EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009128 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 9111 bases
Position: chrreftig_2:2550272-2559382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015544	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015722	-	1304	-	ENSCSAVP00000015544	209 (aa)	-	H2ZD78

Gene Model

Click here to download ENSCSAVG00000009128's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009128's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009128	-	93	30.653	ENSCSAVG00000006042	-	91	30.653
ENSCSAVG00000009128	-	75	35.329	ENSCSAVG00000005689	-	77	35.329
ENSCSAVG00000009128	-	79	43.605	ENSCSAVG00000000613	-	87	44.366
ENSCSAVG00000009128	-	74	47.134	ENSCSAVG00000008684	-	75	47.134
ENSCSAVG00000009128	-	91	36.126	ENSCSAVG00000000160	-	88	36.126
ENSCSAVG00000009128	-	89	31.122	ENSCSAVG00000005120	-	87	31.884
ENSCSAVG00000009128	-	76	38.650	ENSCSAVG00000011162	-	79	38.650
ENSCSAVG00000009128	-	74	38.710	ENSCSAVG00000010245	-	55	38.710
ENSCSAVG00000009128	-	75	32.075	ENSCSAVG00000005450	-	71	31.447
ENSCSAVG00000009128	-	75	42.038	ENSCSAVG00000001356	-	65	42.038
ENSCSAVG00000009128	-	78	37.952	ENSCSAVG00000007813	-	63	37.952
ENSCSAVG00000009128	-	83	40.782	ENSCSAVG00000009147	-	88	40.782
ENSCSAVG00000009128	-	73	39.216	ENSCSAVG00000008995	-	95	39.216
ENSCSAVG00000009128	-	98	39.713	ENSCSAVG00000010348	-	99	39.713
ENSCSAVG00000009128	-	76	42.405	ENSCSAVG00000002088	-	74	42.405
ENSCSAVG00000009128	-	81	34.884	ENSCSAVG00000009503	-	87	34.884
ENSCSAVG00000009128	-	95	35.122	ENSCSAVG00000002804	-	93	35.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009128	-	99	87.864	ENSG00000175582	RAB6A	96	96.552	Homo_sapiens
ENSCSAVG00000009128	-	99	84.466	ENSAPOG00000005731	rab6a	96	84.466	Acanthochromis_polyacanthus
ENSCSAVG00000009128	-	99	86.408	ENSAMEG00000017285	RAB6A	80	86.408	Ailuropoda_melanoleuca
ENSCSAVG00000009128	-	99	85.437	ENSACIG00000014605	rab6a	98	85.437	Amphilophus_citrinellus
ENSCSAVG00000009128	-	99	85.096	ENSAOCG00000012277	-	99	85.096	Amphiprion_ocellaris
ENSCSAVG00000009128	-	99	84.689	ENSATEG00000012459	-	99	84.689	Anabas_testudineus
ENSCSAVG00000009128	-	99	84.466	ENSATEG00000015992	rab41	96	84.466	Anabas_testudineus
ENSCSAVG00000009128	-	99	82.039	ENSACAG00000015304	-	95	81.643	Anolis_carolinensis
ENSCSAVG00000009128	-	99	87.440	ENSANAG00000036364	RAB6A	98	87.440	Aotus_nancymaae
ENSCSAVG00000009128	-	99	84.466	ENSACLG00000019423	rab41	96	84.466	Astatotilapia_calliptera
ENSCSAVG00000009128	-	77	92.547	ENSAMXG00000033216	rab41	82	92.547	Astyanax_mexicanus
ENSCSAVG00000009128	-	99	86.538	ENSAMXG00000032547	rab6a	99	86.538	Astyanax_mexicanus
ENSCSAVG00000009128	-	99	87.440	ENSBTAG00000000025	RAB6A	98	87.440	Bos_taurus
ENSCSAVG00000009128	-	99	73.810	WBGene00004269	rab-6.1	99	73.810	Caenorhabditis_elegans
ENSCSAVG00000009128	-	99	87.440	ENSCJAG00000039039	RAB6A	98	87.440	Callithrix_jacchus
ENSCSAVG00000009128	-	99	85.922	ENSCAFG00000028870	RAB6A	98	85.922	Canis_familiaris
ENSCSAVG00000009128	-	99	87.440	ENSCAFG00020002206	RAB6A	98	87.440	Canis_lupus_dingo
ENSCSAVG00000009128	-	99	87.440	ENSCHIG00000023957	RAB6A	98	87.440	Capra_hircus
ENSCSAVG00000009128	-	99	86.957	ENSTSYG00000013951	RAB6A	98	86.957	Carlito_syrichta
ENSCSAVG00000009128	-	99	87.440	ENSCATG00000012428	RAB6A	98	87.440	Cercocebus_atys
ENSCSAVG00000009128	-	99	86.957	ENSCLAG00000015536	RAB6A	98	86.957	Chinchilla_lanigera
ENSCSAVG00000009128	-	99	87.440	ENSCSAG00000004062	RAB6A	98	87.440	Chlorocebus_sabaeus
ENSCSAVG00000009128	-	99	76.329	ENSCHOG00000000992	RAB6A	98	76.329	Choloepus_hoffmanni
ENSCSAVG00000009128	-	99	88.350	ENSCPBG00000000041	RAB6A	98	88.350	Chrysemys_picta_bellii
ENSCSAVG00000009128	-	100	100.000	ENSCING00000002960	-	100	100.000	Ciona_intestinalis
ENSCSAVG00000009128	-	99	87.440	ENSCANG00000029094	RAB6A	98	87.440	Colobus_angolensis_palliatus
ENSCSAVG00000009128	-	99	87.440	ENSCGRG00001018153	Rab6a	98	87.440	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009128	-	99	83.495	ENSCSEG00000004941	rab41	96	83.495	Cynoglossus_semilaevis
ENSCSAVG00000009128	-	99	84.615	ENSCVAG00000022249	rab6a	99	84.615	Cyprinodon_variegatus
ENSCSAVG00000009128	-	99	84.466	ENSCVAG00000001618	rab41	96	84.466	Cyprinodon_variegatus
ENSCSAVG00000009128	-	99	86.538	ENSDARG00000103714	rab6a	99	86.538	Danio_rerio
ENSCSAVG00000009128	-	99	84.466	ENSDARG00000029885	rab41	96	84.466	Danio_rerio
ENSCSAVG00000009128	-	99	87.440	ENSDNOG00000042746	RAB6A	98	87.440	Dasypus_novemcinctus
ENSCSAVG00000009128	-	99	86.957	ENSDORG00000027784	Rab6a	98	86.957	Dipodomys_ordii
ENSCSAVG00000009128	-	99	86.058	FBgn0015797	Rab6	99	86.058	Drosophila_melanogaster
ENSCSAVG00000009128	-	62	97.674	ENSETEG00000009412	-	62	97.674	Echinops_telfairi
ENSCSAVG00000009128	-	99	87.440	ENSEASG00005017944	RAB6A	98	87.440	Equus_asinus_asinus
ENSCSAVG00000009128	-	99	87.440	ENSECAG00000022694	-	98	87.440	Equus_caballus
ENSCSAVG00000009128	-	99	84.615	ENSELUG00000008876	rab6a	99	84.615	Esox_lucius
ENSCSAVG00000009128	-	99	87.440	ENSFCAG00000023834	RAB6A	98	87.440	Felis_catus
ENSCSAVG00000009128	-	99	86.893	ENSFALG00000008011	RAB6A	98	86.893	Ficedula_albicollis
ENSCSAVG00000009128	-	99	86.957	ENSFDAG00000010948	-	98	86.957	Fukomys_damarensis
ENSCSAVG00000009128	-	99	82.039	ENSGMOG00000004095	rab41	96	82.039	Gadus_morhua
ENSCSAVG00000009128	-	99	86.893	ENSGALG00000017320	RAB6A	98	86.893	Gallus_gallus
ENSCSAVG00000009128	-	99	84.951	ENSGALG00000026278	-	96	84.951	Gallus_gallus
ENSCSAVG00000009128	-	99	84.615	ENSGAFG00000006356	rab6a	99	84.615	Gambusia_affinis
ENSCSAVG00000009128	-	99	84.466	ENSGAFG00000019872	rab41	96	84.466	Gambusia_affinis
ENSCSAVG00000009128	-	99	84.466	ENSGACG00000017153	rab41	96	84.466	Gasterosteus_aculeatus
ENSCSAVG00000009128	-	99	84.689	ENSGACG00000020356	rab6a	99	84.689	Gasterosteus_aculeatus
ENSCSAVG00000009128	-	99	88.350	ENSGAGG00000021701	RAB6A	98	88.350	Gopherus_agassizii
ENSCSAVG00000009128	-	99	87.864	ENSGGOG00000010610	RAB6A	98	87.864	Gorilla_gorilla
ENSCSAVG00000009128	-	99	85.922	ENSHBUG00000000890	rab6a	98	85.922	Haplochromis_burtoni
ENSCSAVG00000009128	-	99	86.957	ENSHGLG00000008829	-	98	86.957	Heterocephalus_glaber_female
ENSCSAVG00000009128	-	99	85.990	ENSHGLG00100014550	-	98	85.990	Heterocephalus_glaber_male
ENSCSAVG00000009128	-	99	83.495	ENSHCOG00000004404	rab41	96	83.495	Hippocampus_comes
ENSCSAVG00000009128	-	99	84.135	ENSHCOG00000006550	-	99	84.135	Hippocampus_comes
ENSCSAVG00000009128	-	99	83.495	ENSIPUG00000019382	rab41	96	83.495	Ictalurus_punctatus
ENSCSAVG00000009128	-	99	88.350	ENSIPUG00000021740	rab6a	98	88.350	Ictalurus_punctatus
ENSCSAVG00000009128	-	99	87.440	ENSSTOG00000023497	RAB6A	98	87.440	Ictidomys_tridecemlineatus
ENSCSAVG00000009128	-	77	96.273	ENSKMAG00000013146	-	84	96.273	Kryptolebias_marmoratus
ENSCSAVG00000009128	-	99	84.135	ENSLBEG00000003748	rab6a	99	84.135	Labrus_bergylta
ENSCSAVG00000009128	-	99	84.951	ENSLACG00000013980	rab41	96	84.951	Latimeria_chalumnae
ENSCSAVG00000009128	-	99	83.010	ENSLACG00000005168	RAB6A	98	83.010	Latimeria_chalumnae
ENSCSAVG00000009128	-	99	83.010	ENSLOCG00000015191	rab41	96	83.010	Lepisosteus_oculatus
ENSCSAVG00000009128	-	99	87.440	ENSMFAG00000041027	RAB6A	98	87.440	Macaca_fascicularis
ENSCSAVG00000009128	-	99	87.440	ENSMNEG00000029216	RAB6A	98	87.440	Macaca_nemestrina
ENSCSAVG00000009128	-	99	87.440	ENSMLEG00000038771	RAB6A	98	87.440	Mandrillus_leucophaeus
ENSCSAVG00000009128	-	99	82.524	ENSMAMG00000020859	rab41	96	82.524	Mastacembelus_armatus
ENSCSAVG00000009128	-	99	84.615	ENSMAMG00000012488	rab6a	99	84.615	Mastacembelus_armatus
ENSCSAVG00000009128	-	99	85.922	ENSMZEG00005023181	rab6a	98	85.922	Maylandia_zebra
ENSCSAVG00000009128	-	99	87.440	ENSMICG00000031565	RAB6A	98	87.440	Microcebus_murinus
ENSCSAVG00000009128	-	99	87.440	ENSMOCG00000014387	Rab6a	98	87.440	Microtus_ochrogaster
ENSCSAVG00000009128	-	98	82.353	ENSMMOG00000001992	rab41	92	82.353	Mola_mola
ENSCSAVG00000009128	-	99	81.731	ENSMMOG00000016209	rab6a	98	81.731	Mola_mola
ENSCSAVG00000009128	-	99	87.440	ENSMODG00000007600	RAB6A	98	87.440	Monodelphis_domestica
ENSCSAVG00000009128	-	99	84.135	ENSMALG00000020364	-	99	84.135	Monopterus_albus
ENSCSAVG00000009128	-	99	83.981	ENSMALG00000010549	rab41	96	83.981	Monopterus_albus
ENSCSAVG00000009128	-	99	86.957	MGP_CAROLIEiJ_G0030051	Rab6a	98	86.957	Mus_caroli
ENSCSAVG00000009128	-	99	86.957	ENSMUSG00000030704	Rab6a	98	86.957	Mus_musculus
ENSCSAVG00000009128	-	99	86.957	MGP_PahariEiJ_G0013273	Rab6a	98	86.957	Mus_pahari
ENSCSAVG00000009128	-	99	86.957	MGP_SPRETEiJ_G0031162	Rab6a	98	86.957	Mus_spretus
ENSCSAVG00000009128	-	99	87.440	ENSMPUG00000009724	RAB6A	98	87.440	Mustela_putorius_furo
ENSCSAVG00000009128	-	99	86.957	ENSNGAG00000014566	Rab6a	98	86.957	Nannospalax_galili
ENSCSAVG00000009128	-	99	85.922	ENSNBRG00000016716	rab6a	98	85.922	Neolamprologus_brichardi
ENSCSAVG00000009128	-	99	83.981	ENSNBRG00000022702	rab41	96	83.981	Neolamprologus_brichardi
ENSCSAVG00000009128	-	99	87.440	ENSNLEG00000017098	RAB6A	98	87.440	Nomascus_leucogenys
ENSCSAVG00000009128	-	99	87.440	ENSMEUG00000010026	RAB6A	98	87.440	Notamacropus_eugenii
ENSCSAVG00000009128	-	88	92.350	ENSOPRG00000010355	RAB6A	97	92.350	Ochotona_princeps
ENSCSAVG00000009128	-	99	86.957	ENSODEG00000005942	RAB6A	98	86.957	Octodon_degus
ENSCSAVG00000009128	-	99	85.922	ENSONIG00000004394	rab6a	98	85.922	Oreochromis_niloticus
ENSCSAVG00000009128	-	99	86.408	ENSOCUG00000009297	RAB6A	98	86.408	Oryctolagus_cuniculus
ENSCSAVG00000009128	-	100	83.333	ENSORLG00000000937	-	99	83.333	Oryzias_latipes
ENSCSAVG00000009128	-	99	85.167	ENSORLG00000026197	rab6a	99	85.167	Oryzias_latipes
ENSCSAVG00000009128	-	99	85.167	ENSORLG00020001816	rab6a	92	92.857	Oryzias_latipes_hni
ENSCSAVG00000009128	-	99	83.010	ENSORLG00020000604	rab41	96	83.010	Oryzias_latipes_hni
ENSCSAVG00000009128	-	99	85.167	ENSORLG00015006162	rab6a	99	85.167	Oryzias_latipes_hsok
ENSCSAVG00000009128	-	99	85.167	ENSOMEG00000004379	-	99	85.167	Oryzias_melastigma
ENSCSAVG00000009128	-	99	87.379	ENSOGAG00000027043	RAB6A	98	87.379	Otolemur_garnettii
ENSCSAVG00000009128	-	99	87.440	ENSOARG00000007994	RAB6A	98	87.440	Ovis_aries
ENSCSAVG00000009128	-	99	87.864	ENSPPAG00000011436	RAB6A	98	87.864	Pan_paniscus
ENSCSAVG00000009128	-	99	87.440	ENSPPRG00000009543	RAB6A	98	87.440	Panthera_pardus
ENSCSAVG00000009128	-	99	87.864	ENSPTRG00000044137	RAB6A	98	87.864	Pan_troglodytes
ENSCSAVG00000009128	-	99	87.440	ENSPANG00000014356	RAB6A	98	87.440	Papio_anubis
ENSCSAVG00000009128	-	99	83.010	ENSPKIG00000018584	rab41	96	83.010	Paramormyrops_kingsleyae
ENSCSAVG00000009128	-	99	84.211	ENSPMGG00000010067	-	99	84.211	Periophthalmus_magnuspinnatus
ENSCSAVG00000009128	-	99	84.615	ENSPFOG00000019509	rab6a	99	84.615	Poecilia_formosa
ENSCSAVG00000009128	-	99	84.615	ENSPLAG00000019570	rab6a	99	84.615	Poecilia_latipinna
ENSCSAVG00000009128	-	99	84.466	ENSPLAG00000000376	rab41	96	84.466	Poecilia_latipinna
ENSCSAVG00000009128	-	99	84.466	ENSPMEG00000014170	rab41	96	84.466	Poecilia_mexicana
ENSCSAVG00000009128	-	99	84.615	ENSPMEG00000003369	rab6a	99	84.615	Poecilia_mexicana
ENSCSAVG00000009128	-	99	84.615	ENSPREG00000021505	rab6a	99	84.615	Poecilia_reticulata
ENSCSAVG00000009128	-	99	87.864	ENSPPYG00000003663	RAB6A	98	87.864	Pongo_abelii
ENSCSAVG00000009128	-	86	95.000	ENSPCAG00000006752	RAB6A	96	95.000	Procavia_capensis
ENSCSAVG00000009128	-	99	87.440	ENSPCOG00000021991	RAB6A	98	87.440	Propithecus_coquereli
ENSCSAVG00000009128	-	99	87.440	ENSPVAG00000017342	RAB6A	98	87.440	Pteropus_vampyrus
ENSCSAVG00000009128	-	99	83.981	ENSPNYG00000013288	rab41	96	83.981	Pundamilia_nyererei
ENSCSAVG00000009128	-	99	85.922	ENSPNYG00000020556	rab6a	98	85.922	Pundamilia_nyererei
ENSCSAVG00000009128	-	99	84.466	ENSPNAG00000021737	rab41	96	84.466	Pygocentrus_nattereri
ENSCSAVG00000009128	-	99	86.957	ENSRNOG00000018176	Rab6a	98	86.957	Rattus_norvegicus
ENSCSAVG00000009128	-	99	87.440	ENSRBIG00000030390	RAB6A	98	87.440	Rhinopithecus_bieti
ENSCSAVG00000009128	-	99	87.440	ENSRROG00000042103	RAB6A	98	87.440	Rhinopithecus_roxellana
ENSCSAVG00000009128	-	99	71.981	ENSSBOG00000028389	RAB6A	98	71.981	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009128	-	99	84.615	ENSSFOG00015002077	rab6a	99	84.615	Scleropages_formosus
ENSCSAVG00000009128	-	99	83.495	ENSSFOG00015004941	rab41	94	83.495	Scleropages_formosus
ENSCSAVG00000009128	-	99	83.099	ENSSMAG00000017205	-	98	81.643	Scophthalmus_maximus
ENSCSAVG00000009128	-	99	83.981	ENSSMAG00000015774	rab41	96	83.981	Scophthalmus_maximus
ENSCSAVG00000009128	-	99	84.615	ENSSDUG00000013496	-	99	84.615	Seriola_dumerili
ENSCSAVG00000009128	-	99	84.615	ENSSLDG00000015289	-	99	84.615	Seriola_lalandi_dorsalis
ENSCSAVG00000009128	-	99	82.524	ENSSLDG00000022282	rab41	96	82.524	Seriola_lalandi_dorsalis
ENSCSAVG00000009128	-	99	84.951	ENSSPUG00000001533	-	96	84.951	Sphenodon_punctatus
ENSCSAVG00000009128	-	99	88.350	ENSSPUG00000017301	RAB6A	98	88.350	Sphenodon_punctatus
ENSCSAVG00000009128	-	99	82.524	ENSSPAG00000006001	rab41	96	82.524	Stegastes_partitus
ENSCSAVG00000009128	-	99	85.922	ENSSPAG00000001067	-	98	85.922	Stegastes_partitus
ENSCSAVG00000009128	-	99	87.440	ENSSSCG00000014828	RAB6A	98	87.440	Sus_scrofa
ENSCSAVG00000009128	-	99	88.350	ENSTGUG00000013470	RAB6A	98	88.350	Taeniopygia_guttata
ENSCSAVG00000009128	-	99	83.981	ENSTRUG00000009223	rab41	96	83.981	Takifugu_rubripes
ENSCSAVG00000009128	-	99	83.654	ENSTRUG00000023252	rab6a	99	83.654	Takifugu_rubripes
ENSCSAVG00000009128	-	99	87.379	ENSTTRG00000005374	RAB6A	98	87.379	Tursiops_truncatus
ENSCSAVG00000009128	-	99	82.609	ENSUMAG00000010248	RAB6A	88	95.652	Ursus_maritimus
ENSCSAVG00000009128	-	99	87.440	ENSVVUG00000024550	RAB6A	98	87.440	Vulpes_vulpes
ENSCSAVG00000009128	-	86	95.000	ENSXETG00000023200	rab6a	95	95.000	Xenopus_tropicalis
ENSCSAVG00000009128	-	99	77.184	ENSXETG00000031363	-	98	77.184	Xenopus_tropicalis
ENSCSAVG00000009128	-	99	84.615	ENSXCOG00000006259	rab6a	99	84.615	Xiphophorus_couchianus
ENSCSAVG00000009128	-	99	84.615	ENSXMAG00000011903	rab6a	99	84.615	Xiphophorus_maculatus