EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009201 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7785 bases
Position: chrreftig_0:1821802-1829586
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015653	Paf67	PF10255.9	7e-160	1	1
ENSCSAVP00000015654	Paf67	PF10255.9	7.1e-160	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015833	-	1650	-	ENSCSAVP00000015654	535 (aa)	-	H2ZDI8
ENSCSAVT00000015832	-	1849	-	ENSCSAVP00000015653	534 (aa)	-	H2ZDI7

Gene Model

Click here to download ENSCSAVG00000009201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009201	-	96	60.256	ENSG00000100129	EIF3L	94	64.640	Homo_sapiens
ENSCSAVG00000009201	-	98	60.398	ENSAPOG00000020695	eif3s6ip	95	60.398	Acanthochromis_polyacanthus
ENSCSAVG00000009201	-	96	60.256	ENSAMEG00000010267	EIF3L	89	60.256	Ailuropoda_melanoleuca
ENSCSAVG00000009201	-	98	60.579	ENSACIG00000004431	eif3s6ip	95	60.579	Amphilophus_citrinellus
ENSCSAVG00000009201	-	98	60.398	ENSAOCG00000021732	eif3s6ip	95	60.398	Amphiprion_ocellaris
ENSCSAVG00000009201	-	98	60.398	ENSAPEG00000024616	eif3s6ip	95	60.398	Amphiprion_percula
ENSCSAVG00000009201	-	98	60.579	ENSATEG00000013143	eif3s6ip	95	60.579	Anabas_testudineus
ENSCSAVG00000009201	-	95	60.444	ENSAPLG00000015281	EIF3L	99	60.444	Anas_platyrhynchos
ENSCSAVG00000009201	-	95	59.889	ENSACAG00000015371	EIF3L	97	59.889	Anolis_carolinensis
ENSCSAVG00000009201	-	96	47.495	ENSANAG00000020611	-	99	48.231	Aotus_nancymaae
ENSCSAVG00000009201	-	96	56.593	ENSANAG00000028227	-	94	60.135	Aotus_nancymaae
ENSCSAVG00000009201	-	98	60.579	ENSACLG00000021594	eif3s6ip	95	60.579	Astatotilapia_calliptera
ENSCSAVG00000009201	-	98	60.469	ENSAMXG00000003073	eif3s6ip	95	60.469	Astyanax_mexicanus
ENSCSAVG00000009201	-	96	60.256	ENSBTAG00000010790	EIF3L	96	60.256	Bos_taurus
ENSCSAVG00000009201	-	93	43.026	WBGene00015920	eif-3.L	99	43.205	Caenorhabditis_elegans
ENSCSAVG00000009201	-	96	60.256	ENSCJAG00000038841	-	98	60.313	Callithrix_jacchus
ENSCSAVG00000009201	-	66	61.620	ENSCJAG00000012225	-	74	73.077	Callithrix_jacchus
ENSCSAVG00000009201	-	96	60.256	ENSCAFG00000001443	EIF3L	96	60.256	Canis_familiaris
ENSCSAVG00000009201	-	96	60.256	ENSCAFG00020003202	-	88	60.256	Canis_lupus_dingo
ENSCSAVG00000009201	-	96	60.256	ENSCAFG00020003701	-	90	60.256	Canis_lupus_dingo
ENSCSAVG00000009201	-	75	57.471	ENSCAFG00020021941	-	92	57.471	Canis_lupus_dingo
ENSCSAVG00000009201	-	96	59.743	ENSCAFG00020004232	-	96	59.707	Canis_lupus_dingo
ENSCSAVG00000009201	-	96	60.256	ENSCHIG00000014325	EIF3L	96	60.256	Capra_hircus
ENSCSAVG00000009201	-	81	64.853	ENSTSYG00000002006	-	99	64.853	Carlito_syrichta
ENSCSAVG00000009201	-	62	50.882	ENSTSYG00000026953	-	99	50.882	Carlito_syrichta
ENSCSAVG00000009201	-	68	62.331	ENSCAPG00000010140	-	82	62.398	Cavia_aperea
ENSCSAVG00000009201	-	95	57.514	ENSCAPG00000012468	-	97	57.514	Cavia_aperea
ENSCSAVG00000009201	-	60	55.963	ENSCAPG00000011772	-	88	55.963	Cavia_aperea
ENSCSAVG00000009201	-	60	55.455	ENSCPOG00000035371	-	88	55.455	Cavia_porcellus
ENSCSAVG00000009201	-	96	60.256	ENSCPOG00000005885	-	96	60.256	Cavia_porcellus
ENSCSAVG00000009201	-	68	52.022	ENSCPOG00000033219	-	99	52.011	Cavia_porcellus
ENSCSAVG00000009201	-	96	60.073	ENSCCAG00000034054	-	90	60.073	Cebus_capucinus
ENSCSAVG00000009201	-	96	56.410	ENSCCAG00000023543	-	95	52.930	Cebus_capucinus
ENSCSAVG00000009201	-	96	60.073	ENSCATG00000037073	EIF3L	94	64.414	Cercocebus_atys
ENSCSAVG00000009201	-	96	60.256	ENSCLAG00000016779	EIF3L	96	60.256	Chinchilla_lanigera
ENSCSAVG00000009201	-	53	60.751	ENSCSAG00000006903	EIF3L	96	60.751	Chlorocebus_sabaeus
ENSCSAVG00000009201	-	96	57.509	ENSCHOG00000009237	EIF3L	89	57.509	Choloepus_hoffmanni
ENSCSAVG00000009201	-	98	59.605	ENSCPBG00000023050	EIF3L	98	59.605	Chrysemys_picta_bellii
ENSCSAVG00000009201	-	93	92.510	ENSCING00000014830	-	99	92.510	Ciona_intestinalis
ENSCSAVG00000009201	-	69	50.681	ENSCANG00000018914	-	97	50.681	Colobus_angolensis_palliatus
ENSCSAVG00000009201	-	87	63.848	ENSCANG00000035707	EIF3L	84	63.848	Colobus_angolensis_palliatus
ENSCSAVG00000009201	-	96	60.256	ENSCGRG00001020655	Eif3l	96	60.256	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009201	-	96	60.256	ENSCGRG00000014127	Eif3l	96	60.256	Cricetulus_griseus_crigri
ENSCSAVG00000009201	-	99	59.571	ENSCSEG00000017526	eif3s6ip	96	59.964	Cynoglossus_semilaevis
ENSCSAVG00000009201	-	98	60.759	ENSCVAG00000001269	eif3s6ip	95	60.759	Cyprinodon_variegatus
ENSCSAVG00000009201	-	98	60.469	ENSDARG00000101082	eif3s6ip	94	60.469	Danio_rerio
ENSCSAVG00000009201	-	57	60.645	ENSDNOG00000047382	EIF3L	93	60.645	Dasypus_novemcinctus
ENSCSAVG00000009201	-	69	62.032	ENSDORG00000009478	Eif3l	97	62.032	Dipodomys_ordii
ENSCSAVG00000009201	-	97	51.032	FBgn0036258	eIF3l	98	51.032	Drosophila_melanogaster
ENSCSAVG00000009201	-	93	42.694	ENSETEG00000006051	EIF3L	85	43.074	Echinops_telfairi
ENSCSAVG00000009201	-	95	57.116	ENSEBUG00000003610	eif3s6ip	90	57.116	Eptatretus_burgeri
ENSCSAVG00000009201	-	78	64.387	ENSEASG00005018809	EIF3L	93	64.387	Equus_asinus_asinus
ENSCSAVG00000009201	-	96	60.256	ENSECAG00000015150	EIF3L	96	60.256	Equus_caballus
ENSCSAVG00000009201	-	96	59.890	ENSEEUG00000004697	EIF3L	97	59.890	Erinaceus_europaeus
ENSCSAVG00000009201	-	96	61.255	ENSELUG00000010629	eif3s6ip	93	61.255	Esox_lucius
ENSCSAVG00000009201	-	96	60.256	ENSFCAG00000028972	EIF3L	94	64.640	Felis_catus
ENSCSAVG00000009201	-	98	60.036	ENSFALG00000012768	EIF3L	96	60.036	Ficedula_albicollis
ENSCSAVG00000009201	-	96	60.256	ENSFDAG00000012066	-	96	60.256	Fukomys_damarensis
ENSCSAVG00000009201	-	98	60.682	ENSFHEG00000019137	eif3s6ip	96	60.682	Fundulus_heteroclitus
ENSCSAVG00000009201	-	97	60.838	ENSGMOG00000008725	eif3s6ip	97	60.838	Gadus_morhua
ENSCSAVG00000009201	-	98	60.036	ENSGALG00000012296	EIF3L	96	60.036	Gallus_gallus
ENSCSAVG00000009201	-	98	60.759	ENSGAFG00000017801	eif3s6ip	96	60.650	Gambusia_affinis
ENSCSAVG00000009201	-	96	60.662	ENSGACG00000003516	eif3s6ip	93	60.662	Gasterosteus_aculeatus
ENSCSAVG00000009201	-	98	59.425	ENSGAGG00000021753	EIF3L	98	59.425	Gopherus_agassizii
ENSCSAVG00000009201	-	96	60.256	ENSGGOG00000027682	EIF3L	94	64.640	Gorilla_gorilla
ENSCSAVG00000009201	-	98	60.579	ENSHBUG00000010950	eif3s6ip	95	60.579	Haplochromis_burtoni
ENSCSAVG00000009201	-	96	60.256	ENSHGLG00000010378	EIF3L	96	60.256	Heterocephalus_glaber_female
ENSCSAVG00000009201	-	96	60.256	ENSHGLG00100017773	EIF3L	96	60.256	Heterocephalus_glaber_male
ENSCSAVG00000009201	-	98	59.820	ENSHCOG00000004022	eif3s6ip	96	59.820	Hippocampus_comes
ENSCSAVG00000009201	-	97	61.384	ENSIPUG00000019522	eif3l	95	61.384	Ictalurus_punctatus
ENSCSAVG00000009201	-	69	61.765	ENSJJAG00000009583	Eif3l	97	61.765	Jaculus_jaculus
ENSCSAVG00000009201	-	65	61.765	ENSJJAG00000004937	-	76	61.765	Jaculus_jaculus
ENSCSAVG00000009201	-	96	61.624	ENSKMAG00000008795	eif3s6ip	94	61.624	Kryptolebias_marmoratus
ENSCSAVG00000009201	-	99	60.142	ENSLBEG00000013052	eif3s6ip	95	60.142	Labrus_bergylta
ENSCSAVG00000009201	-	96	58.748	ENSLACG00000002387	EIF3L	96	58.640	Latimeria_chalumnae
ENSCSAVG00000009201	-	96	61.255	ENSLOCG00000016195	eif3s6ip	93	61.255	Lepisosteus_oculatus
ENSCSAVG00000009201	-	96	60.256	ENSLAFG00000001516	EIF3L	96	60.256	Loxodonta_africana
ENSCSAVG00000009201	-	96	60.256	ENSMFAG00000040574	EIF3L	94	64.640	Macaca_fascicularis
ENSCSAVG00000009201	-	96	60.256	ENSMMUG00000019785	EIF3L	94	64.640	Macaca_mulatta
ENSCSAVG00000009201	-	96	60.256	ENSMNEG00000030385	EIF3L	94	64.640	Macaca_nemestrina
ENSCSAVG00000009201	-	69	49.319	ENSMNEG00000033174	-	97	49.319	Macaca_nemestrina
ENSCSAVG00000009201	-	96	60.256	ENSMLEG00000040794	EIF3L	94	64.640	Mandrillus_leucophaeus
ENSCSAVG00000009201	-	98	60.579	ENSMAMG00000015713	eif3s6ip	95	60.579	Mastacembelus_armatus
ENSCSAVG00000009201	-	98	60.579	ENSMZEG00005010929	eif3s6ip	95	60.579	Maylandia_zebra
ENSCSAVG00000009201	-	98	60.036	ENSMGAG00000012482	EIF3L	94	60.036	Meleagris_gallopavo
ENSCSAVG00000009201	-	96	60.256	ENSMAUG00000003954	Eif3l	96	60.256	Mesocricetus_auratus
ENSCSAVG00000009201	-	96	59.239	ENSMICG00000013090	-	97	58.838	Microcebus_murinus
ENSCSAVG00000009201	-	96	59.341	ENSMICG00000035434	-	93	61.067	Microcebus_murinus
ENSCSAVG00000009201	-	96	60.256	ENSMOCG00000012256	Eif3l	96	60.256	Microtus_ochrogaster
ENSCSAVG00000009201	-	91	59.768	ENSMMOG00000008532	eif3s6ip	97	59.768	Mola_mola
ENSCSAVG00000009201	-	96	59.707	ENSMODG00000019068	EIF3L	95	59.707	Monodelphis_domestica
ENSCSAVG00000009201	-	96	60.878	ENSMALG00000007109	eif3s6ip	94	60.878	Monopterus_albus
ENSCSAVG00000009201	-	96	60.256	MGP_CAROLIEiJ_G0020003	Eif3l	96	60.256	Mus_caroli
ENSCSAVG00000009201	-	96	59.707	ENSMUSG00000033047	Eif3l	96	59.707	Mus_musculus
ENSCSAVG00000009201	-	96	60.256	MGP_PahariEiJ_G0020005	Eif3l	96	60.256	Mus_pahari
ENSCSAVG00000009201	-	96	60.256	MGP_SPRETEiJ_G0020901	Eif3l	96	60.256	Mus_spretus
ENSCSAVG00000009201	-	96	60.256	ENSMPUG00000012918	EIF3L	89	60.256	Mustela_putorius_furo
ENSCSAVG00000009201	-	96	58.242	ENSMLUG00000028617	EIF3L	89	58.242	Myotis_lucifugus
ENSCSAVG00000009201	-	96	60.256	ENSNGAG00000015312	Eif3l	96	60.256	Nannospalax_galili
ENSCSAVG00000009201	-	98	60.579	ENSNBRG00000016162	eif3s6ip	95	60.579	Neolamprologus_brichardi
ENSCSAVG00000009201	-	67	51.944	ENSNLEG00000034940	-	99	51.944	Nomascus_leucogenys
ENSCSAVG00000009201	-	96	60.256	ENSNLEG00000014876	EIF3L	94	64.640	Nomascus_leucogenys
ENSCSAVG00000009201	-	96	57.326	ENSOPRG00000013475	EIF3L	90	57.326	Ochotona_princeps
ENSCSAVG00000009201	-	68	61.930	ENSODEG00000012441	EIF3L	85	61.930	Octodon_degus
ENSCSAVG00000009201	-	94	45.785	ENSODEG00000000593	-	92	45.977	Octodon_degus
ENSCSAVG00000009201	-	98	60.579	ENSONIG00000010235	eif3s6ip	95	60.579	Oreochromis_niloticus
ENSCSAVG00000009201	-	96	60.256	ENSOANG00000004150	EIF3L	96	60.256	Ornithorhynchus_anatinus
ENSCSAVG00000009201	-	96	60.073	ENSOCUG00000000941	EIF3L	89	60.073	Oryctolagus_cuniculus
ENSCSAVG00000009201	-	96	60.989	ENSORLG00000013480	eif3s6ip	95	63.032	Oryzias_latipes
ENSCSAVG00000009201	-	96	60.989	ENSORLG00020005796	eif3s6ip	93	60.878	Oryzias_latipes_hni
ENSCSAVG00000009201	-	96	60.989	ENSORLG00015021045	eif3s6ip	93	60.878	Oryzias_latipes_hsok
ENSCSAVG00000009201	-	98	60.759	ENSOMEG00000017565	eif3s6ip	94	60.759	Oryzias_melastigma
ENSCSAVG00000009201	-	96	53.663	ENSOGAG00000026518	-	95	53.663	Otolemur_garnettii
ENSCSAVG00000009201	-	82	65.022	ENSOGAG00000029444	-	93	65.022	Otolemur_garnettii
ENSCSAVG00000009201	-	82	64.574	ENSOGAG00000030790	-	93	64.574	Otolemur_garnettii
ENSCSAVG00000009201	-	96	60.256	ENSOARG00000014439	EIF3L	93	60.256	Ovis_aries
ENSCSAVG00000009201	-	96	60.256	ENSPPAG00000035942	EIF3L	94	64.640	Pan_paniscus
ENSCSAVG00000009201	-	96	60.256	ENSPPRG00000016342	EIF3L	94	64.640	Panthera_pardus
ENSCSAVG00000009201	-	96	60.256	ENSPTIG00000013809	EIF3L	94	64.640	Panthera_tigris_altaica
ENSCSAVG00000009201	-	96	60.256	ENSPTRG00000014352	EIF3L	94	64.640	Pan_troglodytes
ENSCSAVG00000009201	-	96	60.256	ENSPANG00000020963	EIF3L	94	64.640	Papio_anubis
ENSCSAVG00000009201	-	99	59.574	ENSPKIG00000016998	eif3s6ip	99	59.885	Paramormyrops_kingsleyae
ENSCSAVG00000009201	-	54	60.606	ENSPSIG00000013455	-	99	60.606	Pelodiscus_sinensis
ENSCSAVG00000009201	-	95	61.111	ENSPMGG00000001439	eif3s6ip	93	61.111	Periophthalmus_magnuspinnatus
ENSCSAVG00000009201	-	96	60.256	ENSPEMG00000009678	Eif3l	96	60.256	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009201	-	57	61.935	ENSPMAG00000005390	eif3s6ip	96	62.013	Petromyzon_marinus
ENSCSAVG00000009201	-	53	60.959	ENSPCIG00000002847	-	69	60.959	Phascolarctos_cinereus
ENSCSAVG00000009201	-	97	60.980	ENSPFOG00000013709	eif3s6ip	96	60.980	Poecilia_formosa
ENSCSAVG00000009201	-	98	60.286	ENSPLAG00000021721	eif3s6ip	97	60.286	Poecilia_latipinna
ENSCSAVG00000009201	-	97	60.980	ENSPMEG00000020657	eif3s6ip	96	60.980	Poecilia_mexicana
ENSCSAVG00000009201	-	97	60.980	ENSPREG00000001257	eif3s6ip	96	60.980	Poecilia_reticulata
ENSCSAVG00000009201	-	67	71.429	ENSPPYG00000011806	-	92	71.429	Pongo_abelii
ENSCSAVG00000009201	-	80	64.665	ENSPCAG00000000182	EIF3L	72	64.665	Procavia_capensis
ENSCSAVG00000009201	-	96	60.256	ENSPCOG00000018873	EIF3L	94	64.640	Propithecus_coquereli
ENSCSAVG00000009201	-	96	60.256	ENSPVAG00000010103	EIF3L	89	60.256	Pteropus_vampyrus
ENSCSAVG00000009201	-	98	60.579	ENSPNYG00000012524	eif3s6ip	95	60.579	Pundamilia_nyererei
ENSCSAVG00000009201	-	98	58.559	ENSPNAG00000015976	eif3s6ip	97	58.951	Pygocentrus_nattereri
ENSCSAVG00000009201	-	69	62.133	ENSRNOG00000011020	Eif3l	96	62.133	Rattus_norvegicus
ENSCSAVG00000009201	-	90	48.627	ENSRBIG00000041537	EIF3L	93	48.423	Rhinopithecus_bieti
ENSCSAVG00000009201	-	96	60.256	ENSRROG00000043597	EIF3L	94	64.640	Rhinopithecus_roxellana
ENSCSAVG00000009201	-	96	56.204	ENSSBOG00000031850	EIF3L	98	61.155	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009201	-	96	60.256	ENSSHAG00000008892	EIF3L	95	60.256	Sarcophilus_harrisii
ENSCSAVG00000009201	-	83	62.313	ENSSFOG00015003021	eif3s6ip	96	62.313	Scleropages_formosus
ENSCSAVG00000009201	-	97	60.838	ENSSMAG00000012105	eif3s6ip	95	60.838	Scophthalmus_maximus
ENSCSAVG00000009201	-	95	60.998	ENSSDUG00000004810	eif3s6ip	93	60.998	Seriola_dumerili
ENSCSAVG00000009201	-	97	60.799	ENSSLDG00000023604	eif3s6ip	96	60.799	Seriola_lalandi_dorsalis
ENSCSAVG00000009201	-	96	58.791	ENSSPUG00000011468	EIF3L	95	58.791	Sphenodon_punctatus
ENSCSAVG00000009201	-	98	60.579	ENSSPAG00000021764	eif3s6ip	95	60.579	Stegastes_partitus
ENSCSAVG00000009201	-	97	61.610	ENSSSCG00000000119	EIF3L	96	60.256	Sus_scrofa
ENSCSAVG00000009201	-	98	60.036	ENSTGUG00000010488	-	94	60.036	Taeniopygia_guttata
ENSCSAVG00000009201	-	96	61.626	ENSTRUG00000017695	eif3s6ip	95	61.626	Takifugu_rubripes
ENSCSAVG00000009201	-	96	60.695	ENSTNIG00000013105	eif3s6ip	94	60.695	Tetraodon_nigroviridis
ENSCSAVG00000009201	-	95	59.926	ENSTBEG00000003067	EIF3L	88	59.926	Tupaia_belangeri
ENSCSAVG00000009201	-	95	60.409	ENSTTRG00000004812	EIF3L	89	60.409	Tursiops_truncatus
ENSCSAVG00000009201	-	96	60.256	ENSUAMG00000020498	EIF3L	96	60.256	Ursus_americanus
ENSCSAVG00000009201	-	96	60.256	ENSUMAG00000015166	EIF3L	96	60.256	Ursus_maritimus
ENSCSAVG00000009201	-	96	60.256	ENSVVUG00000024013	EIF3L	96	60.256	Vulpes_vulpes
ENSCSAVG00000009201	-	98	59.498	ENSXETG00000027274	eif3l	98	59.498	Xenopus_tropicalis
ENSCSAVG00000009201	-	95	61.039	ENSXCOG00000003475	eif3s6ip	94	61.039	Xiphophorus_couchianus
ENSCSAVG00000009201	-	98	60.759	ENSXMAG00000004578	eif3s6ip	95	60.759	Xiphophorus_maculatus