EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009137 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 7642 bases
Position: chrreftig_16:2017575-2025216
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015562	KH_1	PF00013.29	8.5e-36	1	3
ENSCSAVP00000015562	KH_1	PF00013.29	8.5e-36	2	3
ENSCSAVP00000015562	KH_1	PF00013.29	8.5e-36	3	3
ENSCSAVP00000015564	KH_1	PF00013.29	2e-35	1	3
ENSCSAVP00000015564	KH_1	PF00013.29	2e-35	2	3
ENSCSAVP00000015564	KH_1	PF00013.29	2e-35	3	3
ENSCSAVP00000015561	KH_1	PF00013.29	2.9e-35	1	3
ENSCSAVP00000015561	KH_1	PF00013.29	2.9e-35	2	3
ENSCSAVP00000015561	KH_1	PF00013.29	2.9e-35	3	3
ENSCSAVP00000015563	KH_1	PF00013.29	3.7e-34	1	3
ENSCSAVP00000015563	KH_1	PF00013.29	3.7e-34	2	3
ENSCSAVP00000015563	KH_1	PF00013.29	3.7e-34	3	3
ENSCSAVP00000015563	KH_2	PF07650.17	3.4e-08	1	1
ENSCSAVP00000015562	KH_2	PF07650.17	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015742	-	1395	-	ENSCSAVP00000015564	464 (aa)	-	H2ZD98
ENSCSAVT00000015741	-	1431	-	ENSCSAVP00000015563	476 (aa)	-	H2ZD97
ENSCSAVT00000015739	-	1506	-	ENSCSAVP00000015561	502 (aa)	-	H2ZD95
ENSCSAVT00000015740	-	1113	-	ENSCSAVP00000015562	370 (aa)	-	H2ZD96

Gene Model

Click here to download ENSCSAVG00000009137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009137	-	59	32.857	ENSCSAVG00000003294	-	76	30.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009137	-	88	61.176	ENSG00000104967	NOVA2	97	44.106	Homo_sapiens
ENSCSAVG00000009137	-	76	61.176	ENSAMEG00000000649	NOVA2	91	54.237	Ailuropoda_melanoleuca
ENSCSAVG00000009137	-	99	47.629	ENSACAG00000003724	NOVA2	95	48.276	Anolis_carolinensis
ENSCSAVG00000009137	-	88	61.176	ENSANAG00000022520	NOVA2	92	48.267	Aotus_nancymaae
ENSCSAVG00000009137	-	88	61.176	ENSBTAG00000013157	NOVA2	97	44.106	Bos_taurus
ENSCSAVG00000009137	-	88	61.176	ENSCJAG00000012121	NOVA2	79	51.673	Callithrix_jacchus
ENSCSAVG00000009137	-	88	61.176	ENSCAFG00000004359	NOVA2	90	50.534	Canis_familiaris
ENSCSAVG00000009137	-	88	61.176	ENSCAFG00020001763	NOVA2	62	44.939	Canis_lupus_dingo
ENSCSAVG00000009137	-	88	61.176	ENSCHIG00000010547	NOVA2	80	51.673	Capra_hircus
ENSCSAVG00000009137	-	97	59.406	ENSCPOG00000020582	NOVA2	97	59.406	Cavia_porcellus
ENSCSAVG00000009137	-	88	61.176	ENSCCAG00000037311	NOVA2	78	51.673	Cebus_capucinus
ENSCSAVG00000009137	-	88	61.176	ENSCATG00000045122	NOVA2	97	44.106	Cercocebus_atys
ENSCSAVG00000009137	-	50	59.406	ENSCLAG00000000991	-	66	70.130	Chinchilla_lanigera
ENSCSAVG00000009137	-	88	62.651	ENSCSAG00000003105	NOVA2	93	45.283	Chlorocebus_sabaeus
ENSCSAVG00000009137	-	93	54.104	ENSCPBG00000007153	NOVA2	89	48.028	Chrysemys_picta_bellii
ENSCSAVG00000009137	-	99	91.734	ENSCING00000023247	-	90	91.734	Ciona_intestinalis
ENSCSAVG00000009137	-	88	61.176	ENSCGRG00001013374	Nova2	88	44.196	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009137	-	88	61.176	ENSDNOG00000031258	NOVA2	89	51.673	Dasypus_novemcinctus
ENSCSAVG00000009137	-	97	58.173	ENSDORG00000026568	Nova2	92	51.373	Dipodomys_ordii
ENSCSAVG00000009137	-	99	46.104	ENSEBUG00000012405	NOVA2	94	47.754	Eptatretus_burgeri
ENSCSAVG00000009137	-	94	37.209	ENSEBUG00000004758	-	92	37.209	Eptatretus_burgeri
ENSCSAVG00000009137	-	88	61.176	ENSEASG00005014236	NOVA2	90	51.673	Equus_asinus_asinus
ENSCSAVG00000009137	-	88	61.176	ENSECAG00000024041	NOVA2	77	47.104	Equus_caballus
ENSCSAVG00000009137	-	88	61.176	ENSFCAG00000024784	NOVA2	97	44.467	Felis_catus
ENSCSAVG00000009137	-	98	47.297	ENSGAGG00000009498	NOVA2	96	47.955	Gopherus_agassizii
ENSCSAVG00000009137	-	88	61.176	ENSGGOG00000000325	NOVA2	95	50.368	Gorilla_gorilla
ENSCSAVG00000009137	-	88	61.176	ENSHGLG00000016103	NOVA2	78	60.440	Heterocephalus_glaber_female
ENSCSAVG00000009137	-	97	57.838	ENSHGLG00100015153	NOVA2	97	60.440	Heterocephalus_glaber_male
ENSCSAVG00000009137	-	88	61.176	ENSSTOG00000022126	NOVA2	95	51.673	Ictidomys_tridecemlineatus
ENSCSAVG00000009137	-	97	59.113	ENSJJAG00000000944	Nova2	97	59.113	Jaculus_jaculus
ENSCSAVG00000009137	-	86	61.176	ENSLAFG00000025917	NOVA2	87	57.732	Loxodonta_africana
ENSCSAVG00000009137	-	83	60.440	ENSMFAG00000043672	NOVA2	69	59.783	Macaca_fascicularis
ENSCSAVG00000009137	-	98	49.821	ENSMMUG00000004085	NOVA2	91	47.188	Macaca_mulatta
ENSCSAVG00000009137	-	88	61.176	ENSMNEG00000040253	NOVA2	84	45.021	Macaca_nemestrina
ENSCSAVG00000009137	-	75	61.176	ENSMLEG00000030389	NOVA2	92	60.440	Mandrillus_leucophaeus
ENSCSAVG00000009137	-	88	61.176	ENSMAUG00000014038	Nova2	76	60.440	Mesocricetus_auratus
ENSCSAVG00000009137	-	88	61.176	ENSMICG00000028720	NOVA2	97	44.106	Microcebus_murinus
ENSCSAVG00000009137	-	88	61.176	ENSMOCG00000018489	Nova2	89	44.130	Microtus_ochrogaster
ENSCSAVG00000009137	-	65	48.889	ENSMODG00000021529	NOVA2	85	43.807	Monodelphis_domestica
ENSCSAVG00000009137	-	88	61.176	MGP_CAROLIEiJ_G0029261	-	98	44.534	Mus_caroli
ENSCSAVG00000009137	-	88	61.176	MGP_CAROLIEiJ_G0029262	-	98	44.534	Mus_caroli
ENSCSAVG00000009137	-	88	61.176	ENSMUSG00000030411	Nova2	97	43.927	Mus_musculus
ENSCSAVG00000009137	-	88	61.176	MGP_PahariEiJ_G0021121	-	91	44.130	Mus_pahari
ENSCSAVG00000009137	-	88	61.176	MGP_PahariEiJ_G0021122	-	97	43.927	Mus_pahari
ENSCSAVG00000009137	-	88	61.176	MGP_SPRETEiJ_G0030345	-	86	44.130	Mus_spretus
ENSCSAVG00000009137	-	88	61.176	MGP_SPRETEiJ_G0030346	-	97	43.927	Mus_spretus
ENSCSAVG00000009137	-	98	50.909	ENSMPUG00000005444	NOVA2	89	65.000	Mustela_putorius_furo
ENSCSAVG00000009137	-	52	52.469	ENSMLUG00000008039	-	99	51.744	Myotis_lucifugus
ENSCSAVG00000009137	-	99	56.109	ENSNGAG00000014104	Nova2	96	51.172	Nannospalax_galili
ENSCSAVG00000009137	-	52	59.113	ENSNLEG00000002399	-	86	55.319	Nomascus_leucogenys
ENSCSAVG00000009137	-	89	58.242	ENSMEUG00000000562	NOVA2	84	42.494	Notamacropus_eugenii
ENSCSAVG00000009137	-	97	59.406	ENSOPRG00000010051	NOVA2	97	70.130	Ochotona_princeps
ENSCSAVG00000009137	-	88	61.176	ENSODEG00000008485	NOVA2	93	43.505	Octodon_degus
ENSCSAVG00000009137	-	97	49.495	ENSOCUG00000022891	NOVA2	95	54.545	Oryctolagus_cuniculus
ENSCSAVG00000009137	-	88	61.176	ENSOGAG00000028973	NOVA2	85	51.673	Otolemur_garnettii
ENSCSAVG00000009137	-	54	58.173	ENSOARG00000010434	-	81	53.750	Ovis_aries
ENSCSAVG00000009137	-	66	61.176	ENSPPAG00000035049	-	96	53.165	Pan_paniscus
ENSCSAVG00000009137	-	88	61.176	ENSPPRG00000005941	NOVA2	90	51.673	Panthera_pardus
ENSCSAVG00000009137	-	75	59.113	ENSPTIG00000015368	NOVA2	62	59.113	Panthera_tigris_altaica
ENSCSAVG00000009137	-	88	61.176	ENSPTRG00000011173	NOVA2	97	44.106	Pan_troglodytes
ENSCSAVG00000009137	-	88	61.176	ENSPANG00000023868	NOVA2	89	51.673	Papio_anubis
ENSCSAVG00000009137	-	88	61.176	ENSPCIG00000007632	NOVA2	91	45.212	Phascolarctos_cinereus
ENSCSAVG00000009137	-	65	47.955	ENSPPYG00000010139	-	99	38.889	Pongo_abelii
ENSCSAVG00000009137	-	88	61.176	ENSPCOG00000022693	NOVA2	92	51.673	Propithecus_coquereli
ENSCSAVG00000009137	-	89	50.929	ENSPVAG00000006169	NOVA2	91	51.673	Pteropus_vampyrus
ENSCSAVG00000009137	-	88	61.176	ENSRNOG00000013847	Nova2	97	43.725	Rattus_norvegicus
ENSCSAVG00000009137	-	76	61.176	ENSRROG00000037399	NOVA2	67	60.440	Rhinopithecus_roxellana
ENSCSAVG00000009137	-	50	51.639	ENSSBOG00000001000	-	58	70.130	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009137	-	97	44.932	ENSSPUG00000002591	NOVA2	83	62.500	Sphenodon_punctatus
ENSCSAVG00000009137	-	88	61.176	ENSSSCG00000035029	NOVA2	97	44.106	Sus_scrofa
ENSCSAVG00000009137	-	97	52.128	ENSTRUG00000019498	NOVA2	89	61.250	Takifugu_rubripes
ENSCSAVG00000009137	-	65	50.929	ENSTTRG00000001612	NOVA2	98	40.632	Tursiops_truncatus
ENSCSAVG00000009137	-	97	46.667	ENSUAMG00000015647	NOVA2	96	46.104	Ursus_americanus
ENSCSAVG00000009137	-	57	53.333	ENSVVUG00000002971	-	69	70.130	Vulpes_vulpes
ENSCSAVG00000009137	-	97	51.042	ENSXETG00000019101	nova2	78	63.750	Xenopus_tropicalis