Homo_sapiens
ENSCSAVG00000009085	-	97	65.361	ENSAPOG00000004798	papolg	71	65.361	Acanthochromis_polyacanthus
ENSCSAVG00000009085	-	97	65.361	ENSAMEG00000018227	PAPOLG	66	65.361	Ailuropoda_melanoleuca
ENSCSAVG00000009085	-	97	64.948	ENSACIG00000010546	papolg	71	64.948	Amphilophus_citrinellus
ENSCSAVG00000009085	-	97	65.155	ENSAOCG00000010254	papolg	58	65.155	Amphiprion_ocellaris
ENSCSAVG00000009085	-	97	65.361	ENSAPEG00000006944	papolg	58	65.361	Amphiprion_percula
ENSCSAVG00000009085	-	99	64.113	ENSATEG00000009007	papolg	79	64.113	Anabas_testudineus
ENSCSAVG00000009085	-	97	63.244	ENSAPLG00000006813	PAPOLG	65	63.244	Anas_platyrhynchos
ENSCSAVG00000009085	-	71	57.382	ENSACAG00000015048	-	60	57.382	Anolis_carolinensis
ENSCSAVG00000009085	-	97	65.361	ENSANAG00000024627	PAPOLG	68	65.361	Aotus_nancymaae
ENSCSAVG00000009085	-	97	65.155	ENSACLG00000015592	papolg	57	65.155	Astatotilapia_calliptera
ENSCSAVG00000009085	-	97	64.742	ENSAMXG00000004611	papolg	65	64.742	Astyanax_mexicanus
ENSCSAVG00000009085	-	97	65.361	ENSBTAG00000007414	PAPOLG	65	65.361	Bos_taurus
ENSCSAVG00000009085	-	97	65.361	ENSCJAG00000009102	PAPOLG	66	65.361	Callithrix_jacchus
ENSCSAVG00000009085	-	97	65.155	ENSCAFG00000002975	PAPOLG	60	65.155	Canis_familiaris
ENSCSAVG00000009085	-	97	65.361	ENSCAFG00020026859	PAPOLG	69	65.361	Canis_lupus_dingo
ENSCSAVG00000009085	-	97	65.361	ENSCHIG00000015082	PAPOLG	65	65.361	Capra_hircus
ENSCSAVG00000009085	-	97	65.155	ENSTSYG00000004947	PAPOLG	65	65.155	Carlito_syrichta
ENSCSAVG00000009085	-	75	62.567	ENSCAPG00000014901	-	98	62.567	Cavia_aperea
ENSCSAVG00000009085	-	97	65.361	ENSCPOG00000010306	PAPOLG	65	65.361	Cavia_porcellus
ENSCSAVG00000009085	-	97	65.361	ENSCCAG00000026893	PAPOLG	68	65.361	Cebus_capucinus
ENSCSAVG00000009085	-	83	66.047	ENSCATG00000044395	PAPOLG	62	66.047	Cercocebus_atys
ENSCSAVG00000009085	-	97	65.361	ENSCLAG00000008603	PAPOLG	65	65.361	Chinchilla_lanigera
ENSCSAVG00000009085	-	97	65.361	ENSCSAG00000014408	PAPOLG	66	65.361	Chlorocebus_sabaeus
ENSCSAVG00000009085	-	84	66.268	ENSCHOG00000014028	PAPOLG	63	66.268	Choloepus_hoffmanni
ENSCSAVG00000009085	-	100	90.964	ENSCING00000024664	-	93	90.964	Ciona_intestinalis
ENSCSAVG00000009085	-	97	65.155	ENSCANG00000038120	PAPOLG	68	65.155	Colobus_angolensis_palliatus
ENSCSAVG00000009085	-	97	65.155	ENSCGRG00001014951	Papolg	66	65.155	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009085	-	97	65.155	ENSCGRG00000005552	-	66	65.155	Cricetulus_griseus_crigri
ENSCSAVG00000009085	-	97	64.948	ENSCSEG00000000771	papolg	69	64.948	Cynoglossus_semilaevis
ENSCSAVG00000009085	-	97	65.361	ENSCVAG00000016602	papolg	86	65.361	Cyprinodon_variegatus
ENSCSAVG00000009085	-	97	65.155	ENSDARG00000012141	papolg	65	65.155	Danio_rerio
ENSCSAVG00000009085	-	97	63.093	ENSDNOG00000011326	PAPOLG	65	63.093	Dasypus_novemcinctus
ENSCSAVG00000009085	-	82	68.719	ENSDORG00000016228	Papolg	94	68.719	Dipodomys_ordii
ENSCSAVG00000009085	-	97	50.722	ENSETEG00000011815	PAPOLG	65	50.615	Echinops_telfairi
ENSCSAVG00000009085	-	91	48.458	ENSEBUG00000005042	-	77	48.678	Eptatretus_burgeri
ENSCSAVG00000009085	-	77	62.985	ENSEBUG00000004020	papolg	86	59.358	Eptatretus_burgeri
ENSCSAVG00000009085	-	97	65.361	ENSEASG00005002038	PAPOLG	65	65.361	Equus_asinus_asinus
ENSCSAVG00000009085	-	97	65.361	ENSECAG00000009859	PAPOLG	64	65.361	Equus_caballus
ENSCSAVG00000009085	-	97	57.732	ENSEEUG00000006196	PAPOLG	66	57.732	Erinaceus_europaeus
ENSCSAVG00000009085	-	99	64.400	ENSELUG00000014497	papolg	60	64.400	Esox_lucius
ENSCSAVG00000009085	-	97	65.361	ENSFCAG00000026126	PAPOLG	65	65.361	Felis_catus
ENSCSAVG00000009085	-	96	61.983	ENSFALG00000011079	PAPOLG	63	61.983	Ficedula_albicollis
ENSCSAVG00000009085	-	97	65.361	ENSFDAG00000010662	PAPOLG	63	65.361	Fukomys_damarensis
ENSCSAVG00000009085	-	97	64.742	ENSGMOG00000018772	papolg	73	64.742	Gadus_morhua
ENSCSAVG00000009085	-	97	62.033	ENSGALG00000007853	PAPOLG	67	62.033	Gallus_gallus
ENSCSAVG00000009085	-	97	65.155	ENSGAFG00000003263	papolg	57	65.155	Gambusia_affinis
ENSCSAVG00000009085	-	97	64.948	ENSGACG00000002718	papolg	65	64.948	Gasterosteus_aculeatus
ENSCSAVG00000009085	-	97	65.361	ENSGGOG00000006083	PAPOLG	68	65.361	Gorilla_gorilla
ENSCSAVG00000009085	-	97	65.155	ENSHBUG00000004882	papolg	57	65.155	Haplochromis_burtoni
ENSCSAVG00000009085	-	97	65.361	ENSHGLG00000019610	PAPOLG	66	65.361	Heterocephalus_glaber_female
ENSCSAVG00000009085	-	97	65.361	ENSHGLG00100010429	PAPOLG	65	65.361	Heterocephalus_glaber_male
ENSCSAVG00000009085	-	97	64.948	ENSHCOG00000006782	papolg	59	64.948	Hippocampus_comes
ENSCSAVG00000009085	-	97	65.164	ENSIPUG00000021642	papolg	68	65.164	Ictalurus_punctatus
ENSCSAVG00000009085	-	97	65.361	ENSSTOG00000010861	PAPOLG	65	65.361	Ictidomys_tridecemlineatus
ENSCSAVG00000009085	-	82	69.458	ENSJJAG00000015601	Papolg	94	69.458	Jaculus_jaculus
ENSCSAVG00000009085	-	97	64.948	ENSKMAG00000016439	papolg	67	64.948	Kryptolebias_marmoratus
ENSCSAVG00000009085	-	97	65.155	ENSLBEG00000023218	papolg	56	65.155	Labrus_bergylta
ENSCSAVG00000009085	-	97	55.258	ENSLACG00000009543	PAPOLG	65	55.258	Latimeria_chalumnae
ENSCSAVG00000009085	-	97	65.773	ENSLOCG00000016130	papolg	64	65.773	Lepisosteus_oculatus
ENSCSAVG00000009085	-	97	65.083	ENSLAFG00000010404	PAPOLG	94	68.719	Loxodonta_africana
ENSCSAVG00000009085	-	97	65.361	ENSMFAG00000042450	PAPOLG	66	65.361	Macaca_fascicularis
ENSCSAVG00000009085	-	97	65.361	ENSMMUG00000000498	PAPOLG	66	65.361	Macaca_mulatta
ENSCSAVG00000009085	-	97	57.755	ENSMNEG00000035939	PAPOLG	64	57.755	Macaca_nemestrina
ENSCSAVG00000009085	-	97	65.361	ENSMLEG00000039462	PAPOLG	68	65.361	Mandrillus_leucophaeus
ENSCSAVG00000009085	-	97	65.155	ENSMAMG00000010667	papolg	70	65.155	Mastacembelus_armatus
ENSCSAVG00000009085	-	97	65.155	ENSMZEG00005018140	papolg	69	65.155	Maylandia_zebra
ENSCSAVG00000009085	-	97	62.112	ENSMGAG00000001741	PAPOLG	65	62.112	Meleagris_gallopavo
ENSCSAVG00000009085	-	97	65.361	ENSMAUG00000009088	Papolg	65	65.361	Mesocricetus_auratus
ENSCSAVG00000009085	-	97	65.361	ENSMICG00000010042	PAPOLG	67	65.361	Microcebus_murinus
ENSCSAVG00000009085	-	97	65.361	ENSMOCG00000006857	Papolg	65	65.361	Microtus_ochrogaster
ENSCSAVG00000009085	-	97	65.155	ENSMMOG00000008020	papolg	80	62.705	Mola_mola
ENSCSAVG00000009085	-	97	65.164	ENSMODG00000002160	PAPOLG	65	65.164	Monodelphis_domestica
ENSCSAVG00000009085	-	97	64.742	ENSMALG00000007012	papolg	58	64.742	Monopterus_albus
ENSCSAVG00000009085	-	97	65.361	MGP_CAROLIEiJ_G0016144	Papolg	94	68.719	Mus_caroli
ENSCSAVG00000009085	-	97	65.361	ENSMUSG00000020273	Papolg	94	68.719	Mus_musculus
ENSCSAVG00000009085	-	97	65.083	MGP_PahariEiJ_G0016746	Papolg	66	65.083	Mus_pahari
ENSCSAVG00000009085	-	97	65.155	MGP_SPRETEiJ_G0016987	Papolg	94	68.719	Mus_spretus
ENSCSAVG00000009085	-	97	65.155	ENSMPUG00000005165	PAPOLG	59	65.155	Mustela_putorius_furo
ENSCSAVG00000009085	-	97	65.779	ENSMLUG00000009853	PAPOLG	66	65.779	Myotis_lucifugus
ENSCSAVG00000009085	-	97	65.155	ENSNGAG00000001120	Papolg	65	65.155	Nannospalax_galili
ENSCSAVG00000009085	-	97	56.996	ENSNBRG00000011943	papolg	63	57.320	Neolamprologus_brichardi
ENSCSAVG00000009085	-	82	68.966	ENSNLEG00000009507	-	94	68.966	Nomascus_leucogenys
ENSCSAVG00000009085	-	80	52.788	ENSMEUG00000013605	-	58	52.788	Notamacropus_eugenii
ENSCSAVG00000009085	-	97	64.948	ENSOPRG00000009630	PAPOLG	65	64.948	Ochotona_princeps
ENSCSAVG00000009085	-	82	65.764	ENSODEG00000012424	PAPOLG	95	65.764	Octodon_degus
ENSCSAVG00000009085	-	97	57.819	ENSONIG00000002985	papolg	66	57.819	Oreochromis_niloticus
ENSCSAVG00000009085	-	97	64.742	ENSOANG00000012403	PAPOLG	65	64.742	Ornithorhynchus_anatinus
ENSCSAVG00000009085	-	97	65.361	ENSOCUG00000004962	PAPOLG	65	65.361	Oryctolagus_cuniculus
ENSCSAVG00000009085	-	97	64.948	ENSORLG00000001577	papolg	58	64.948	Oryzias_latipes
ENSCSAVG00000009085	-	97	64.742	ENSORLG00020002482	papolg	58	64.742	Oryzias_latipes_hni
ENSCSAVG00000009085	-	97	64.742	ENSORLG00015008836	papolg	58	64.742	Oryzias_latipes_hsok
ENSCSAVG00000009085	-	97	65.155	ENSOMEG00000001406	papolg	58	65.155	Oryzias_melastigma
ENSCSAVG00000009085	-	97	65.361	ENSOARG00000001563	PAPOLG	59	65.361	Ovis_aries
ENSCSAVG00000009085	-	97	65.361	ENSPPAG00000019917	PAPOLG	68	65.361	Pan_paniscus
ENSCSAVG00000009085	-	97	65.361	ENSPPRG00000023250	PAPOLG	65	65.361	Panthera_pardus
ENSCSAVG00000009085	-	97	65.155	ENSPTIG00000018126	PAPOLG	65	65.155	Panthera_tigris_altaica
ENSCSAVG00000009085	-	97	65.361	ENSPTRG00000011948	PAPOLG	68	65.361	Pan_troglodytes
ENSCSAVG00000009085	-	97	61.602	ENSPANG00000014543	PAPOLG	65	61.602	Papio_anubis
ENSCSAVG00000009085	-	99	63.400	ENSPKIG00000003313	papolg	70	63.400	Paramormyrops_kingsleyae
ENSCSAVG00000009085	-	97	65.155	ENSPKIG00000006027	PAPOLG	75	63.244	Paramormyrops_kingsleyae
ENSCSAVG00000009085	-	97	64.536	ENSPSIG00000013663	PAPOLG	65	64.536	Pelodiscus_sinensis
ENSCSAVG00000009085	-	97	65.361	ENSPEMG00000008960	-	66	65.361	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009085	-	97	57.676	ENSPMAG00000004864	-	95	57.676	Petromyzon_marinus
ENSCSAVG00000009085	-	97	52.200	ENSPMAG00000002961	papolg	67	52.200	Petromyzon_marinus
ENSCSAVG00000009085	-	97	64.742	ENSPCIG00000028094	PAPOLG	66	64.742	Phascolarctos_cinereus
ENSCSAVG00000009085	-	97	65.567	ENSPFOG00000012909	papolg	64	65.567	Poecilia_formosa
ENSCSAVG00000009085	-	97	65.567	ENSPLAG00000018445	papolg	57	65.567	Poecilia_latipinna
ENSCSAVG00000009085	-	97	65.567	ENSPMEG00000003961	papolg	57	65.567	Poecilia_mexicana
ENSCSAVG00000009085	-	97	65.567	ENSPREG00000010358	papolg	57	65.567	Poecilia_reticulata
ENSCSAVG00000009085	-	97	65.361	ENSPPYG00000012392	PAPOLG	66	65.361	Pongo_abelii
ENSCSAVG00000009085	-	94	64.103	ENSPCAG00000012297	PAPOLG	63	64.103	Procavia_capensis
ENSCSAVG00000009085	-	97	61.649	ENSPCOG00000027306	PAPOLG	68	61.649	Propithecus_coquereli
ENSCSAVG00000009085	-	97	63.918	ENSPVAG00000013541	PAPOLG	66	63.918	Pteropus_vampyrus
ENSCSAVG00000009085	-	97	65.155	ENSPNYG00000006729	papolg	70	65.155	Pundamilia_nyererei
ENSCSAVG00000009085	-	97	64.536	ENSPNAG00000015521	papolg	65	64.536	Pygocentrus_nattereri
ENSCSAVG00000009085	-	97	65.567	ENSRNOG00000006261	Papolg	65	65.567	Rattus_norvegicus
ENSCSAVG00000009085	-	97	60.000	ENSRBIG00000040086	PAPOLG	65	60.000	Rhinopithecus_bieti
ENSCSAVG00000009085	-	97	65.361	ENSRROG00000035954	PAPOLG	68	65.361	Rhinopithecus_roxellana
ENSCSAVG00000009085	-	97	65.361	ENSSBOG00000026194	PAPOLG	68	65.361	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009085	-	92	64.551	ENSSHAG00000014942	PAPOLG	64	64.551	Sarcophilus_harrisii
ENSCSAVG00000009085	-	97	61.237	ENSSFOG00015011874	papolg	68	61.237	Scleropages_formosus
ENSCSAVG00000009085	-	97	65.155	ENSSFOG00015002383	papolg	70	65.155	Scleropages_formosus
ENSCSAVG00000009085	-	97	64.948	ENSSMAG00000015598	papolg	59	64.948	Scophthalmus_maximus
ENSCSAVG00000009085	-	97	64.948	ENSSDUG00000000912	papolg	72	64.948	Seriola_dumerili
ENSCSAVG00000009085	-	97	64.948	ENSSLDG00000001217	papolg	67	60.288	Seriola_lalandi_dorsalis
ENSCSAVG00000009085	-	97	63.918	ENSSPUG00000007491	PAPOLG	67	63.918	Sphenodon_punctatus
ENSCSAVG00000009085	-	97	65.361	ENSSPAG00000009004	papolg	71	65.361	Stegastes_partitus
ENSCSAVG00000009085	-	97	65.361	ENSSSCG00000008389	PAPOLG	67	65.361	Sus_scrofa
ENSCSAVG00000009085	-	96	61.570	ENSTGUG00000006762	PAPOLG	89	61.570	Taeniopygia_guttata
ENSCSAVG00000009085	-	97	64.948	ENSTRUG00000006410	papolg	68	64.948	Takifugu_rubripes
ENSCSAVG00000009085	-	97	59.756	ENSTNIG00000017106	papolg	66	59.756	Tetraodon_nigroviridis
ENSCSAVG00000009085	-	97	60.000	ENSTBEG00000002609	PAPOLG	66	60.000	Tupaia_belangeri
ENSCSAVG00000009085	-	97	61.031	ENSTTRG00000006237	PAPOLG	65	61.031	Tursiops_truncatus
ENSCSAVG00000009085	-	97	65.361	ENSUAMG00000011088	PAPOLG	68	65.361	Ursus_americanus
ENSCSAVG00000009085	-	97	65.361	ENSUMAG00000019081	PAPOLG	60	65.361	Ursus_maritimus
ENSCSAVG00000009085	-	97	60.619	ENSVPAG00000000492	PAPOLG	66	60.619	Vicugna_pacos
ENSCSAVG00000009085	-	97	65.361	ENSVVUG00000010344	PAPOLG	65	65.361	Vulpes_vulpes
ENSCSAVG00000009085	-	97	64.959	ENSXETG00000002208	papolg	64	64.959	Xenopus_tropicalis
ENSCSAVG00000009085	-	97	65.226	ENSXCOG00000006611	papolg	71	65.226	Xiphophorus_couchianus
ENSCSAVG00000009085	-	97	63.655	ENSXMAG00000007383	papolg	80	63.655	Xiphophorus_maculatus