EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009116 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2655 bases
Position: chrreftig_14:8394-11048
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015531	DEAD	PF00270.29	3.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015709	-	1626	-	ENSCSAVP00000015531	474 (aa)	-	H2ZD65

Gene Model

Click here to download ENSCSAVG00000009116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009116	-	77	38.587	ENSCSAVG00000009920	-	97	38.587
ENSCSAVG00000009116	-	70	30.086	ENSCSAVG00000002353	-	75	30.100
ENSCSAVG00000009116	-	79	31.217	ENSCSAVG00000003045	-	92	31.217
ENSCSAVG00000009116	-	78	41.333	ENSCSAVG00000000630	-	97	41.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009116	-	88	60.526	ENSG00000109832	DDX25	99	61.580	Homo_sapiens
ENSCSAVG00000009116	-	96	56.304	ENSAMEG00000000138	DDX25	94	56.304	Ailuropoda_melanoleuca
ENSCSAVG00000009116	-	76	53.719	ENSAPLG00000007485	-	99	53.719	Anas_platyrhynchos
ENSCSAVG00000009116	-	88	55.213	ENSACAG00000000173	DDX25	86	55.213	Anolis_carolinensis
ENSCSAVG00000009116	-	88	60.526	ENSANAG00000030502	DDX25	89	60.526	Aotus_nancymaae
ENSCSAVG00000009116	-	88	61.244	ENSBTAG00000004266	DDX25	93	57.871	Bos_taurus
ENSCSAVG00000009116	-	87	60.671	ENSCJAG00000008600	DDX25	86	60.671	Callithrix_jacchus
ENSCSAVG00000009116	-	87	61.151	ENSCAFG00000010519	DDX25	99	62.295	Canis_familiaris
ENSCSAVG00000009116	-	87	61.391	ENSCAFG00020010651	DDX25	87	61.391	Canis_lupus_dingo
ENSCSAVG00000009116	-	88	61.244	ENSCHIG00000014324	-	89	61.244	Capra_hircus
ENSCSAVG00000009116	-	88	61.722	ENSTSYG00000014746	DDX25	87	61.722	Carlito_syrichta
ENSCSAVG00000009116	-	92	57.500	ENSCAPG00000015352	DDX25	94	57.500	Cavia_aperea
ENSCSAVG00000009116	-	88	59.809	ENSCPOG00000011456	DDX25	90	59.039	Cavia_porcellus
ENSCSAVG00000009116	-	88	60.526	ENSCCAG00000027629	DDX25	86	60.526	Cebus_capucinus
ENSCSAVG00000009116	-	88	60.766	ENSCATG00000042562	DDX25	90	57.684	Cercocebus_atys
ENSCSAVG00000009116	-	88	60.766	ENSCLAG00000015793	DDX25	86	60.766	Chinchilla_lanigera
ENSCSAVG00000009116	-	88	60.766	ENSCSAG00000002279	DDX25	92	58.296	Chlorocebus_sabaeus
ENSCSAVG00000009116	-	84	61.940	ENSCPBG00000011165	DDX25	92	61.940	Chrysemys_picta_bellii
ENSCSAVG00000009116	-	100	79.876	ENSCING00000007756	-	99	79.876	Ciona_intestinalis
ENSCSAVG00000009116	-	88	60.766	ENSCANG00000028422	DDX25	90	57.684	Colobus_angolensis_palliatus
ENSCSAVG00000009116	-	88	60.526	ENSCGRG00001021499	Ddx25	86	60.526	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009116	-	88	60.526	ENSCGRG00000009695	Ddx25	86	60.526	Cricetulus_griseus_crigri
ENSCSAVG00000009116	-	88	61.005	ENSDNOG00000007989	DDX25	87	61.005	Dasypus_novemcinctus
ENSCSAVG00000009116	-	88	60.526	ENSDORG00000001822	Ddx25	89	58.891	Dipodomys_ordii
ENSCSAVG00000009116	-	88	60.766	ENSEASG00005023001	DDX25	89	59.535	Equus_asinus_asinus
ENSCSAVG00000009116	-	88	60.766	ENSECAG00000009643	DDX25	89	59.535	Equus_caballus
ENSCSAVG00000009116	-	94	56.889	ENSEEUG00000010847	DDX25	97	56.444	Erinaceus_europaeus
ENSCSAVG00000009116	-	88	61.244	ENSFCAG00000005341	DDX25	93	57.333	Felis_catus
ENSCSAVG00000009116	-	87	55.422	ENSFALG00000005149	DDX25	99	55.422	Ficedula_albicollis
ENSCSAVG00000009116	-	88	60.287	ENSFDAG00000018479	DDX25	87	60.287	Fukomys_damarensis
ENSCSAVG00000009116	-	88	56.563	ENSGALG00000039863	DDX25	85	55.093	Gallus_gallus
ENSCSAVG00000009116	-	84	62.189	ENSGAGG00000015750	DDX25	96	62.438	Gopherus_agassizii
ENSCSAVG00000009116	-	94	57.461	ENSGGOG00000015054	DDX25	90	57.461	Gorilla_gorilla
ENSCSAVG00000009116	-	88	60.287	ENSHGLG00000000748	DDX25	88	60.287	Heterocephalus_glaber_female
ENSCSAVG00000009116	-	88	60.287	ENSHGLG00100010209	DDX25	88	60.287	Heterocephalus_glaber_male
ENSCSAVG00000009116	-	88	60.526	ENSSTOG00000003749	DDX25	93	56.889	Ictidomys_tridecemlineatus
ENSCSAVG00000009116	-	88	60.048	ENSJJAG00000012739	Ddx25	87	60.048	Jaculus_jaculus
ENSCSAVG00000009116	-	99	50.104	ENSLACG00000017651	DDX25	99	49.687	Latimeria_chalumnae
ENSCSAVG00000009116	-	88	61.244	ENSLAFG00000000532	DDX25	93	57.650	Loxodonta_africana
ENSCSAVG00000009116	-	94	57.684	ENSMFAG00000040048	DDX25	89	60.526	Macaca_fascicularis
ENSCSAVG00000009116	-	94	57.684	ENSMMUG00000007624	DDX25	88	60.526	Macaca_mulatta
ENSCSAVG00000009116	-	94	57.906	ENSMNEG00000034512	DDX25	89	60.766	Macaca_nemestrina
ENSCSAVG00000009116	-	88	60.766	ENSMLEG00000041703	DDX25	90	57.684	Mandrillus_leucophaeus
ENSCSAVG00000009116	-	57	59.191	ENSMGAG00000008093	-	98	59.191	Meleagris_gallopavo
ENSCSAVG00000009116	-	88	60.526	ENSMAUG00000012406	Ddx25	86	60.526	Mesocricetus_auratus
ENSCSAVG00000009116	-	88	61.244	ENSMICG00000004073	DDX25	93	57.778	Microcebus_murinus
ENSCSAVG00000009116	-	88	60.287	ENSMOCG00000002484	Ddx25	93	56.319	Microtus_ochrogaster
ENSCSAVG00000009116	-	88	60.287	ENSMODG00000004275	DDX25	98	55.297	Monodelphis_domestica
ENSCSAVG00000009116	-	88	60.287	MGP_CAROLIEiJ_G0031956	Ddx25	86	60.287	Mus_caroli
ENSCSAVG00000009116	-	88	60.287	ENSMUSG00000032101	Ddx25	86	60.287	Mus_musculus
ENSCSAVG00000009116	-	88	60.526	MGP_PahariEiJ_G0014821	Ddx25	86	60.526	Mus_pahari
ENSCSAVG00000009116	-	88	60.287	MGP_SPRETEiJ_G0033080	Ddx25	86	60.287	Mus_spretus
ENSCSAVG00000009116	-	94	57.778	ENSMPUG00000006577	DDX25	89	57.778	Mustela_putorius_furo
ENSCSAVG00000009116	-	88	47.196	ENSMLUG00000008700	DDX25	86	47.196	Myotis_lucifugus
ENSCSAVG00000009116	-	88	61.098	ENSNGAG00000006246	Ddx25	87	60.621	Nannospalax_galili
ENSCSAVG00000009116	-	88	60.526	ENSNLEG00000007461	DDX25	86	60.526	Nomascus_leucogenys
ENSCSAVG00000009116	-	88	54.785	ENSMEUG00000000296	DDX25	87	54.785	Notamacropus_eugenii
ENSCSAVG00000009116	-	86	61.594	ENSOPRG00000002090	-	92	61.594	Ochotona_princeps
ENSCSAVG00000009116	-	88	61.005	ENSODEG00000004301	DDX25	92	57.848	Octodon_degus
ENSCSAVG00000009116	-	88	60.048	ENSOANG00000012968	DDX25	93	60.048	Ornithorhynchus_anatinus
ENSCSAVG00000009116	-	95	57.582	ENSOCUG00000004476	DDX25	93	57.582	Oryctolagus_cuniculus
ENSCSAVG00000009116	-	88	61.244	ENSOGAG00000013409	DDX25	89	60.000	Otolemur_garnettii
ENSCSAVG00000009116	-	88	60.621	ENSOARG00000011935	DDX25	86	61.098	Ovis_aries
ENSCSAVG00000009116	-	88	60.526	ENSPPAG00000027196	DDX25	77	70.395	Pan_paniscus
ENSCSAVG00000009116	-	88	61.244	ENSPPRG00000005392	DDX25	87	60.766	Panthera_pardus
ENSCSAVG00000009116	-	77	62.125	ENSPTIG00000018953	DDX25	99	62.125	Panthera_tigris_altaica
ENSCSAVG00000009116	-	88	60.526	ENSPTRG00000004450	DDX25	88	60.526	Pan_troglodytes
ENSCSAVG00000009116	-	88	60.766	ENSPANG00000005372	DDX25	89	60.766	Papio_anubis
ENSCSAVG00000009116	-	88	59.905	ENSPSIG00000012606	DDX25	98	59.905	Pelodiscus_sinensis
ENSCSAVG00000009116	-	88	60.766	ENSPEMG00000009334	Ddx25	86	60.766	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009116	-	88	60.048	ENSPCIG00000010222	DDX25	90	58.430	Phascolarctos_cinereus
ENSCSAVG00000009116	-	94	57.461	ENSPPYG00000004041	DDX25	90	57.461	Pongo_abelii
ENSCSAVG00000009116	-	76	61.484	ENSPCAG00000000455	DDX25	75	61.484	Procavia_capensis
ENSCSAVG00000009116	-	90	59.907	ENSPCOG00000016873	DDX25	89	59.907	Propithecus_coquereli
ENSCSAVG00000009116	-	65	58.466	ENSPVAG00000014265	DDX25	99	58.466	Pteropus_vampyrus
ENSCSAVG00000009116	-	88	60.766	ENSRNOG00000012260	Ddx25	86	60.287	Rattus_norvegicus
ENSCSAVG00000009116	-	88	60.766	ENSRBIG00000034284	DDX25	89	60.766	Rhinopithecus_bieti
ENSCSAVG00000009116	-	88	60.766	ENSRROG00000033468	DDX25	89	60.766	Rhinopithecus_roxellana
ENSCSAVG00000009116	-	88	60.766	ENSSBOG00000010854	DDX25	86	60.766	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009116	-	88	60.287	ENSSHAG00000002011	DDX25	89	58.796	Sarcophilus_harrisii
ENSCSAVG00000009116	-	84	55.112	ENSSARG00000013832	DDX25	99	55.112	Sorex_araneus
ENSCSAVG00000009116	-	88	58.711	ENSSPUG00000001492	DDX25	85	65.942	Sphenodon_punctatus
ENSCSAVG00000009116	-	88	60.526	ENSSSCG00000015223	DDX25	99	61.853	Sus_scrofa
ENSCSAVG00000009116	-	88	55.024	ENSTGUG00000000780	DDX25	98	55.024	Taeniopygia_guttata
ENSCSAVG00000009116	-	87	54.676	ENSTTRG00000012183	DDX25	86	54.676	Tursiops_truncatus
ENSCSAVG00000009116	-	88	60.526	ENSUMAG00000001803	DDX25	86	60.526	Ursus_maritimus
ENSCSAVG00000009116	-	91	46.651	ENSVPAG00000001505	DDX25	98	46.651	Vicugna_pacos
ENSCSAVG00000009116	-	88	61.244	ENSVVUG00000020142	DDX25	88	60.766	Vulpes_vulpes
ENSCSAVG00000009116	-	87	54.545	ENSXETG00000000026	ddx25	87	54.545	Xenopus_tropicalis