EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009111 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 7833 bases
Position: chrreftig_4:1376130-1383962
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015524	ResIII	PF04851.15	1.2e-06	1	1
ENSCSAVP00000015523	ResIII	PF04851.15	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015701	-	4573	-	ENSCSAVP00000015523	1322 (aa)	-	H2ZD57
ENSCSAVT00000015703	-	935	-	ENSCSAVP00000015525	289 (aa)	-	H2ZD59
ENSCSAVT00000015702	-	3636	-	ENSCSAVP00000015524	1212 (aa)	-	H2ZD58

Gene Model

Click here to download ENSCSAVG00000009111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009111	-	99	60.103	ENSG00000021776	AQR	92	60.103	Homo_sapiens
ENSCSAVG00000009111	-	99	60.263	ENSAPOG00000011277	aqr	97	60.896	Acanthochromis_polyacanthus
ENSCSAVG00000009111	-	99	59.897	ENSAMEG00000005194	AQR	91	59.897	Ailuropoda_melanoleuca
ENSCSAVG00000009111	-	98	59.628	ENSACIG00000015226	aqr	99	59.628	Amphilophus_citrinellus
ENSCSAVG00000009111	-	99	60.555	ENSAOCG00000018671	aqr	95	62.008	Amphiprion_ocellaris
ENSCSAVG00000009111	-	99	60.482	ENSAPEG00000015999	aqr	93	60.409	Amphiprion_percula
ENSCSAVG00000009111	-	99	59.825	ENSATEG00000010820	aqr	93	59.825	Anabas_testudineus
ENSCSAVG00000009111	-	99	59.576	ENSAPLG00000008144	AQR	99	61.266	Anas_platyrhynchos
ENSCSAVG00000009111	-	99	61.001	ENSACAG00000000687	AQR	92	61.001	Anolis_carolinensis
ENSCSAVG00000009111	-	99	59.442	ENSANAG00000035427	AQR	96	60.226	Aotus_nancymaae
ENSCSAVG00000009111	-	99	60.131	ENSACLG00000012554	aqr	92	60.131	Astatotilapia_calliptera
ENSCSAVG00000009111	-	99	60.704	ENSAMXG00000014751	aqr	99	60.704	Astyanax_mexicanus
ENSCSAVG00000009111	-	99	60.250	ENSBTAG00000012712	AQR	92	60.250	Bos_taurus
ENSCSAVG00000009111	-	99	60.103	ENSCJAG00000021021	AQR	91	60.103	Callithrix_jacchus
ENSCSAVG00000009111	-	100	58.637	ENSCAFG00020006355	AQR	97	60.090	Canis_lupus_dingo
ENSCSAVG00000009111	-	99	59.662	ENSCHIG00000025362	AQR	93	59.662	Capra_hircus
ENSCSAVG00000009111	-	99	59.368	ENSTSYG00000004244	AQR	92	67.568	Carlito_syrichta
ENSCSAVG00000009111	-	72	55.008	ENSCAPG00000016131	AQR	96	54.921	Cavia_aperea
ENSCSAVG00000009111	-	99	57.384	ENSCCAG00000018954	AQR	97	58.120	Cebus_capucinus
ENSCSAVG00000009111	-	99	60.133	ENSCATG00000040332	AQR	92	60.133	Cercocebus_atys
ENSCSAVG00000009111	-	94	75.564	ENSCLAG00000007219	AQR	96	75.564	Chinchilla_lanigera
ENSCSAVG00000009111	-	99	60.103	ENSCSAG00000007154	AQR	91	60.103	Chlorocebus_sabaeus
ENSCSAVG00000009111	-	99	60.992	ENSCPBG00000023856	AQR	93	65.734	Chrysemys_picta_bellii
ENSCSAVG00000009111	-	99	86.782	ENSCING00000003235	-	99	86.782	Ciona_intestinalis
ENSCSAVG00000009111	-	99	59.148	ENSCANG00000042952	AQR	91	59.589	Colobus_angolensis_palliatus
ENSCSAVG00000009111	-	99	60.176	ENSCGRG00001020556	Aqr	92	60.176	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009111	-	99	60.176	ENSCGRG00000007912	Aqr	92	60.176	Cricetulus_griseus_crigri
ENSCSAVG00000009111	-	99	58.591	ENSCSEG00000004847	aqr	95	61.200	Cynoglossus_semilaevis
ENSCSAVG00000009111	-	99	60.307	ENSCVAG00000003393	aqr	96	60.818	Cyprinodon_variegatus
ENSCSAVG00000009111	-	99	60.059	ENSDARG00000016775	aqr	88	60.059	Danio_rerio
ENSCSAVG00000009111	-	99	58.175	ENSDNOG00000013414	AQR	98	55.006	Dasypus_novemcinctus
ENSCSAVG00000009111	-	99	59.985	ENSDORG00000015152	Aqr	92	59.985	Dipodomys_ordii
ENSCSAVG00000009111	-	99	57.268	FBgn0051368	CG31368	92	57.341	Drosophila_melanogaster
ENSCSAVG00000009111	-	83	75.610	ENSEBUG00000015201	aqr	90	75.610	Eptatretus_burgeri
ENSCSAVG00000009111	-	99	60.250	ENSEASG00005016758	AQR	91	60.250	Equus_asinus_asinus
ENSCSAVG00000009111	-	99	60.323	ENSECAG00000016399	AQR	90	66.870	Equus_caballus
ENSCSAVG00000009111	-	95	64.602	ENSEEUG00000003975	AQR	85	64.474	Erinaceus_europaeus
ENSCSAVG00000009111	-	99	59.635	ENSELUG00000001544	aqr	92	60.668	Esox_lucius
ENSCSAVG00000009111	-	99	60.015	ENSFCAG00000014069	AQR	92	60.015	Felis_catus
ENSCSAVG00000009111	-	100	59.242	ENSFALG00000005683	AQR	93	61.897	Ficedula_albicollis
ENSCSAVG00000009111	-	99	60.029	ENSFDAG00000000252	AQR	91	60.029	Fukomys_damarensis
ENSCSAVG00000009111	-	99	60.015	ENSFHEG00000020202	aqr	97	59.763	Fundulus_heteroclitus
ENSCSAVG00000009111	-	99	60.073	ENSGMOG00000009823	aqr	93	60.029	Gadus_morhua
ENSCSAVG00000009111	-	99	60.691	ENSGALG00000009838	AQR	90	60.911	Gallus_gallus
ENSCSAVG00000009111	-	99	60.322	ENSGAFG00000019657	aqr	92	60.387	Gambusia_affinis
ENSCSAVG00000009111	-	99	59.515	ENSGACG00000010437	aqr	100	59.515	Gasterosteus_aculeatus
ENSCSAVG00000009111	-	99	61.132	ENSGAGG00000019581	AQR	93	61.132	Gopherus_agassizii
ENSCSAVG00000009111	-	100	58.546	ENSGGOG00000014073	AQR	95	61.064	Gorilla_gorilla
ENSCSAVG00000009111	-	99	60.350	ENSHBUG00000017573	aqr	93	60.770	Haplochromis_burtoni
ENSCSAVG00000009111	-	99	60.323	ENSHGLG00000013912	AQR	97	60.526	Heterocephalus_glaber_female
ENSCSAVG00000009111	-	99	60.323	ENSHGLG00100005299	AQR	97	60.526	Heterocephalus_glaber_male
ENSCSAVG00000009111	-	98	59.690	ENSHCOG00000001340	aqr	97	59.764	Hippocampus_comes
ENSCSAVG00000009111	-	99	60.044	ENSIPUG00000006431	aqr	91	61.327	Ictalurus_punctatus
ENSCSAVG00000009111	-	99	60.000	ENSSTOG00000024444	AQR	96	60.196	Ictidomys_tridecemlineatus
ENSCSAVG00000009111	-	99	59.545	ENSJJAG00000018777	Aqr	92	59.515	Jaculus_jaculus
ENSCSAVG00000009111	-	99	60.088	ENSKMAG00000011179	aqr	93	60.015	Kryptolebias_marmoratus
ENSCSAVG00000009111	-	99	60.278	ENSLBEG00000028346	aqr	98	62.215	Labrus_bergylta
ENSCSAVG00000009111	-	99	61.132	ENSLACG00000012039	AQR	93	61.132	Latimeria_chalumnae
ENSCSAVG00000009111	-	99	60.219	ENSLOCG00000012184	aqr	93	60.219	Lepisosteus_oculatus
ENSCSAVG00000009111	-	99	59.853	ENSLAFG00000017667	AQR	91	59.853	Loxodonta_africana
ENSCSAVG00000009111	-	99	59.587	ENSMFAG00000030453	AQR	84	68.684	Macaca_fascicularis
ENSCSAVG00000009111	-	99	60.103	ENSMMUG00000002337	AQR	92	59.515	Macaca_mulatta
ENSCSAVG00000009111	-	100	58.346	ENSMNEG00000031809	AQR	92	60.693	Macaca_nemestrina
ENSCSAVG00000009111	-	99	59.515	ENSMLEG00000043611	AQR	91	59.515	Mandrillus_leucophaeus
ENSCSAVG00000009111	-	99	60.190	ENSMAMG00000005722	aqr	96	60.856	Mastacembelus_armatus
ENSCSAVG00000009111	-	99	60.277	ENSMZEG00005002419	aqr	93	60.277	Maylandia_zebra
ENSCSAVG00000009111	-	99	58.504	ENSMGAG00000012303	AQR	96	58.504	Meleagris_gallopavo
ENSCSAVG00000009111	-	87	60.018	ENSMAUG00000021062	Aqr	87	62.566	Mesocricetus_auratus
ENSCSAVG00000009111	-	99	60.029	ENSMICG00000016979	AQR	92	59.442	Microcebus_murinus
ENSCSAVG00000009111	-	99	59.221	ENSMOCG00000001431	Aqr	97	59.865	Microtus_ochrogaster
ENSCSAVG00000009111	-	100	56.804	ENSMMOG00000009958	aqr	91	59.332	Mola_mola
ENSCSAVG00000009111	-	99	60.132	ENSMODG00000001369	AQR	92	60.382	Monodelphis_domestica
ENSCSAVG00000009111	-	98	56.136	ENSMALG00000016665	aqr	96	57.619	Monopterus_albus
ENSCSAVG00000009111	-	99	59.956	MGP_CAROLIEiJ_G0024103	Aqr	95	60.509	Mus_caroli
ENSCSAVG00000009111	-	99	59.780	ENSMUSG00000040383	Aqr	96	60.328	Mus_musculus
ENSCSAVG00000009111	-	99	59.882	MGP_PahariEiJ_G0025546	Aqr	95	60.540	Mus_pahari
ENSCSAVG00000009111	-	99	59.956	MGP_SPRETEiJ_G0025019	Aqr	96	60.509	Mus_spretus
ENSCSAVG00000009111	-	99	60.103	ENSMPUG00000008166	AQR	91	60.103	Mustela_putorius_furo
ENSCSAVG00000009111	-	99	60.250	ENSMLUG00000006223	AQR	91	60.250	Myotis_lucifugus
ENSCSAVG00000009111	-	100	58.546	ENSNGAG00000017515	Aqr	92	59.442	Nannospalax_galili
ENSCSAVG00000009111	-	98	60.938	ENSNBRG00000023535	aqr	97	60.938	Neolamprologus_brichardi
ENSCSAVG00000009111	-	99	60.029	ENSNLEG00000011180	AQR	92	60.029	Nomascus_leucogenys
ENSCSAVG00000009111	-	76	58.605	ENSMEUG00000011715	AQR	76	58.605	Notamacropus_eugenii
ENSCSAVG00000009111	-	80	66.324	ENSOPRG00000016495	AQR	74	66.324	Ochotona_princeps
ENSCSAVG00000009111	-	99	60.350	ENSONIG00000001395	aqr	93	60.350	Oreochromis_niloticus
ENSCSAVG00000009111	-	99	60.029	ENSOCUG00000003488	AQR	91	60.029	Oryctolagus_cuniculus
ENSCSAVG00000009111	-	99	59.735	ENSORLG00000013184	aqr	99	60.617	Oryzias_latipes
ENSCSAVG00000009111	-	99	59.662	ENSORLG00020017700	aqr	93	60.542	Oryzias_latipes_hni
ENSCSAVG00000009111	-	99	59.384	ENSORLG00015000439	aqr	99	58.100	Oryzias_latipes_hsok
ENSCSAVG00000009111	-	99	59.868	ENSOMEG00000014207	aqr	98	59.839	Oryzias_melastigma
ENSCSAVG00000009111	-	99	58.218	ENSOGAG00000016007	AQR	91	58.218	Otolemur_garnettii
ENSCSAVG00000009111	-	99	60.323	ENSOARG00000020005	AQR	92	60.323	Ovis_aries
ENSCSAVG00000009111	-	99	60.103	ENSPPAG00000030601	AQR	92	60.103	Pan_paniscus
ENSCSAVG00000009111	-	99	60.015	ENSPPRG00000008641	AQR	92	60.015	Panthera_pardus
ENSCSAVG00000009111	-	99	60.015	ENSPTIG00000018387	AQR	92	60.015	Panthera_tigris_altaica
ENSCSAVG00000009111	-	99	60.103	ENSPTRG00000006891	AQR	97	60.301	Pan_troglodytes
ENSCSAVG00000009111	-	99	60.176	ENSPANG00000019671	AQR	91	60.176	Papio_anubis
ENSCSAVG00000009111	-	98	59.438	ENSPKIG00000003825	aqr	99	60.863	Paramormyrops_kingsleyae
ENSCSAVG00000009111	-	99	61.144	ENSPSIG00000007656	AQR	92	61.290	Pelodiscus_sinensis
ENSCSAVG00000009111	-	98	60.896	ENSPMGG00000000136	aqr	93	60.672	Periophthalmus_magnuspinnatus
ENSCSAVG00000009111	-	99	57.448	ENSPEMG00000016395	Aqr	92	57.448	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009111	-	99	60.822	ENSPCIG00000021761	AQR	88	60.822	Phascolarctos_cinereus
ENSCSAVG00000009111	-	99	60.469	ENSPFOG00000015147	aqr	93	60.469	Poecilia_formosa
ENSCSAVG00000009111	-	99	60.469	ENSPLAG00000021235	aqr	97	61.608	Poecilia_latipinna
ENSCSAVG00000009111	-	99	60.469	ENSPMEG00000004188	aqr	97	61.585	Poecilia_mexicana
ENSCSAVG00000009111	-	98	59.620	ENSPREG00000007197	aqr	96	62.264	Poecilia_reticulata
ENSCSAVG00000009111	-	99	60.073	ENSPPYG00000006319	AQR	92	60.073	Pongo_abelii
ENSCSAVG00000009111	-	99	54.693	ENSPCOG00000021390	AQR	90	54.841	Propithecus_coquereli
ENSCSAVG00000009111	-	99	60.277	ENSPNYG00000016598	aqr	98	60.834	Pundamilia_nyererei
ENSCSAVG00000009111	-	98	59.492	ENSPNAG00000001173	aqr	97	62.452	Pygocentrus_nattereri
ENSCSAVG00000009111	-	99	59.956	ENSRNOG00000008912	Aqr	92	59.956	Rattus_norvegicus
ENSCSAVG00000009111	-	99	59.325	ENSRBIG00000038017	AQR	97	60.105	Rhinopithecus_bieti
ENSCSAVG00000009111	-	99	60.103	ENSRROG00000044173	AQR	91	60.103	Rhinopithecus_roxellana
ENSCSAVG00000009111	-	99	60.103	ENSSBOG00000000986	AQR	91	60.103	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009111	-	99	60.630	ENSSHAG00000016987	AQR	92	60.777	Sarcophilus_harrisii
ENSCSAVG00000009111	-	99	60.132	ENSSFOG00015010484	aqr	96	62.205	Scleropages_formosus
ENSCSAVG00000009111	-	99	59.766	ENSSMAG00000018736	aqr	93	59.766	Scophthalmus_maximus
ENSCSAVG00000009111	-	99	60.132	ENSSDUG00000015005	aqr	96	61.364	Seriola_dumerili
ENSCSAVG00000009111	-	96	61.381	ENSSLDG00000021156	aqr	97	61.305	Seriola_lalandi_dorsalis
ENSCSAVG00000009111	-	52	69.789	ENSSPUG00000008373	-	89	69.834	Sphenodon_punctatus
ENSCSAVG00000009111	-	99	60.482	ENSSPAG00000015693	aqr	96	61.065	Stegastes_partitus
ENSCSAVG00000009111	-	99	60.250	ENSSSCG00000004802	AQR	91	60.250	Sus_scrofa
ENSCSAVG00000009111	-	99	60.484	ENSTGUG00000011770	AQR	96	60.484	Taeniopygia_guttata
ENSCSAVG00000009111	-	99	59.825	ENSTRUG00000014255	aqr	93	59.825	Takifugu_rubripes
ENSCSAVG00000009111	-	99	59.883	ENSTNIG00000017238	aqr	93	60.029	Tetraodon_nigroviridis
ENSCSAVG00000009111	-	99	59.442	ENSTTRG00000014800	AQR	91	59.442	Tursiops_truncatus
ENSCSAVG00000009111	-	100	58.682	ENSUAMG00000015052	AQR	92	61.838	Ursus_americanus
ENSCSAVG00000009111	-	99	60.029	ENSUMAG00000015725	AQR	91	60.029	Ursus_maritimus
ENSCSAVG00000009111	-	99	59.956	ENSVPAG00000010622	AQR	92	59.956	Vicugna_pacos
ENSCSAVG00000009111	-	99	60.029	ENSVVUG00000026312	AQR	92	60.029	Vulpes_vulpes
ENSCSAVG00000009111	-	100	58.199	ENSXETG00000012901	aqr	90	60.840	Xenopus_tropicalis
ENSCSAVG00000009111	-	99	60.395	ENSXMAG00000009596	aqr	93	60.395	Xiphophorus_maculatus