EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000009147 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
4899 bases
Position
chrreftig_0:1788070-1792968
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000015577MMR_HSR1PF01926.232.1e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000015755-1303-ENSCSAVP00000015577204 (aa)-H2ZDB1
Gene Model
Click here to download ENSCSAVG00000009147's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009147's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000009147-9245.596ENSCSAVG00000000160-9045.596
ENSCSAVG00000009147-9532.353ENSCSAVG00000009503-9732.353
ENSCSAVG00000009147-9546.193ENSCSAVG00000010348-9546.193
ENSCSAVG00000009147-8840.782ENSCSAVG00000009128-8340.782
ENSCSAVG00000009147-9645.960ENSCSAVG00000002088-9345.960
ENSCSAVG00000009147-9635.500ENSCSAVG00000005689-9735.500
ENSCSAVG00000009147-10039.234ENSCSAVG00000010245-7439.234
ENSCSAVG00000009147-7534.395ENSCSAVG00000006042-7234.395
ENSCSAVG00000009147-9639.109ENSCSAVG00000002804-9439.109
ENSCSAVG00000009147-8145.087ENSCSAVG00000000613-8746.584
ENSCSAVG00000009147-7737.888ENSCSAVG00000007813-6137.888
ENSCSAVG00000009147-8334.659ENSCSAVG00000005450-7734.659
ENSCSAVG00000009147-5730.252ENSCSAVG00000008336-6630.172
ENSCSAVG00000009147-8037.805ENSCSAVG00000001356-7235.838
ENSCSAVG00000009147-7865.000ENSCSAVG00000008995-10065.000
ENSCSAVG00000009147-9241.799ENSCSAVG00000005120-7741.799
ENSCSAVG00000009147-8347.368ENSCSAVG00000008684-8147.368
ENSCSAVG00000009147-8339.655ENSCSAVG00000011162-8439.655
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000009147-9988.119ENSG00000174903RAB1B10088.119Homo_sapiens
ENSCSAVG00000009147-9987.685ENSAPOG00000007746rab1ab10087.685Acanthochromis_polyacanthus
ENSCSAVG00000009147-9988.614ENSAPOG00000012767rab1ba10088.614Acanthochromis_polyacanthus
ENSCSAVG00000009147-9988.119ENSAMEG00000017135RAB1B10088.119Ailuropoda_melanoleuca
ENSCSAVG00000009147-9886.500ENSACIG00000019049rab1ab8998.485Amphilophus_citrinellus
ENSCSAVG00000009147-9985.784ENSACIG00000014625-10085.784Amphilophus_citrinellus
ENSCSAVG00000009147-9988.614ENSAOCG00000003965rab1ba10088.614Amphiprion_ocellaris
ENSCSAVG00000009147-9987.685ENSAOCG00000006385rab1ab10087.685Amphiprion_ocellaris
ENSCSAVG00000009147-9988.614ENSAPEG00000012105rab1ba10088.614Amphiprion_percula
ENSCSAVG00000009147-9987.685ENSAPEG00000001358rab1ab10087.685Amphiprion_percula
ENSCSAVG00000009147-9988.119ENSATEG00000015844-10088.119Anabas_testudineus
ENSCSAVG00000009147-9988.614ENSATEG00000002479rab1ba10088.614Anabas_testudineus
ENSCSAVG00000009147-9987.685ENSATEG00000008052rab1ab10087.685Anabas_testudineus
ENSCSAVG00000009147-6697.037ENSACAG00000009125RAB1B9697.037Anolis_carolinensis
ENSCSAVG00000009147-9988.119ENSANAG00000022585RAB1B10088.119Aotus_nancymaae
ENSCSAVG00000009147-9988.614ENSACLG00000013668rab1ba10088.614Astatotilapia_calliptera
ENSCSAVG00000009147-9987.685ENSACLG00000007644rab1ab10087.685Astatotilapia_calliptera
ENSCSAVG00000009147-9989.109ENSAMXG00000032564rab1ab10089.109Astyanax_mexicanus
ENSCSAVG00000009147-9887.437ENSAMXG00000003547rab1ba8987.437Astyanax_mexicanus
ENSCSAVG00000009147-9886.935ENSBTAG00000046485RAB1B6785.644Bos_taurus
ENSCSAVG00000009147-9987.129ENSCJAG00000047933-10087.129Callithrix_jacchus
ENSCSAVG00000009147-9988.119ENSCJAG00000001599-10088.119Callithrix_jacchus
ENSCSAVG00000009147-9988.119ENSCAFG00000012855RAB1B9988.119Canis_familiaris
ENSCSAVG00000009147-9988.119ENSCAFG00020015406-10088.119Canis_lupus_dingo
ENSCSAVG00000009147-9988.119ENSCHIG00000015549RAB1B10088.119Capra_hircus
ENSCSAVG00000009147-9986.275ENSTSYG00000025638RAB1B9986.275Carlito_syrichta
ENSCSAVG00000009147-9787.817ENSCAPG00000015495RAB1B9887.817Cavia_aperea
ENSCSAVG00000009147-9988.119ENSCPOG00000014868RAB1B10088.119Cavia_porcellus
ENSCSAVG00000009147-9988.119ENSCCAG00000021540RAB1B10088.119Cebus_capucinus
ENSCSAVG00000009147-9988.119ENSCATG00000002342RAB1B10088.119Cercocebus_atys
ENSCSAVG00000009147-9988.119ENSCLAG00000015776RAB1B10088.119Chinchilla_lanigera
ENSCSAVG00000009147-9787.817ENSCSAG00000008145RAB1B8887.817Chlorocebus_sabaeus
ENSCSAVG00000009147-6997.872ENSCSAG00000014775-9897.872Chlorocebus_sabaeus
ENSCSAVG00000009147-9987.129ENSCPBG00000022446RAB1B10087.129Chrysemys_picta_bellii
ENSCSAVG00000009147-100100.000ENSCING00000023081-100100.000Ciona_intestinalis
ENSCSAVG00000009147-9988.119ENSCANG00000042299RAB1B10088.119Colobus_angolensis_palliatus
ENSCSAVG00000009147-9987.624ENSCGRG00001014956Rab1b10087.624Cricetulus_griseus_chok1gshd
ENSCSAVG00000009147-9987.624ENSCGRG00000015564Rab1b10087.624Cricetulus_griseus_crigri
ENSCSAVG00000009147-9988.119ENSCSEG00000018732rab1ba10088.119Cynoglossus_semilaevis
ENSCSAVG00000009147-9987.624ENSCSEG00000020977-9987.624Cynoglossus_semilaevis
ENSCSAVG00000009147-9985.366ENSCVAG00000022585-10085.366Cyprinodon_variegatus
ENSCSAVG00000009147-9989.604ENSCVAG00000022799-10089.604Cyprinodon_variegatus
ENSCSAVG00000009147-9989.109ENSDARG00000029663rab1ab10089.109Danio_rerio
ENSCSAVG00000009147-9988.614ENSDARG00000052263rab1aa10088.614Danio_rerio
ENSCSAVG00000009147-9988.614ENSDARG00000058044rab1ba10088.614Danio_rerio
ENSCSAVG00000009147-9986.275ENSDARG00000056479rab1bb10086.275Danio_rerio
ENSCSAVG00000009147-9988.119ENSDORG00000002511Rab1b10088.119Dipodomys_ordii
ENSCSAVG00000009147-9990.640ENSEBUG00000015886-9990.640Eptatretus_burgeri
ENSCSAVG00000009147-9988.119ENSEASG00005004933RAB1B10088.119Equus_asinus_asinus
ENSCSAVG00000009147-9988.119ENSEEUG00000013465RAB1B10088.119Erinaceus_europaeus
ENSCSAVG00000009147-9986.139ENSELUG00000023815-10086.139Esox_lucius
ENSCSAVG00000009147-9988.614ENSELUG00000015413rab1ab10088.614Esox_lucius
ENSCSAVG00000009147-9988.614ENSELUG00000012428-10088.614Esox_lucius
ENSCSAVG00000009147-9988.119ENSFCAG00000036658RAB1B10088.119Felis_catus
ENSCSAVG00000009147-9987.624ENSFDAG00000010180-10087.624Fukomys_damarensis
ENSCSAVG00000009147-9988.119ENSFHEG00000014924rab1ba10088.119Fundulus_heteroclitus
ENSCSAVG00000009147-9987.317ENSFHEG00000022985rab1ab10087.317Fundulus_heteroclitus
ENSCSAVG00000009147-9787.129ENSGMOG00000010022-9787.129Gadus_morhua
ENSCSAVG00000009147-9783.092ENSGMOG00000004888rab1ab10087.879Gadus_morhua
ENSCSAVG00000009147-9988.614ENSGMOG00000007293rab1ba9988.614Gadus_morhua
ENSCSAVG00000009147-9988.119ENSGAFG00000019305rab1ba10088.119Gambusia_affinis
ENSCSAVG00000009147-9988.177ENSGAFG00000001289rab1ab10088.177Gambusia_affinis
ENSCSAVG00000009147-9988.670ENSGACG00000019642-9988.670Gasterosteus_aculeatus
ENSCSAVG00000009147-9987.685ENSGACG00000003864rab1ab10087.685Gasterosteus_aculeatus
ENSCSAVG00000009147-9988.670ENSGACG00000000789rab1ba9988.670Gasterosteus_aculeatus
ENSCSAVG00000009147-9987.129ENSGAGG00000023956RAB1B10087.129Gopherus_agassizii
ENSCSAVG00000009147-9787.817ENSGGOG00000009755RAB1B9987.817Gorilla_gorilla
ENSCSAVG00000009147-9085.792ENSGGOG00000023637-9785.792Gorilla_gorilla
ENSCSAVG00000009147-9987.685ENSHBUG00000010304rab1ab10087.685Haplochromis_burtoni
ENSCSAVG00000009147-9988.119ENSHGLG00000009071RAB1B10088.119Heterocephalus_glaber_female
ENSCSAVG00000009147-9988.119ENSHGLG00100006292RAB1B10088.119Heterocephalus_glaber_male
ENSCSAVG00000009147-9988.177ENSHCOG00000001137rab1ab10088.177Hippocampus_comes
ENSCSAVG00000009147-9989.163ENSHCOG00000010023-10089.163Hippocampus_comes
ENSCSAVG00000009147-9988.119ENSHCOG00000019468rab1ba10088.119Hippocampus_comes
ENSCSAVG00000009147-9985.149ENSIPUG00000008650rab1a10085.149Ictalurus_punctatus
ENSCSAVG00000009147-9988.614ENSIPUG00000020508rab1ab10088.614Ictalurus_punctatus
ENSCSAVG00000009147-9988.614ENSIPUG00000017890Rab1A10088.614Ictalurus_punctatus
ENSCSAVG00000009147-9988.119ENSSTOG00000011052RAB1B10088.119Ictidomys_tridecemlineatus
ENSCSAVG00000009147-9988.119ENSJJAG00000016545Rab1b10088.119Jaculus_jaculus
ENSCSAVG00000009147-9987.192ENSKMAG00000017357rab1ab10087.192Kryptolebias_marmoratus
ENSCSAVG00000009147-9989.109ENSKMAG00000006810rab1ba10089.109Kryptolebias_marmoratus
ENSCSAVG00000009147-9988.614ENSLBEG00000021040rab1ba10088.614Labrus_bergylta
ENSCSAVG00000009147-9987.685ENSLBEG00000027781rab1ab10087.685Labrus_bergylta
ENSCSAVG00000009147-9988.614ENSLACG00000012717RAB1B10088.614Latimeria_chalumnae
ENSCSAVG00000009147-9989.163ENSLOCG00000016037rab1ab9989.163Lepisosteus_oculatus
ENSCSAVG00000009147-9988.119ENSLAFG00000021408RAB1B10088.119Loxodonta_africana
ENSCSAVG00000009147-9988.119ENSMFAG00000040560RAB1B10088.119Macaca_fascicularis
ENSCSAVG00000009147-9487.500ENSMMUG00000031202-9187.500Macaca_mulatta
ENSCSAVG00000009147-9988.119ENSMNEG00000032334RAB1B10088.119Macaca_nemestrina
ENSCSAVG00000009147-9988.119ENSMLEG00000040858RAB1B10088.119Mandrillus_leucophaeus
ENSCSAVG00000009147-9788.325ENSMAMG00000001408rab1ba9988.325Mastacembelus_armatus
ENSCSAVG00000009147-9989.604ENSMAMG00000018306-10089.604Mastacembelus_armatus
ENSCSAVG00000009147-9987.685ENSMZEG00005018407rab1ab10087.685Maylandia_zebra
ENSCSAVG00000009147-9988.614ENSMZEG00005009365rab1ba10088.614Maylandia_zebra
ENSCSAVG00000009147-9988.119ENSMICG00000029171RAB1B10088.119Microcebus_murinus
ENSCSAVG00000009147-9987.624ENSMOCG00000014673Rab1b10087.624Microtus_ochrogaster
ENSCSAVG00000009147-9788.325ENSMMOG00000020522rab1ba9988.325Mola_mola
ENSCSAVG00000009147-9987.685ENSMMOG00000007951rab1ab10087.685Mola_mola
ENSCSAVG00000009147-9986.634ENSMODG00000008371-10086.634Monodelphis_domestica
ENSCSAVG00000009147-9966.832ENSMODG00000022797-10066.832Monodelphis_domestica
ENSCSAVG00000009147-9987.685ENSMALG00000012003rab1ab10087.685Monopterus_albus
ENSCSAVG00000009147-9989.604ENSMALG00000006985-9989.604Monopterus_albus
ENSCSAVG00000009147-9988.119ENSMALG00000021144rab1ba10088.119Monopterus_albus
ENSCSAVG00000009147-9987.624MGP_CAROLIEiJ_G0022536Rab1b10087.624Mus_caroli
ENSCSAVG00000009147-9987.624ENSMUSG00000024870Rab1b10087.624Mus_musculus
ENSCSAVG00000009147-9987.624MGP_PahariEiJ_G0014033Rab1b10087.624Mus_pahari
ENSCSAVG00000009147-9987.624MGP_SPRETEiJ_G0023450Rab1b10087.624Mus_spretus
ENSCSAVG00000009147-9988.060ENSMPUG00000011305RAB1B9588.060Mustela_putorius_furo
ENSCSAVG00000009147-9987.624ENSNGAG00000015910Rab1b10087.624Nannospalax_galili
ENSCSAVG00000009147-9988.614ENSNBRG00000003873rab1ba10088.614Neolamprologus_brichardi
ENSCSAVG00000009147-9988.119ENSNLEG00000006058RAB1B10088.119Nomascus_leucogenys
ENSCSAVG00000009147-6598.485ENSMEUG00000000603-10098.485Notamacropus_eugenii
ENSCSAVG00000009147-7493.377ENSMEUG00000000023RAB1B10093.377Notamacropus_eugenii
ENSCSAVG00000009147-9988.119ENSODEG00000017847-10088.119Octodon_degus
ENSCSAVG00000009147-9988.177ENSONIG00000002065rab1ba9988.177Oreochromis_niloticus
ENSCSAVG00000009147-9987.129ENSORLG00000028104rab1ab10087.129Oryzias_latipes
ENSCSAVG00000009147-9989.109ENSORLG00000021846-10089.109Oryzias_latipes
ENSCSAVG00000009147-9987.129ENSORLG00020000892rab1ab10087.129Oryzias_latipes_hni
ENSCSAVG00000009147-9989.109ENSORLG00020021697-10089.109Oryzias_latipes_hni
ENSCSAVG00000009147-9989.109ENSORLG00015000618-10089.109Oryzias_latipes_hsok
ENSCSAVG00000009147-9987.129ENSORLG00015010986rab1ab10087.129Oryzias_latipes_hsok
ENSCSAVG00000009147-9987.685ENSOMEG00000006036rab1ab10087.685Oryzias_melastigma
ENSCSAVG00000009147-9989.604ENSOMEG00000009074-10089.604Oryzias_melastigma
ENSCSAVG00000009147-9988.119ENSOGAG00000028013RAB1B10088.119Otolemur_garnettii
ENSCSAVG00000009147-9777.578ENSOARG00000003523RAB1B7277.578Ovis_aries
ENSCSAVG00000009147-9988.119ENSPPAG00000041445RAB1B10088.119Pan_paniscus
ENSCSAVG00000009147-9988.119ENSPPRG00000010280-10088.119Panthera_pardus
ENSCSAVG00000009147-9986.567ENSPTIG00000011013RAB1B8986.567Panthera_tigris_altaica
ENSCSAVG00000009147-9988.119ENSPTRG00000003915RAB1B10088.119Pan_troglodytes
ENSCSAVG00000009147-9988.119ENSPANG00000033073RAB1B10088.119Papio_anubis
ENSCSAVG00000009147-9989.109ENSPKIG00000016450rab1ba10089.109Paramormyrops_kingsleyae
ENSCSAVG00000009147-9989.163ENSPKIG00000004714rab1ab9989.163Paramormyrops_kingsleyae
ENSCSAVG00000009147-9989.604ENSPKIG00000005049-10089.604Paramormyrops_kingsleyae
ENSCSAVG00000009147-9787.817ENSPKIG00000003902RAB1B9287.817Paramormyrops_kingsleyae
ENSCSAVG00000009147-9988.614ENSPMGG00000014406rab1ba10088.614Periophthalmus_magnuspinnatus
ENSCSAVG00000009147-9990.686ENSPMAG00000001801rab1ba9990.686Petromyzon_marinus
ENSCSAVG00000009147-9986.634ENSPCIG00000008407RAB1B10086.634Phascolarctos_cinereus
ENSCSAVG00000009147-9987.685ENSPFOG00000001829rab1ab10087.685Poecilia_formosa
ENSCSAVG00000009147-9988.177ENSPFOG00000012594rab1ba9488.177Poecilia_formosa
ENSCSAVG00000009147-9987.685ENSPLAG00000006520rab1ab10087.685Poecilia_latipinna
ENSCSAVG00000009147-9988.119ENSPLAG00000018655rab1ba10088.119Poecilia_latipinna
ENSCSAVG00000009147-9987.685ENSPMEG00000003046rab1ab10087.685Poecilia_mexicana
ENSCSAVG00000009147-9988.119ENSPMEG00000002054rab1ba10088.119Poecilia_mexicana
ENSCSAVG00000009147-9987.685ENSPREG00000020321rab1ab10087.685Poecilia_reticulata
ENSCSAVG00000009147-9988.119ENSPREG00000003616rab1ba10088.119Poecilia_reticulata
ENSCSAVG00000009147-10086.275ENSPREG00000004889-9886.275Poecilia_reticulata
ENSCSAVG00000009147-9988.119ENSPCAG00000015578RAB1B10088.119Procavia_capensis
ENSCSAVG00000009147-9988.119ENSPCOG00000025845RAB1B10088.119Propithecus_coquereli
ENSCSAVG00000009147-9987.685ENSPNYG00000009172rab1ab10087.685Pundamilia_nyererei
ENSCSAVG00000009147-9988.614ENSPNYG00000010377rab1ba10088.614Pundamilia_nyererei
ENSCSAVG00000009147-9988.119ENSPNAG00000012540-10088.119Pygocentrus_nattereri
ENSCSAVG00000009147-9788.832ENSPNAG00000013863rab1ab8988.832Pygocentrus_nattereri
ENSCSAVG00000009147-9988.614ENSPNAG00000013004rab1ba10088.614Pygocentrus_nattereri
ENSCSAVG00000009147-9987.624ENSRNOG00000050510LOC10255516710087.624Rattus_norvegicus
ENSCSAVG00000009147-9784.772ENSRBIG00000037235-9884.772Rhinopithecus_bieti
ENSCSAVG00000009147-9988.119ENSRBIG00000035442RAB1B10088.119Rhinopithecus_bieti
ENSCSAVG00000009147-9988.119ENSRROG00000030008RAB1B10088.119Rhinopithecus_roxellana
ENSCSAVG00000009147-9988.119ENSSBOG00000033554RAB1B10088.119Saimiri_boliviensis_boliviensis
ENSCSAVG00000009147-9786.294ENSSHAG00000010376-9886.294Sarcophilus_harrisii
ENSCSAVG00000009147-9988.614ENSSFOG00015020836rab1ba10088.614Scleropages_formosus
ENSCSAVG00000009147-9989.163ENSSFOG00015011140-9989.163Scleropages_formosus
ENSCSAVG00000009147-9988.614ENSSFOG00015001293rab1ab10088.614Scleropages_formosus
ENSCSAVG00000009147-9988.614ENSSMAG00000009201rab1ba10088.614Scophthalmus_maximus
ENSCSAVG00000009147-9988.177ENSSMAG00000017528rab1ab10088.177Scophthalmus_maximus
ENSCSAVG00000009147-9986.139ENSSDUG00000016888rab1ab9386.139Seriola_dumerili
ENSCSAVG00000009147-9988.119ENSSDUG00000004698rab1ba10088.119Seriola_dumerili
ENSCSAVG00000009147-9987.624ENSSLDG00000011757-9989.340Seriola_lalandi_dorsalis
ENSCSAVG00000009147-9987.685ENSSLDG00000018942rab1ab10087.685Seriola_lalandi_dorsalis
ENSCSAVG00000009147-9988.614ENSSLDG00000012251rab1ba10088.614Seriola_lalandi_dorsalis
ENSCSAVG00000009147-9988.119ENSSPUG00000007945RAB1B10088.119Sphenodon_punctatus
ENSCSAVG00000009147-9292.513ENSSPAG00000015564rab1ab8391.053Stegastes_partitus
ENSCSAVG00000009147-9988.614ENSSPAG00000022676rab1ba10088.614Stegastes_partitus
ENSCSAVG00000009147-9988.119ENSSSCG00000012954RAB1B9793.296Sus_scrofa
ENSCSAVG00000009147-9988.614ENSTRUG00000004287rab1ba10088.614Takifugu_rubripes
ENSCSAVG00000009147-9787.374ENSTRUG00000023164rab1ab9887.374Takifugu_rubripes
ENSCSAVG00000009147-7895.597ENSTNIG00000004511-9995.597Tetraodon_nigroviridis
ENSCSAVG00000009147-6392.188ENSTBEG00000004630RAB1B9692.188Tupaia_belangeri
ENSCSAVG00000009147-9988.119ENSTTRG00000014408RAB1B10088.119Tursiops_truncatus
ENSCSAVG00000009147-9988.119ENSUAMG00000021114RAB1B10088.119Ursus_americanus
ENSCSAVG00000009147-9986.567ENSUMAG00000011180RAB1B9086.567Ursus_maritimus
ENSCSAVG00000009147-9787.817ENSVVUG00000027023-9087.817Vulpes_vulpes
ENSCSAVG00000009147-9990.099ENSXETG00000014011rab1a10090.099Xenopus_tropicalis
ENSCSAVG00000009147-9987.685ENSXCOG00000013842rab1ab10087.685Xiphophorus_couchianus
ENSCSAVG00000009147-8494.767ENSXCOG00000010770-6994.767Xiphophorus_couchianus
ENSCSAVG00000009147-9988.119ENSXMAG00000022299rab1ba10088.119Xiphophorus_maculatus
ENSCSAVG00000009147-9987.685ENSXMAG00000005757rab1ab10087.685Xiphophorus_maculatus

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