EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009145 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5073 bases
Position: chrreftig_49:2004276-2009348
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015574	RRM_1	PF00076.22	2.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015752	-	1426	-	ENSCSAVP00000015574	415 (aa)	-	H2ZDA8

Gene Model

Click here to download ENSCSAVG00000009145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009145's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009145	-	99	64.929	ENSG00000086589	RBM22	100	81.183	Homo_sapiens
ENSCSAVG00000009145	-	99	61.520	ENSAPOG00000010338	rbm22	98	62.028	Acanthochromis_polyacanthus
ENSCSAVG00000009145	-	99	64.929	ENSAMEG00000004544	RBM22	98	64.455	Ailuropoda_melanoleuca
ENSCSAVG00000009145	-	99	55.607	ENSACIG00000016372	rbm22	98	55.916	Amphilophus_citrinellus
ENSCSAVG00000009145	-	99	61.520	ENSAOCG00000007179	rbm22	98	62.028	Amphiprion_ocellaris
ENSCSAVG00000009145	-	99	61.520	ENSAPEG00000016689	rbm22	98	62.028	Amphiprion_percula
ENSCSAVG00000009145	-	99	63.895	ENSATEG00000008286	rbm22	98	62.500	Anabas_testudineus
ENSCSAVG00000009145	-	98	62.500	ENSAPLG00000016408	RBM22	97	62.350	Anas_platyrhynchos
ENSCSAVG00000009145	-	99	64.455	ENSACAG00000014750	RBM22	98	64.439	Anolis_carolinensis
ENSCSAVG00000009145	-	99	64.929	ENSANAG00000033743	-	98	64.218	Aotus_nancymaae
ENSCSAVG00000009145	-	91	58.140	ENSANAG00000019688	-	98	55.000	Aotus_nancymaae
ENSCSAVG00000009145	-	99	62.945	ENSACLG00000008863	rbm22	98	61.972	Astatotilapia_calliptera
ENSCSAVG00000009145	-	99	61.085	ENSAMXG00000018529	-	98	62.264	Astyanax_mexicanus
ENSCSAVG00000009145	-	99	62.028	ENSAMXG00000038080	rbm22	98	56.776	Astyanax_mexicanus
ENSCSAVG00000009145	-	99	64.929	ENSBTAG00000030366	RBM22	98	64.455	Bos_taurus
ENSCSAVG00000009145	-	81	57.143	WBGene00011722	rbm-22	81	57.434	Caenorhabditis_elegans
ENSCSAVG00000009145	-	99	64.929	ENSCJAG00000020963	RBM22	98	64.218	Callithrix_jacchus
ENSCSAVG00000009145	-	80	68.882	ENSCJAG00000013247	-	82	67.606	Callithrix_jacchus
ENSCSAVG00000009145	-	99	64.623	ENSCAFG00000018082	RBM22	98	64.151	Canis_familiaris
ENSCSAVG00000009145	-	99	64.929	ENSCAFG00020023671	RBM22	98	64.455	Canis_lupus_dingo
ENSCSAVG00000009145	-	99	64.929	ENSCHIG00000015561	RBM22	98	64.455	Capra_hircus
ENSCSAVG00000009145	-	88	54.400	ENSTSYG00000037586	-	98	55.676	Carlito_syrichta
ENSCSAVG00000009145	-	99	64.929	ENSTSYG00000003939	-	98	64.455	Carlito_syrichta
ENSCSAVG00000009145	-	94	59.259	ENSCAPG00000002598	RBM22	94	60.051	Cavia_aperea
ENSCSAVG00000009145	-	99	64.929	ENSCPOG00000001946	RBM22	98	64.455	Cavia_porcellus
ENSCSAVG00000009145	-	99	64.929	ENSCCAG00000033546	RBM22	98	64.218	Cebus_capucinus
ENSCSAVG00000009145	-	99	64.929	ENSCATG00000042133	RBM22	98	64.455	Cercocebus_atys
ENSCSAVG00000009145	-	99	52.267	ENSCLAG00000014221	-	92	51.905	Chinchilla_lanigera
ENSCSAVG00000009145	-	99	54.394	ENSCLAG00000007106	-	98	54.067	Chinchilla_lanigera
ENSCSAVG00000009145	-	99	64.929	ENSCLAG00000010842	-	98	64.455	Chinchilla_lanigera
ENSCSAVG00000009145	-	80	70.997	ENSCSAG00000019006	-	89	69.577	Chlorocebus_sabaeus
ENSCSAVG00000009145	-	72	69.333	ENSCHOG00000004192	-	100	69.333	Choloepus_hoffmanni
ENSCSAVG00000009145	-	99	64.929	ENSCHOG00000001041	-	98	64.455	Choloepus_hoffmanni
ENSCSAVG00000009145	-	99	64.133	ENSCHOG00000013522	-	98	63.571	Choloepus_hoffmanni
ENSCSAVG00000009145	-	99	63.981	ENSCPBG00000010094	RBM22	98	64.692	Chrysemys_picta_bellii
ENSCSAVG00000009145	-	100	88.462	ENSCING00000005843	zf(c3h)-12	100	89.904	Ciona_intestinalis
ENSCSAVG00000009145	-	99	64.929	ENSCANG00000025232	RBM22	98	64.455	Colobus_angolensis_palliatus
ENSCSAVG00000009145	-	99	64.929	ENSCGRG00001015110	Rbm22	98	64.455	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009145	-	99	62.440	ENSCGRG00000011751	Rbm22	98	62.136	Cricetulus_griseus_crigri
ENSCSAVG00000009145	-	99	62.708	ENSCSEG00000010790	rbm22	98	62.411	Cynoglossus_semilaevis
ENSCSAVG00000009145	-	99	61.574	ENSCVAG00000010670	rbm22	98	62.411	Cyprinodon_variegatus
ENSCSAVG00000009145	-	99	61.737	ENSDARG00000010238	rbm22	98	62.295	Danio_rerio
ENSCSAVG00000009145	-	99	64.929	ENSDNOG00000011166	RBM22	98	64.455	Dasypus_novemcinctus
ENSCSAVG00000009145	-	99	48.104	ENSDORG00000005329	Rbm22	98	47.630	Dipodomys_ordii
ENSCSAVG00000009145	-	95	57.107	FBgn0037220	CG14641	99	54.481	Drosophila_melanogaster
ENSCSAVG00000009145	-	94	74.074	ENSEBUG00000016742	-	99	82.979	Eptatretus_burgeri
ENSCSAVG00000009145	-	99	64.929	ENSEASG00005002681	RBM22	98	64.455	Equus_asinus_asinus
ENSCSAVG00000009145	-	80	70.997	ENSECAG00000014940	RBM22	76	69.577	Equus_caballus
ENSCSAVG00000009145	-	99	49.289	ENSEEUG00000009778	-	98	48.815	Erinaceus_europaeus
ENSCSAVG00000009145	-	99	59.353	ENSEEUG00000005638	-	98	63.007	Erinaceus_europaeus
ENSCSAVG00000009145	-	99	63.133	ENSELUG00000001106	rbm22	98	63.855	Esox_lucius
ENSCSAVG00000009145	-	99	64.929	ENSFCAG00000018845	RBM22	98	64.455	Felis_catus
ENSCSAVG00000009145	-	99	63.507	ENSFALG00000008051	RBM22	98	63.981	Ficedula_albicollis
ENSCSAVG00000009145	-	99	64.929	ENSFDAG00000020067	RBM22	98	64.455	Fukomys_damarensis
ENSCSAVG00000009145	-	99	61.045	ENSFHEG00000014032	rbm22	98	61.557	Fundulus_heteroclitus
ENSCSAVG00000009145	-	80	70.091	ENSGMOG00000010186	rbm22	99	62.207	Gadus_morhua
ENSCSAVG00000009145	-	99	63.270	ENSGALG00000004555	RBM22	98	63.981	Gallus_gallus
ENSCSAVG00000009145	-	99	62.470	ENSGAFG00000008621	rbm22	98	62.470	Gambusia_affinis
ENSCSAVG00000009145	-	99	60.930	ENSGACG00000018027	rbm22	99	61.916	Gasterosteus_aculeatus
ENSCSAVG00000009145	-	99	63.744	ENSGAGG00000024305	RBM22	98	64.455	Gopherus_agassizii
ENSCSAVG00000009145	-	99	64.929	ENSGGOG00000012947	RBM22	98	64.455	Gorilla_gorilla
ENSCSAVG00000009145	-	99	62.945	ENSHBUG00000002941	rbm22	98	61.972	Haplochromis_burtoni
ENSCSAVG00000009145	-	99	64.929	ENSHGLG00000008488	RBM22	98	64.455	Heterocephalus_glaber_female
ENSCSAVG00000009145	-	98	64.649	ENSHGLG00100006872	RBM22	97	64.165	Heterocephalus_glaber_male
ENSCSAVG00000009145	-	78	70.370	ENSHCOG00000016334	rbm22	89	68.169	Hippocampus_comes
ENSCSAVG00000009145	-	99	62.500	ENSIPUG00000019751	rbm22	98	63.785	Ictalurus_punctatus
ENSCSAVG00000009145	-	99	56.667	ENSSTOG00000029346	-	96	55.847	Ictidomys_tridecemlineatus
ENSCSAVG00000009145	-	99	52.844	ENSSTOG00000027197	RBM22	98	52.370	Ictidomys_tridecemlineatus
ENSCSAVG00000009145	-	99	64.929	ENSJJAG00000009565	Rbm22	98	64.455	Jaculus_jaculus
ENSCSAVG00000009145	-	99	61.283	ENSKMAG00000004354	rbm22	98	61.792	Kryptolebias_marmoratus
ENSCSAVG00000009145	-	99	61.045	ENSLBEG00000027750	rbm22	93	61.446	Labrus_bergylta
ENSCSAVG00000009145	-	99	62.061	ENSLOCG00000010989	rbm22	98	63.850	Lepisosteus_oculatus
ENSCSAVG00000009145	-	99	64.929	ENSLAFG00000006638	RBM22	98	64.455	Loxodonta_africana
ENSCSAVG00000009145	-	99	64.929	ENSMFAG00000004034	RBM22	98	64.455	Macaca_fascicularis
ENSCSAVG00000009145	-	99	64.929	ENSMMUG00000020683	RBM22	98	64.455	Macaca_mulatta
ENSCSAVG00000009145	-	99	64.929	ENSMNEG00000035500	RBM22	98	64.455	Macaca_nemestrina
ENSCSAVG00000009145	-	99	64.929	ENSMLEG00000034825	RBM22	98	64.455	Mandrillus_leucophaeus
ENSCSAVG00000009145	-	99	61.758	ENSMAMG00000007370	rbm22	98	62.028	Mastacembelus_armatus
ENSCSAVG00000009145	-	99	62.945	ENSMZEG00005013001	rbm22	98	61.972	Maylandia_zebra
ENSCSAVG00000009145	-	99	63.270	ENSMGAG00000006298	RBM22	98	63.981	Meleagris_gallopavo
ENSCSAVG00000009145	-	99	64.929	ENSMAUG00000001133	Rbm22	98	64.455	Mesocricetus_auratus
ENSCSAVG00000009145	-	99	64.929	ENSMICG00000033712	RBM22	98	64.455	Microcebus_murinus
ENSCSAVG00000009145	-	99	60.190	ENSMOCG00000018311	Rbm22	98	59.716	Microtus_ochrogaster
ENSCSAVG00000009145	-	99	62.708	ENSMMOG00000003192	rbm22	98	61.737	Mola_mola
ENSCSAVG00000009145	-	99	61.520	ENSMODG00000006398	-	98	61.814	Monodelphis_domestica
ENSCSAVG00000009145	-	99	63.507	ENSMODG00000009574	-	98	64.218	Monodelphis_domestica
ENSCSAVG00000009145	-	99	61.520	ENSMALG00000013964	rbm22	98	61.792	Monopterus_albus
ENSCSAVG00000009145	-	99	64.929	MGP_CAROLIEiJ_G0022307	Rbm22	98	64.455	Mus_caroli
ENSCSAVG00000009145	-	99	64.929	ENSMUSG00000024604	Rbm22	98	64.455	Mus_musculus
ENSCSAVG00000009145	-	99	64.929	MGP_PahariEiJ_G0019037	Rbm22	98	64.455	Mus_pahari
ENSCSAVG00000009145	-	99	64.929	MGP_SPRETEiJ_G0023219	Rbm22	98	64.455	Mus_spretus
ENSCSAVG00000009145	-	99	64.929	ENSMPUG00000013760	RBM22	98	64.455	Mustela_putorius_furo
ENSCSAVG00000009145	-	99	64.929	ENSMLUG00000009040	RBM22	98	64.455	Myotis_lucifugus
ENSCSAVG00000009145	-	99	63.723	ENSMLUG00000003461	-	98	63.507	Myotis_lucifugus
ENSCSAVG00000009145	-	99	64.929	ENSNGAG00000018233	Rbm22	98	64.455	Nannospalax_galili
ENSCSAVG00000009145	-	89	59.574	ENSNBRG00000010458	rbm22	88	65.396	Neolamprologus_brichardi
ENSCSAVG00000009145	-	99	64.929	ENSNLEG00000010397	-	98	64.455	Nomascus_leucogenys
ENSCSAVG00000009145	-	74	55.882	ENSMEUG00000001573	-	72	55.882	Notamacropus_eugenii
ENSCSAVG00000009145	-	99	59.390	ENSMEUG00000009348	-	98	59.485	Notamacropus_eugenii
ENSCSAVG00000009145	-	99	64.929	ENSOPRG00000008481	-	98	64.455	Ochotona_princeps
ENSCSAVG00000009145	-	99	52.267	ENSOPRG00000016612	-	98	53.253	Ochotona_princeps
ENSCSAVG00000009145	-	99	64.455	ENSODEG00000005016	RBM22	98	63.981	Octodon_degus
ENSCSAVG00000009145	-	99	62.796	ENSONIG00000013049	rbm22	99	61.827	Oreochromis_niloticus
ENSCSAVG00000009145	-	99	62.353	ENSOANG00000002314	RBM22	98	63.529	Ornithorhynchus_anatinus
ENSCSAVG00000009145	-	99	64.929	ENSOCUG00000011532	RBM22	98	64.455	Oryctolagus_cuniculus
ENSCSAVG00000009145	-	99	60.093	ENSORLG00000004975	rbm22	98	61.412	Oryzias_latipes
ENSCSAVG00000009145	-	99	60.093	ENSORLG00020012969	rbm22	98	61.412	Oryzias_latipes_hni
ENSCSAVG00000009145	-	99	60.093	ENSORLG00015022508	rbm22	98	61.412	Oryzias_latipes_hsok
ENSCSAVG00000009145	-	99	59.070	ENSOMEG00000004904	rbm22	98	61.647	Oryzias_melastigma
ENSCSAVG00000009145	-	99	62.322	ENSOGAG00000011086	RBM22	98	61.995	Otolemur_garnettii
ENSCSAVG00000009145	-	99	62.972	ENSOARG00000007633	RBM22	98	63.915	Ovis_aries
ENSCSAVG00000009145	-	99	64.929	ENSPPAG00000034432	RBM22	98	64.455	Pan_paniscus
ENSCSAVG00000009145	-	99	64.929	ENSPPRG00000011577	RBM22	98	64.455	Panthera_pardus
ENSCSAVG00000009145	-	99	64.929	ENSPTIG00000004453	RBM22	98	64.455	Panthera_tigris_altaica
ENSCSAVG00000009145	-	99	64.929	ENSPTRG00000017423	RBM22	98	64.455	Pan_troglodytes
ENSCSAVG00000009145	-	99	64.929	ENSPANG00000011297	RBM22	98	64.455	Papio_anubis
ENSCSAVG00000009145	-	78	71.605	ENSPKIG00000010315	rbm22	98	63.593	Paramormyrops_kingsleyae
ENSCSAVG00000009145	-	78	69.040	ENSPKIG00000019326	rbm22	80	66.856	Paramormyrops_kingsleyae
ENSCSAVG00000009145	-	99	63.744	ENSPSIG00000012818	RBM22	98	64.692	Pelodiscus_sinensis
ENSCSAVG00000009145	-	99	62.590	ENSPMGG00000017638	rbm22	99	64.133	Periophthalmus_magnuspinnatus
ENSCSAVG00000009145	-	99	64.692	ENSPEMG00000001753	Rbm22	98	64.218	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009145	-	78	56.160	ENSPMAG00000007317	-	98	56.433	Petromyzon_marinus
ENSCSAVG00000009145	-	99	52.133	ENSPCIG00000015088	RBM22	98	52.844	Phascolarctos_cinereus
ENSCSAVG00000009145	-	99	60.941	ENSPFOG00000005625	rbm22	98	61.939	Poecilia_formosa
ENSCSAVG00000009145	-	99	61.343	ENSPLAG00000006344	rbm22	98	61.939	Poecilia_latipinna
ENSCSAVG00000009145	-	99	56.941	ENSPMEG00000007992	rbm22	98	59.536	Poecilia_mexicana
ENSCSAVG00000009145	-	99	60.952	ENSPREG00000003546	rbm22	98	61.466	Poecilia_reticulata
ENSCSAVG00000009145	-	99	64.929	ENSPPYG00000015955	RBM22	98	64.455	Pongo_abelii
ENSCSAVG00000009145	-	80	55.589	ENSPCAG00000015091	RBM22	93	55.211	Procavia_capensis
ENSCSAVG00000009145	-	99	64.929	ENSPVAG00000014231	RBM22	98	64.455	Pteropus_vampyrus
ENSCSAVG00000009145	-	78	65.846	ENSPNYG00000000380	rbm22	88	65.396	Pundamilia_nyererei
ENSCSAVG00000009145	-	80	71.084	ENSPNAG00000010001	-	98	63.679	Pygocentrus_nattereri
ENSCSAVG00000009145	-	99	62.383	ENSPNAG00000002687	rbm22	98	63.765	Pygocentrus_nattereri
ENSCSAVG00000009145	-	99	63.270	ENSRNOG00000019235	Rbm22	98	64.218	Rattus_norvegicus
ENSCSAVG00000009145	-	99	64.929	ENSRBIG00000041683	RBM22	98	64.455	Rhinopithecus_bieti
ENSCSAVG00000009145	-	99	64.929	ENSRROG00000041637	RBM22	98	64.455	Rhinopithecus_roxellana
ENSCSAVG00000009145	-	99	64.692	ENSSBOG00000035400	-	98	63.981	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009145	-	99	63.270	ENSSHAG00000017734	-	98	63.981	Sarcophilus_harrisii
ENSCSAVG00000009145	-	99	61.611	ENSSFOG00015014955	rbm22	98	63.593	Scleropages_formosus
ENSCSAVG00000009145	-	99	63.571	ENSSFOG00015022259	rbm22	98	63.333	Scleropages_formosus
ENSCSAVG00000009145	-	99	61.283	ENSSMAG00000002921	rbm22	98	62.005	Scophthalmus_maximus
ENSCSAVG00000009145	-	99	63.658	ENSSDUG00000003846	rbm22	98	62.500	Seriola_dumerili
ENSCSAVG00000009145	-	99	63.658	ENSSLDG00000003804	rbm22	98	62.500	Seriola_lalandi_dorsalis
ENSCSAVG00000009145	-	99	64.929	ENSSPUG00000003986	RBM22	98	64.539	Sphenodon_punctatus
ENSCSAVG00000009145	-	99	61.758	ENSSPAG00000000383	rbm22	98	62.264	Stegastes_partitus
ENSCSAVG00000009145	-	99	64.929	ENSSSCG00000023231	RBM22	98	64.455	Sus_scrofa
ENSCSAVG00000009145	-	99	63.507	ENSTGUG00000000850	RBM22	98	63.981	Taeniopygia_guttata
ENSCSAVG00000009145	-	99	61.201	ENSTRUG00000004724	rbm22	98	63.507	Takifugu_rubripes
ENSCSAVG00000009145	-	99	53.555	ENSTBEG00000005617	RBM22	98	53.081	Tupaia_belangeri
ENSCSAVG00000009145	-	99	64.929	ENSTTRG00000012778	RBM22	98	64.455	Tursiops_truncatus
ENSCSAVG00000009145	-	99	64.929	ENSUAMG00000025133	RBM22	98	64.455	Ursus_americanus
ENSCSAVG00000009145	-	99	64.929	ENSUMAG00000003651	RBM22	98	64.455	Ursus_maritimus
ENSCSAVG00000009145	-	99	64.929	ENSVVUG00000007193	RBM22	98	64.455	Vulpes_vulpes
ENSCSAVG00000009145	-	99	62.530	ENSXETG00000020435	rbm22	98	60.277	Xenopus_tropicalis
ENSCSAVG00000009145	-	99	57.245	ENSXCOG00000003316	rbm22	100	59.048	Xiphophorus_couchianus
ENSCSAVG00000009145	-	99	61.283	ENSXMAG00000008681	rbm22	98	61.792	Xiphophorus_maculatus