EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009212 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 10707 bases
Position: chrreftig_14:109639-120345
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015673	DEAD	PF00270.29	7.2e-09	1	1
ENSCSAVP00000015674	DEAD	PF00270.29	7.2e-09	1	1
ENSCSAVP00000015675	DEAD	PF00270.29	7.5e-09	1	1
ENSCSAVP00000015673	HA2	PF04408.23	1.7e-20	1	1
ENSCSAVP00000015675	HA2	PF04408.23	1.8e-20	1	1
ENSCSAVP00000015674	HA2	PF04408.23	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015854	-	3336	-	ENSCSAVP00000015675	1112 (aa)	-	H2ZDK9
ENSCSAVT00000015851	-	301	-	ENSCSAVP00000015672	84 (aa)	-	H2ZDK6
ENSCSAVT00000015853	-	3429	-	ENSCSAVP00000015674	1115 (aa)	-	H2ZDK8
ENSCSAVT00000015852	-	3481	-	ENSCSAVP00000015673	1110 (aa)	-	H2ZDK7

Gene Model

Click here to download ENSCSAVG00000009212's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009212's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009212	-	64	42.915	ENSCSAVG00000002918	-	55	42.915
ENSCSAVG00000009212	-	64	40.625	ENSCSAVG00000001117	-	97	41.270
ENSCSAVG00000009212	-	70	37.919	ENSCSAVG00000003870	-	73	41.935
ENSCSAVG00000009212	-	53	32.302	ENSCSAVG00000009685	-	85	37.209

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009212	-	84	51.640	ENSG00000150990	DHX37	94	51.499	Homo_sapiens
ENSCSAVG00000009212	-	100	47.926	ENSAPOG00000021493	dhx37	99	47.567	Acanthochromis_polyacanthus
ENSCSAVG00000009212	-	100	47.480	ENSAMEG00000015543	DHX37	96	47.690	Ailuropoda_melanoleuca
ENSCSAVG00000009212	-	100	48.264	ENSACIG00000006590	dhx37	96	48.493	Amphilophus_citrinellus
ENSCSAVG00000009212	-	100	47.986	ENSAOCG00000015168	dhx37	96	47.811	Amphiprion_ocellaris
ENSCSAVG00000009212	-	100	47.891	ENSAPEG00000017509	dhx37	97	47.845	Amphiprion_percula
ENSCSAVG00000009212	-	100	46.827	ENSATEG00000020638	dhx37	96	48.376	Anabas_testudineus
ENSCSAVG00000009212	-	100	48.843	ENSAPLG00000009562	DHX37	99	49.118	Anas_platyrhynchos
ENSCSAVG00000009212	-	99	42.217	ENSACAG00000014642	DHX37	97	47.979	Anolis_carolinensis
ENSCSAVG00000009212	-	92	44.399	ENSANAG00000034653	-	96	46.072	Aotus_nancymaae
ENSCSAVG00000009212	-	83	50.427	ENSANAG00000023048	-	96	47.054	Aotus_nancymaae
ENSCSAVG00000009212	-	99	48.325	ENSACLG00000011192	dhx37	99	48.197	Astatotilapia_calliptera
ENSCSAVG00000009212	-	84	52.081	ENSAMXG00000006130	dhx37	96	48.077	Astyanax_mexicanus
ENSCSAVG00000009212	-	100	46.526	ENSBTAG00000020414	DHX37	96	47.582	Bos_taurus
ENSCSAVG00000009212	-	83	42.902	WBGene00015525	rha-2	94	39.267	Caenorhabditis_elegans
ENSCSAVG00000009212	-	100	46.831	ENSCJAG00000021400	DHX37	94	51.561	Callithrix_jacchus
ENSCSAVG00000009212	-	100	46.413	ENSCAFG00000006952	DHX37	96	47.178	Canis_familiaris
ENSCSAVG00000009212	-	100	46.413	ENSCAFG00020012586	DHX37	96	47.178	Canis_lupus_dingo
ENSCSAVG00000009212	-	100	47.438	ENSCHIG00000019152	DHX37	96	47.860	Capra_hircus
ENSCSAVG00000009212	-	81	51.803	ENSTSYG00000028383	DHX37	96	51.983	Carlito_syrichta
ENSCSAVG00000009212	-	100	45.808	ENSCAPG00000017032	DHX37	96	46.719	Cavia_aperea
ENSCSAVG00000009212	-	100	45.903	ENSCPOG00000024675	DHX37	96	46.753	Cavia_porcellus
ENSCSAVG00000009212	-	100	46.919	ENSCCAG00000033656	DHX37	94	50.325	Cebus_capucinus
ENSCSAVG00000009212	-	84	48.677	ENSCATG00000037537	DHX37	96	43.996	Cercocebus_atys
ENSCSAVG00000009212	-	100	46.690	ENSCLAG00000010370	DHX37	96	47.804	Chinchilla_lanigera
ENSCSAVG00000009212	-	100	46.485	ENSCSAG00000001977	DHX37	96	47.815	Chlorocebus_sabaeus
ENSCSAVG00000009212	-	100	48.007	ENSCPBG00000024888	DHX37	97	49.566	Chrysemys_picta_bellii
ENSCSAVG00000009212	-	100	72.014	ENSCING00000001153	-	97	72.372	Ciona_intestinalis
ENSCSAVG00000009212	-	87	48.020	ENSCANG00000032521	DHX37	95	50.063	Colobus_angolensis_palliatus
ENSCSAVG00000009212	-	100	46.897	ENSCGRG00001014560	Dhx37	96	47.845	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009212	-	100	46.897	ENSCGRG00000011701	Dhx37	96	47.933	Cricetulus_griseus_crigri
ENSCSAVG00000009212	-	83	42.049	ENSCSEG00000018466	-	97	43.554	Cynoglossus_semilaevis
ENSCSAVG00000009212	-	100	46.992	ENSCSEG00000019728	dhx37	96	47.415	Cynoglossus_semilaevis
ENSCSAVG00000009212	-	99	48.584	ENSCVAG00000018153	dhx37	96	48.556	Cyprinodon_variegatus
ENSCSAVG00000009212	-	99	47.285	ENSDARG00000062612	dhx37	96	47.391	Danio_rerio
ENSCSAVG00000009212	-	100	44.025	ENSDNOG00000003434	DHX37	96	44.590	Dasypus_novemcinctus
ENSCSAVG00000009212	-	100	47.615	ENSDORG00000012965	Dhx37	97	48.327	Dipodomys_ordii
ENSCSAVG00000009212	-	100	44.416	FBgn0001330	kz	96	43.750	Drosophila_melanogaster
ENSCSAVG00000009212	-	100	41.147	ENSEBUG00000013468	dhx37	96	41.186	Eptatretus_burgeri
ENSCSAVG00000009212	-	100	45.599	ENSEASG00005013134	DHX37	96	45.671	Equus_asinus_asinus
ENSCSAVG00000009212	-	100	46.201	ENSECAG00000007404	DHX37	96	46.790	Equus_caballus
ENSCSAVG00000009212	-	99	48.194	ENSELUG00000008988	dhx37	96	48.077	Esox_lucius
ENSCSAVG00000009212	-	100	47.069	ENSFCAG00000014583	DHX37	96	51.249	Felis_catus
ENSCSAVG00000009212	-	84	52.165	ENSFALG00000009403	DHX37	99	49.297	Ficedula_albicollis
ENSCSAVG00000009212	-	100	47.469	ENSFDAG00000009235	DHX37	97	47.359	Fukomys_damarensis
ENSCSAVG00000009212	-	100	48.644	ENSFHEG00000018467	dhx37	96	48.514	Fundulus_heteroclitus
ENSCSAVG00000009212	-	100	46.897	ENSGMOG00000011509	dhx37	96	47.489	Gadus_morhua
ENSCSAVG00000009212	-	100	48.544	ENSGALG00000002964	DHX37	97	49.086	Gallus_gallus
ENSCSAVG00000009212	-	99	48.415	ENSGAFG00000000621	dhx37	95	52.066	Gambusia_affinis
ENSCSAVG00000009212	-	99	45.470	ENSGACG00000003927	dhx37	96	46.369	Gasterosteus_aculeatus
ENSCSAVG00000009212	-	100	47.972	ENSGAGG00000007548	DHX37	96	48.450	Gopherus_agassizii
ENSCSAVG00000009212	-	84	51.429	ENSGGOG00000005339	DHX37	96	47.682	Gorilla_gorilla
ENSCSAVG00000009212	-	100	47.652	ENSHBUG00000013916	dhx37	99	48.903	Haplochromis_burtoni
ENSCSAVG00000009212	-	100	46.889	ENSHGLG00000014066	DHX37	96	47.336	Heterocephalus_glaber_female
ENSCSAVG00000009212	-	100	46.960	ENSHGLG00100019104	DHX37	96	47.313	Heterocephalus_glaber_male
ENSCSAVG00000009212	-	100	47.857	ENSHCOG00000005836	dhx37	96	47.672	Hippocampus_comes
ENSCSAVG00000009212	-	99	47.811	ENSIPUG00000025001	DHX37	96	48.028	Ictalurus_punctatus
ENSCSAVG00000009212	-	100	47.502	ENSSTOG00000004784	DHX37	96	47.739	Ictidomys_tridecemlineatus
ENSCSAVG00000009212	-	100	46.466	ENSJJAG00000021254	Dhx37	96	47.048	Jaculus_jaculus
ENSCSAVG00000009212	-	99	48.594	ENSKMAG00000003517	dhx37	96	48.249	Kryptolebias_marmoratus
ENSCSAVG00000009212	-	99	47.589	ENSLBEG00000025303	dhx37	96	48.171	Labrus_bergylta
ENSCSAVG00000009212	-	100	48.183	ENSLACG00000012579	DHX37	96	49.167	Latimeria_chalumnae
ENSCSAVG00000009212	-	74	53.372	ENSLOCG00000001768	dhx37	97	46.300	Lepisosteus_oculatus
ENSCSAVG00000009212	-	100	46.737	ENSLAFG00000004176	DHX37	96	47.469	Loxodonta_africana
ENSCSAVG00000009212	-	100	46.790	ENSMFAG00000037879	DHX37	96	48.035	Macaca_fascicularis
ENSCSAVG00000009212	-	100	46.790	ENSMMUG00000017902	DHX37	96	48.035	Macaca_mulatta
ENSCSAVG00000009212	-	79	49.890	ENSMNEG00000042951	DHX37	93	50.473	Macaca_nemestrina
ENSCSAVG00000009212	-	84	50.265	ENSMLEG00000043019	DHX37	96	46.114	Mandrillus_leucophaeus
ENSCSAVG00000009212	-	100	47.382	ENSMAMG00000014318	dhx37	96	48.038	Mastacembelus_armatus
ENSCSAVG00000009212	-	99	48.236	ENSMZEG00005009802	dhx37	96	48.042	Maylandia_zebra
ENSCSAVG00000009212	-	100	47.727	ENSMGAG00000002630	DHX37	99	48.200	Meleagris_gallopavo
ENSCSAVG00000009212	-	98	47.795	ENSMAUG00000001526	Dhx37	96	47.557	Mesocricetus_auratus
ENSCSAVG00000009212	-	100	47.699	ENSMICG00000005216	DHX37	96	47.573	Microcebus_murinus
ENSCSAVG00000009212	-	100	46.960	ENSMOCG00000003143	Dhx37	96	47.208	Microtus_ochrogaster
ENSCSAVG00000009212	-	100	47.461	ENSMMOG00000012526	dhx37	96	47.673	Mola_mola
ENSCSAVG00000009212	-	92	47.755	ENSMODG00000015681	DHX37	96	48.649	Monodelphis_domestica
ENSCSAVG00000009212	-	100	47.074	ENSMALG00000020684	dhx37	96	46.900	Monopterus_albus
ENSCSAVG00000009212	-	100	47.142	MGP_CAROLIEiJ_G0027766	Dhx37	96	47.731	Mus_caroli
ENSCSAVG00000009212	-	100	46.924	ENSMUSG00000029480	Dhx37	96	47.906	Mus_musculus
ENSCSAVG00000009212	-	100	47.478	MGP_PahariEiJ_G0024346	Dhx37	96	48.049	Mus_pahari
ENSCSAVG00000009212	-	100	46.883	MGP_SPRETEiJ_G0028765	Dhx37	96	47.955	Mus_spretus
ENSCSAVG00000009212	-	97	47.166	ENSMPUG00000001400	DHX37	99	47.345	Mustela_putorius_furo
ENSCSAVG00000009212	-	100	47.135	ENSNGAG00000014443	Dhx37	96	47.837	Nannospalax_galili
ENSCSAVG00000009212	-	99	47.522	ENSNBRG00000019133	dhx37	97	50.526	Neolamprologus_brichardi
ENSCSAVG00000009212	-	84	48.013	ENSNLEG00000002551	DHX37	82	47.987	Nomascus_leucogenys
ENSCSAVG00000009212	-	88	46.957	ENSMEUG00000005092	DHX37	85	47.335	Notamacropus_eugenii
ENSCSAVG00000009212	-	96	44.476	ENSOPRG00000014496	DHX37	91	44.958	Ochotona_princeps
ENSCSAVG00000009212	-	100	47.465	ENSODEG00000009929	DHX37	96	47.739	Octodon_degus
ENSCSAVG00000009212	-	99	48.893	ENSONIG00000014404	dhx37	96	48.504	Oreochromis_niloticus
ENSCSAVG00000009212	-	100	47.401	ENSOANG00000001323	DHX37	99	47.997	Ornithorhynchus_anatinus
ENSCSAVG00000009212	-	100	43.728	ENSOCUG00000008090	DHX37	96	45.018	Oryctolagus_cuniculus
ENSCSAVG00000009212	-	100	48.453	ENSORLG00000002635	dhx37	96	48.961	Oryzias_latipes
ENSCSAVG00000009212	-	99	49.110	ENSORLG00020005608	dhx37	96	48.725	Oryzias_latipes_hni
ENSCSAVG00000009212	-	100	48.099	ENSORLG00015015337	dhx37	96	48.544	Oryzias_latipes_hsok
ENSCSAVG00000009212	-	100	48.203	ENSOMEG00000000674	dhx37	96	48.644	Oryzias_melastigma
ENSCSAVG00000009212	-	100	46.690	ENSOGAG00000010508	DHX37	96	47.437	Otolemur_garnettii
ENSCSAVG00000009212	-	84	47.884	ENSOARG00000017866	-	93	48.397	Ovis_aries
ENSCSAVG00000009212	-	84	51.746	ENSPPAG00000013771	DHX37	96	47.815	Pan_paniscus
ENSCSAVG00000009212	-	100	46.928	ENSPPRG00000005144	DHX37	96	51.128	Panthera_pardus
ENSCSAVG00000009212	-	83	65.143	ENSPTIG00000001223	DHX37	99	65.116	Panthera_tigris_altaica
ENSCSAVG00000009212	-	84	51.746	ENSPTRG00000050780	DHX37	96	47.815	Pan_troglodytes
ENSCSAVG00000009212	-	100	47.038	ENSPANG00000011473	DHX37	96	48.243	Papio_anubis
ENSCSAVG00000009212	-	100	46.270	ENSPKIG00000024671	dhx37	94	49.115	Paramormyrops_kingsleyae
ENSCSAVG00000009212	-	100	47.919	ENSPSIG00000003211	DHX37	98	50.456	Pelodiscus_sinensis
ENSCSAVG00000009212	-	99	47.321	ENSPMGG00000018379	dhx37	96	47.978	Periophthalmus_magnuspinnatus
ENSCSAVG00000009212	-	100	46.809	ENSPEMG00000001822	Dhx37	96	46.997	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009212	-	100	48.511	ENSPCIG00000019185	DHX37	96	48.750	Phascolarctos_cinereus
ENSCSAVG00000009212	-	100	47.069	ENSPFOG00000012138	dhx37	96	47.769	Poecilia_formosa
ENSCSAVG00000009212	-	100	47.346	ENSPLAG00000017487	dhx37	96	47.860	Poecilia_latipinna
ENSCSAVG00000009212	-	100	47.781	ENSPMEG00000004040	dhx37	99	47.807	Poecilia_mexicana
ENSCSAVG00000009212	-	100	47.155	ENSPREG00000011504	dhx37	96	48.031	Poecilia_reticulata
ENSCSAVG00000009212	-	84	49.842	ENSPPYG00000005106	DHX37	97	46.161	Pongo_abelii
ENSCSAVG00000009212	-	96	47.608	ENSPCAG00000008968	DHX37	94	49.660	Procavia_capensis
ENSCSAVG00000009212	-	100	47.354	ENSPCOG00000027512	DHX37	96	50.331	Propithecus_coquereli
ENSCSAVG00000009212	-	100	46.903	ENSPVAG00000008669	DHX37	96	47.590	Pteropus_vampyrus
ENSCSAVG00000009212	-	99	47.392	ENSPNYG00000008298	dhx37	99	48.028	Pundamilia_nyererei
ENSCSAVG00000009212	-	99	47.594	ENSPNAG00000007771	dhx37	96	48.387	Pygocentrus_nattereri
ENSCSAVG00000009212	-	100	47.665	ENSRNOG00000022171	Dhx37	96	47.557	Rattus_norvegicus
ENSCSAVG00000009212	-	100	47.318	ENSRBIG00000043457	DHX37	96	47.660	Rhinopithecus_bieti
ENSCSAVG00000009212	-	100	47.271	ENSRROG00000041401	DHX37	96	47.487	Rhinopithecus_roxellana
ENSCSAVG00000009212	-	81	38.680	YMR128W	ECM16	68	49.593	Saccharomyces_cerevisiae
ENSCSAVG00000009212	-	100	46.908	ENSSBOG00000026565	DHX37	96	47.110	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009212	-	100	48.282	ENSSFOG00015013932	dhx37	96	48.070	Scleropages_formosus
ENSCSAVG00000009212	-	100	47.446	ENSSMAG00000006189	dhx37	96	47.989	Scophthalmus_maximus
ENSCSAVG00000009212	-	100	46.701	ENSSDUG00000002265	dhx37	96	47.906	Seriola_dumerili
ENSCSAVG00000009212	-	100	47.028	ENSSLDG00000003710	dhx37	96	47.853	Seriola_lalandi_dorsalis
ENSCSAVG00000009212	-	84	52.766	ENSSPUG00000013313	DHX37	90	52.766	Sphenodon_punctatus
ENSCSAVG00000009212	-	100	47.110	ENSSPAG00000015538	dhx37	96	47.773	Stegastes_partitus
ENSCSAVG00000009212	-	100	46.288	ENSSSCG00000009758	DHX37	96	46.921	Sus_scrofa
ENSCSAVG00000009212	-	100	44.405	ENSTGUG00000004953	-	99	45.399	Taeniopygia_guttata
ENSCSAVG00000009212	-	75	50.235	ENSTRUG00000016466	dhx37	95	50.058	Takifugu_rubripes
ENSCSAVG00000009212	-	100	47.990	ENSTNIG00000015925	dhx37	96	48.080	Tetraodon_nigroviridis
ENSCSAVG00000009212	-	87	43.636	ENSTTRG00000001648	DHX37	81	47.330	Tursiops_truncatus
ENSCSAVG00000009212	-	100	46.229	ENSUAMG00000003979	DHX37	98	48.984	Ursus_americanus
ENSCSAVG00000009212	-	97	46.415	ENSUMAG00000000800	DHX37	99	47.096	Ursus_maritimus
ENSCSAVG00000009212	-	95	50.000	ENSVVUG00000025832	DHX37	92	47.682	Vulpes_vulpes
ENSCSAVG00000009212	-	85	51.667	ENSXETG00000001202	dhx37	99	51.452	Xenopus_tropicalis
ENSCSAVG00000009212	-	100	48.021	ENSXCOG00000002147	dhx37	96	48.554	Xiphophorus_couchianus
ENSCSAVG00000009212	-	100	47.951	ENSXMAG00000014623	dhx37	96	48.435	Xiphophorus_maculatus